| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027714
Identifier: 238027714
GI number: 238027714
Start: 2321736
End: 2322275
Strand: Reverse
Name: 238027714
Synonym: bglu_1g21350
Alternate gene names: NA
Gene position: 2322275-2321736 (Counterclockwise)
Preceding gene: 238027715
Following gene: 238027713
Centisome position: 59.45
GC content: 67.78
Gene sequence:
>540_bases ATGGCCGATATCGTGACCCGAGGGCAACTGTTCGATTATCAGCGGTATCGCGCGCATTTCACCGAGGTCGAGCCGGGTGC GGTGGCATGGTCGTGGGCTGCGATCGCGGCGCGGCTCGCCGGCTGCGCGCACGGCGAGCGCGGCACCTTCACGCTGAGTG CGGACGGCGCGGCCGCCGGCTGCGAGATTCTGCCCGGCATGGCCGTCAACGTGCAGGTGGTGCAGGCCGGCGCGTCCACG CGGCCGCATGCGCATGCATGGTGGCATCTGTTCGTGGTGCAGTCGGGCAGCGGCACGGCCTATCTCGGCGCCACCGGCGA GGCGGTGGAACTTGCCACGCGCGACTTGCTGCTGGTGCCCGCTTGGTGCGAGCATGCGTTCCAGAGTGATAAAGCGGCGG CGCTCATTTTGTTCAGCATGAGCAACCTGCCGCAACAGACGCGGCTCGGCAACCTGATGGCCCAGGAGCCGACCGATTCC GACGACGTACCGGCGGTCTCGCCTGCCGGAGCAGCTACCTCGACAGGGTCTCATCCATGA
Upstream 100 bases:
>100_bases AGCGTGTTCCCGCACTTTCGCGGCGATCCGCACACCTTTTGCCTGCACGAGGACCCGTTGCCGGGCAAGGCCGTGCGGGC AACACGCAAGGAGGGCTGAG
Downstream 100 bases:
>100_bases GCGCAACGAATCTTCCTTCCGGCAACCTGGCGCAAGGCCGCGGCGACCGATACCGATGGATCGTGCTGGGCGTCGCGGCG CTGGCCCAGACCACGGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MADIVTRGQLFDYQRYRAHFTEVEPGAVAWSWAAIAARLAGCAHGERGTFTLSADGAAAGCEILPGMAVNVQVVQAGAST RPHAHAWWHLFVVQSGSGTAYLGATGEAVELATRDLLLVPAWCEHAFQSDKAAALILFSMSNLPQQTRLGNLMAQEPTDS DDVPAVSPAGAATSTGSHP
Sequences:
>Translated_179_residues MADIVTRGQLFDYQRYRAHFTEVEPGAVAWSWAAIAARLAGCAHGERGTFTLSADGAAAGCEILPGMAVNVQVVQAGAST RPHAHAWWHLFVVQSGSGTAYLGATGEAVELATRDLLLVPAWCEHAFQSDKAAALILFSMSNLPQQTRLGNLMAQEPTDS DDVPAVSPAGAATSTGSHP >Mature_178_residues ADIVTRGQLFDYQRYRAHFTEVEPGAVAWSWAAIAARLAGCAHGERGTFTLSADGAAAGCEILPGMAVNVQVVQAGASTR PHAHAWWHLFVVQSGSGTAYLGATGEAVELATRDLLLVPAWCEHAFQSDKAAALILFSMSNLPQQTRLGNLMAQEPTDSD DVPAVSPAGAATSTGSHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18772; Mature: 18641
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIVTRGQLFDYQRYRAHFTEVEPGAVAWSWAAIAARLAGCAHGERGTFTLSADGAAAG CCCCCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC CEILPGMAVNVQVVQAGASTRPHAHAWWHLFVVQSGSGTAYLGATGEAVELATRDLLLVP CEECCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCEEEECCCCCEEEEECCCEEEEE AWCEHAFQSDKAAALILFSMSNLPQQTRLGNLMAQEPTDSDDVPAVSPAGAATSTGSHP HHHHHHHCCCCCEEEEEEECCCCCCHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADIVTRGQLFDYQRYRAHFTEVEPGAVAWSWAAIAARLAGCAHGERGTFTLSADGAAAG CCCCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC CEILPGMAVNVQVVQAGASTRPHAHAWWHLFVVQSGSGTAYLGATGEAVELATRDLLLVP CEECCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCEEEECCCCCEEEEECCCEEEEE AWCEHAFQSDKAAALILFSMSNLPQQTRLGNLMAQEPTDSDDVPAVSPAGAATSTGSHP HHHHHHHCCCCCEEEEEEECCCCCCHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA