| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027636
Identifier: 238027636
GI number: 238027636
Start: 2248712
End: 2249509
Strand: Reverse
Name: 238027636
Synonym: bglu_1g20570
Alternate gene names: NA
Gene position: 2249509-2248712 (Counterclockwise)
Preceding gene: 238027637
Following gene: 238027635
Centisome position: 57.58
GC content: 67.04
Gene sequence:
>798_bases ATGGCAAAGAATTCGATCGATGCATACGGCGCGAAGGGGAAGGGCAACCTGCTCGACTTCGATCCAGATGACCTGACGCT CGTCGTGGACGAGGCCCACCCGCTGTACGACTCGCGCGTGCACCTTCCGCTCGACGAGGCCATGGTGCGCAACATCGACT TCCAGGGCGTCCTCCAGCCCATCGAGGTGACGAAGAACCCGGAGACCGGGGAAATCGAGGTCGTGACCGGCCGGCAGCGG GTCAAAAACTGCCGTGAGGCGAACCGCCGGCGCCGGGATCGTGGCGACCCGCCGCGGCTGATCCAAGGCTTCGTGCGTCG GCTTGGTCGCGAGGAGCGCGACAAGGTGCTTTCGGCAGCGACGGCCAGCGAGAACGCGATCCGCCAGCAGGAGACGCCGA TTTCTCGCGCCGAAAAAATGGCACGCCAGCTGGCCTACCGCTCGGAAGATGATGTGGCGACGATCTTCGGCTGCACCGTG CAGACCGTGCGAGCCTCCCTCAGCCTGCTCGAATGCTGCGCCGACGTGCAGAAGGCCATCGAGGCCGAGCAGATCAACCT GACGCACGCGAAGGCACTGGCCAAGTTGTCACCCGCCGAGCAGCGCGAGAAGGTGAGGGCGCTTATCGCGGCTGGTTCTG GCGTCAAGGGCCGCGCCAAGGCGGCCGCGCAGCGGGCCGTGATCGACGGCGGCGCGCCCCGGATGCGCTCACGCGCGACG ATCGAGGCGAAGCTGGCGGGGGAGCCTGCGGACAGCGAGTGCGCTGCCACGCTGCGTTGGGTTCTGGGCCAGGATTGA
Upstream 100 bases:
>100_bases GGCGGCCGGCAATACGACTTACTCGCGGACGCGGAGCCGGCCACGGCCTGCTCGTCTGCCTACGGTTTGTGTGAGTGATC CAACTGAGAAGGAGAGGTAA
Downstream 100 bases:
>100_bases CCGCCATGAACGCTGTCGAAAACTATTTCGGCGACGGGGCGATCGATGTGCCGCACAGCATCGAGGCCGAGCAATCGGTC CTCGGTGCGCTGATGATCGA
Product: chromosome partitioning protein gp35
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MAKNSIDAYGAKGKGNLLDFDPDDLTLVVDEAHPLYDSRVHLPLDEAMVRNIDFQGVLQPIEVTKNPETGEIEVVTGRQR VKNCREANRRRRDRGDPPRLIQGFVRRLGREERDKVLSAATASENAIRQQETPISRAEKMARQLAYRSEDDVATIFGCTV QTVRASLSLLECCADVQKAIEAEQINLTHAKALAKLSPAEQREKVRALIAAGSGVKGRAKAAAQRAVIDGGAPRMRSRAT IEAKLAGEPADSECAATLRWVLGQD
Sequences:
>Translated_265_residues MAKNSIDAYGAKGKGNLLDFDPDDLTLVVDEAHPLYDSRVHLPLDEAMVRNIDFQGVLQPIEVTKNPETGEIEVVTGRQR VKNCREANRRRRDRGDPPRLIQGFVRRLGREERDKVLSAATASENAIRQQETPISRAEKMARQLAYRSEDDVATIFGCTV QTVRASLSLLECCADVQKAIEAEQINLTHAKALAKLSPAEQREKVRALIAAGSGVKGRAKAAAQRAVIDGGAPRMRSRAT IEAKLAGEPADSECAATLRWVLGQD >Mature_264_residues AKNSIDAYGAKGKGNLLDFDPDDLTLVVDEAHPLYDSRVHLPLDEAMVRNIDFQGVLQPIEVTKNPETGEIEVVTGRQRV KNCREANRRRRDRGDPPRLIQGFVRRLGREERDKVLSAATASENAIRQQETPISRAEKMARQLAYRSEDDVATIFGCTVQ TVRASLSLLECCADVQKAIEAEQINLTHAKALAKLSPAEQREKVRALIAAGSGVKGRAKAAAQRAVIDGGAPRMRSRATI EAKLAGEPADSECAATLRWVLGQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29034; Mature: 28903
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNSIDAYGAKGKGNLLDFDPDDLTLVVDEAHPLYDSRVHLPLDEAMVRNIDFQGVLQP CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCHHHHHHHCCCHHHCCCH IEVTKNPETGEIEVVTGRQRVKNCREANRRRRDRGDPPRLIQGFVRRLGREERDKVLSAA HHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHH TASENAIRQQETPISRAEKMARQLAYRSEDDVATIFGCTVQTVRASLSLLECCADVQKAI HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAEQINLTHAKALAKLSPAEQREKVRALIAAGSGVKGRAKAAAQRAVIDGGAPRMRSRAT HHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCE IEAKLAGEPADSECAATLRWVLGQD EEEEECCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure AKNSIDAYGAKGKGNLLDFDPDDLTLVVDEAHPLYDSRVHLPLDEAMVRNIDFQGVLQP CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCHHHHHHHCCCHHHCCCH IEVTKNPETGEIEVVTGRQRVKNCREANRRRRDRGDPPRLIQGFVRRLGREERDKVLSAA HHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHH TASENAIRQQETPISRAEKMARQLAYRSEDDVATIFGCTVQTVRASLSLLECCADVQKAI HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAEQINLTHAKALAKLSPAEQREKVRALIAAGSGVKGRAKAAAQRAVIDGGAPRMRSRAT HHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCE IEAKLAGEPADSECAATLRWVLGQD EEEEECCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA