| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238027632
Identifier: 238027632
GI number: 238027632
Start: 2245380
End: 2245799
Strand: Reverse
Name: 238027632
Synonym: bglu_1g20530
Alternate gene names: NA
Gene position: 2245799-2245380 (Counterclockwise)
Preceding gene: 238027633
Following gene: 238027631
Centisome position: 57.49
GC content: 67.62
Gene sequence:
>420_bases ATGAGCGAGCGAGTGTTTCGGGCGTTCTCCCTGCGGACGCCGATGGTCTGGGAAGCGATCGTGGAGGTGGTTCGCGCGCA CGCCAAGGCGTACATCGATCGCGGCACGCCGCTGGTGGTGATCATCACCAGCCCCGAGCACGACGCGCTGGACAGCCAGC GCGCGTACTGGCACAGCGTGGTGCTCCCGCAGATCGCCGAGCACATAGCCGACGAGGACGGCTGCCTGCGCGATGTCACC TACTGGCACGAGTACCTGGTGCTCGAGTTCCTCGGCATGACCGAGACCGCGAGCGAGAGCGGCAAGATCCGCCGCCAGCG CCGGTCGACCGCCCGCGGGAAGATCACGATCGGCGAGTACTCGGACCTCATCACGCGCGCGCAAGCGTGGGCCGCCCAGC GAGGTGTCGAGTGGGATTGA
Upstream 100 bases:
>100_bases GCGTGATGACGAAATCCGAACGGCGGCTATTCGAGATCGAGATGGTGGCACTGACCTACATCGCGCTGATGGAGCGCGGC CTCCTGGAGGTGGGCAAGCA
Downstream 100 bases:
>100_bases AGACACGTCGGAAGGACGAGGGCGAGCGCTGGACGTTCCGGGACCCGGCCGAAGTCTGCGCGCGCCGGCAGGAGGCGGAC CGTCGGGCCGCGACGCGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSERVFRAFSLRTPMVWEAIVEVVRAHAKAYIDRGTPLVVIITSPEHDALDSQRAYWHSVVLPQIAEHIADEDGCLRDVT YWHEYLVLEFLGMTETASESGKIRRQRRSTARGKITIGEYSDLITRAQAWAAQRGVEWD
Sequences:
>Translated_139_residues MSERVFRAFSLRTPMVWEAIVEVVRAHAKAYIDRGTPLVVIITSPEHDALDSQRAYWHSVVLPQIAEHIADEDGCLRDVT YWHEYLVLEFLGMTETASESGKIRRQRRSTARGKITIGEYSDLITRAQAWAAQRGVEWD >Mature_138_residues SERVFRAFSLRTPMVWEAIVEVVRAHAKAYIDRGTPLVVIITSPEHDALDSQRAYWHSVVLPQIAEHIADEDGCLRDVTY WHEYLVLEFLGMTETASESGKIRRQRRSTARGKITIGEYSDLITRAQAWAAQRGVEWD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15958; Mature: 15827
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERVFRAFSLRTPMVWEAIVEVVRAHAKAYIDRGTPLVVIITSPEHDALDSQRAYWHSV CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHH VLPQIAEHIADEDGCLRDVTYWHEYLVLEFLGMTETASESGKIRRQRRSTARGKITIGEY HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEECHH SDLITRAQAWAAQRGVEWD HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SERVFRAFSLRTPMVWEAIVEVVRAHAKAYIDRGTPLVVIITSPEHDALDSQRAYWHSV CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHH VLPQIAEHIADEDGCLRDVTYWHEYLVLEFLGMTETASESGKIRRQRRSTARGKITIGEY HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEECHH SDLITRAQAWAAQRGVEWD HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA