| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027625
Identifier: 238027625
GI number: 238027625
Start: 2236204
End: 2237667
Strand: Reverse
Name: 238027625
Synonym: bglu_1g20460
Alternate gene names: NA
Gene position: 2237667-2236204 (Counterclockwise)
Preceding gene: 238027626
Following gene: 238027624
Centisome position: 57.28
GC content: 67.21
Gene sequence:
>1464_bases ATGATGTCGCTGTCGAAAGAAGAACGGGACAAGCTCCCCGCCGACCAGTTCGCGGTGCCGGGCAAGCGCAAGTTGCCGAT CCATGATGCGCCGCATACGCGGCTCGCATGGGACATGGTCGACCGCACGCAAGGCCTGAGCGATACCGAGCGCCGTGAGG CGCGAGACAACATCCGGCGGCGCGCGAAGGAACTCGGCATCGACACCACCGGCTGGCACGCGGTCCGCGCTGCTGCGCTG GCCGCTGCTACAGCGATGACGCTCTGGGGCATGTCGCTGAATGTTCCCGAGGTCACCGACCACCCGAACCGCATGCCGTT CTCCGGCGTGCTCACGTTCGTCAACCAGCCGTCCGATCTGCCTCCGGGTGGATCTGGCGGCAAGCGCACCTACCTGCCGA AGGATGTTGCCGAGAAGGCTCTCGGGAGCCTGCTCGGCATGGCTGTCGATTTCTCCGACGACCTAAGCGCCCACGACGTC ACCCAGAAGATCGGGGTCATCACGAGCGCTGAGATCGTCGGCGACGAGGTGCGGATCGAAGGCTTTTTCTACGCCGCGGA CTTTCCGCAGGAATGCGCCCGCATTCAGGAAGAGAAAGAGGACCTGGGCTTCAGCTACGAAGTCCGGGCTCAAACTCGCC CGATGGGTGACCTGCTTCAGATCGTGAGCTGCGTGTTCACCGGGGCCGCCGTCCTCTACAAGGACAAGGCCGCCTATCAG TCAACGTCTCTGGCCGCTCAGGCCGAACAGGATATCGAGATGAACAAGGAAGAAATGGAAGCGCTGCTCGCCGGCGCGCT GGGTCCGATCACGAAGCAGATCACCGACGTGACCGCGCAGGTCGCCGCGCTGAAGGCTTCGACGGAAACCGCCGTGCACG CGAACGCCGCGATGCGCGAGCGCGTCGCGCCGCACGCGACGGCGCTGCGCAACTGCGCGGCCGCGATGGAAGCGGCCGGC ATCGGCCTGCACAGCGCGCGCGGGCACGTGAAGGTGCTGCACCACATGGCGGCGAGCATGGAAGCCGAGGCGGCCGGCGG CCACCTGCCGCACATCTACCGCGACCACGACTGGGGCTTCTCCGCCTCGAGCGATCCGGCCGAACTCGCGGCCGCTGCGG CGGCTGCAGCCGCGCGCGCGAAGCCGGCCGACGCGTCGGGCCTCACCGCCGAGAACCCGGTGATCAAGGGCATCACCGAC ACGCTCGCCGCGCTGGGCACGCAACTGACCGATCTCAAGGCCGCGGCGTTCAAGGGCGCCGAGGCACCGCAGCGCCGCAC GATCTCGTCGGAGACGATCGCGCTGCTGGCCAAGGGCGGTCTCACGCTCACGGACGAGCAGAAGAAGGAGGGCATCACCG AAGAGCAGATCGACGCGACGCTGAAGGCGGCCGGGGTGACGAGCATCACCGCCCGCATCGCCGCGAAGCAGAAGATCGCC GCCGACGGCTTGCTGCGCAAGTAA
Upstream 100 bases:
>100_bases TGGCCGGCGCGAAGTTTGCAGCCGGCCAGGCTGCTCGCACGCCCGCAGCTCAGGATGCGCTCGAGCTGCTGGAACGCGTC AAGTCGCTGTAACGGAGCCG
Downstream 100 bases:
>100_bases GCGCGGCTCGTTCGCCCTCAATCCAGCCCCTACAGCTACAGGAAAAGTCATGAGCAAACTCATCGCACGTTCGGCGGACA CGTCCACCGACGACGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MMSLSKEERDKLPADQFAVPGKRKLPIHDAPHTRLAWDMVDRTQGLSDTERREARDNIRRRAKELGIDTTGWHAVRAAAL AAATAMTLWGMSLNVPEVTDHPNRMPFSGVLTFVNQPSDLPPGGSGGKRTYLPKDVAEKALGSLLGMAVDFSDDLSAHDV TQKIGVITSAEIVGDEVRIEGFFYAADFPQECARIQEEKEDLGFSYEVRAQTRPMGDLLQIVSCVFTGAAVLYKDKAAYQ STSLAAQAEQDIEMNKEEMEALLAGALGPITKQITDVTAQVAALKASTETAVHANAAMRERVAPHATALRNCAAAMEAAG IGLHSARGHVKVLHHMAASMEAEAAGGHLPHIYRDHDWGFSASSDPAELAAAAAAAAARAKPADASGLTAENPVIKGITD TLAALGTQLTDLKAAAFKGAEAPQRRTISSETIALLAKGGLTLTDEQKKEGITEEQIDATLKAAGVTSITARIAAKQKIA ADGLLRK
Sequences:
>Translated_487_residues MMSLSKEERDKLPADQFAVPGKRKLPIHDAPHTRLAWDMVDRTQGLSDTERREARDNIRRRAKELGIDTTGWHAVRAAAL AAATAMTLWGMSLNVPEVTDHPNRMPFSGVLTFVNQPSDLPPGGSGGKRTYLPKDVAEKALGSLLGMAVDFSDDLSAHDV TQKIGVITSAEIVGDEVRIEGFFYAADFPQECARIQEEKEDLGFSYEVRAQTRPMGDLLQIVSCVFTGAAVLYKDKAAYQ STSLAAQAEQDIEMNKEEMEALLAGALGPITKQITDVTAQVAALKASTETAVHANAAMRERVAPHATALRNCAAAMEAAG IGLHSARGHVKVLHHMAASMEAEAAGGHLPHIYRDHDWGFSASSDPAELAAAAAAAAARAKPADASGLTAENPVIKGITD TLAALGTQLTDLKAAAFKGAEAPQRRTISSETIALLAKGGLTLTDEQKKEGITEEQIDATLKAAGVTSITARIAAKQKIA ADGLLRK >Mature_487_residues MMSLSKEERDKLPADQFAVPGKRKLPIHDAPHTRLAWDMVDRTQGLSDTERREARDNIRRRAKELGIDTTGWHAVRAAAL AAATAMTLWGMSLNVPEVTDHPNRMPFSGVLTFVNQPSDLPPGGSGGKRTYLPKDVAEKALGSLLGMAVDFSDDLSAHDV TQKIGVITSAEIVGDEVRIEGFFYAADFPQECARIQEEKEDLGFSYEVRAQTRPMGDLLQIVSCVFTGAAVLYKDKAAYQ STSLAAQAEQDIEMNKEEMEALLAGALGPITKQITDVTAQVAALKASTETAVHANAAMRERVAPHATALRNCAAAMEAAG IGLHSARGHVKVLHHMAASMEAEAAGGHLPHIYRDHDWGFSASSDPAELAAAAAAAAARAKPADASGLTAENPVIKGITD TLAALGTQLTDLKAAAFKGAEAPQRRTISSETIALLAKGGLTLTDEQKKEGITEEQIDATLKAAGVTSITARIAAKQKIA ADGLLRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51724; Mature: 51724
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSLSKEERDKLPADQFAVPGKRKLPIHDAPHTRLAWDMVDRTQGLSDTERREARDNIRR CCCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH RAKELGIDTTGWHAVRAAALAAATAMTLWGMSLNVPEVTDHPNRMPFSGVLTFVNQPSDL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC PPGGSGGKRTYLPKDVAEKALGSLLGMAVDFSDDLSAHDVTQKIGVITSAEIVGDEVRIE CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEHHHCCCEEEEE GFFYAADFPQECARIQEEKEDLGFSYEVRAQTRPMGDLLQIVSCVFTGAAVLYKDKAAYQ EEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCHHHEEECHHHHH STSLAAQAEQDIEMNKEEMEALLAGALGPITKQITDVTAQVAALKASTETAVHANAAMRE HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RVAPHATALRNCAAAMEAAGIGLHSARGHVKVLHHMAASMEAEAAGGHLPHIYRDHDWGF HCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCC SASSDPAELAAAAAAAAARAKPADASGLTAENPVIKGITDTLAALGTQLTDLKAAAFKGA CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCC EAPQRRTISSETIALLAKGGLTLTDEQKKEGITEEQIDATLKAAGVTSITARIAAKQKIA CCCHHHCCCHHHHHHEECCCCEECCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH ADGLLRK HCCCCCC >Mature Secondary Structure MMSLSKEERDKLPADQFAVPGKRKLPIHDAPHTRLAWDMVDRTQGLSDTERREARDNIRR CCCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH RAKELGIDTTGWHAVRAAALAAATAMTLWGMSLNVPEVTDHPNRMPFSGVLTFVNQPSDL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC PPGGSGGKRTYLPKDVAEKALGSLLGMAVDFSDDLSAHDVTQKIGVITSAEIVGDEVRIE CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEHHHCCCEEEEE GFFYAADFPQECARIQEEKEDLGFSYEVRAQTRPMGDLLQIVSCVFTGAAVLYKDKAAYQ EEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCHHHEEECHHHHH STSLAAQAEQDIEMNKEEMEALLAGALGPITKQITDVTAQVAALKASTETAVHANAAMRE HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RVAPHATALRNCAAAMEAAGIGLHSARGHVKVLHHMAASMEAEAAGGHLPHIYRDHDWGF HCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCC SASSDPAELAAAAAAAAARAKPADASGLTAENPVIKGITDTLAALGTQLTDLKAAAFKGA CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCC EAPQRRTISSETIALLAKGGLTLTDEQKKEGITEEQIDATLKAAGVTSITARIAAKQKIA CCCHHHCCCHHHHHHEECCCCEECCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH ADGLLRK HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA