| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027624
Identifier: 238027624
GI number: 238027624
Start: 2235096
End: 2236154
Strand: Reverse
Name: 238027624
Synonym: bglu_1g20450
Alternate gene names: NA
Gene position: 2236154-2235096 (Counterclockwise)
Preceding gene: 238027625
Following gene: 238027623
Centisome position: 57.24
GC content: 66.19
Gene sequence:
>1059_bases ATGAGCAAACTCATCGCACGTTCGGCGGACACGTCCACCGACGACGCGCTGCTCGCACTGGGCAACGTGCTCGGCGCCAG CGGCAACACCGTGCAAGCACTGTCGGCCGCGGCCGACTACAGCGGCCCCGGCGCTCTCGAAGTGCCGGTGTTCGAACGCG AGATCGTCGACCTGATCCGTCGCGAATCGCCGATGCTGGCCATCACGGAGCACAACCCGGCGACGGGCCACCCGCACCGC TACTTCGAGCAGATCGCGATCGCCACCGCGAGCTCGAACGATCCGCGCAACCTCGCGGCCACCCCGACGGGCCCGACGCG CGTCGAGCGTGCGGCGTTCATCAAGGCGACCGTCGCCCAGTCGAACCTCTCGCTGTTCGACCGCGACGTGACCGAGCAGC AGGGCCAGTTCGCGACGCTGCAGGCGAAGGACGTCGAGGACATCCTCACGGCGATCATCGTCTGGCGCGCCAACATGTAC TGGGCCGGCACGGACACGTCGCTGCTGATGCCGACCACGCTGCAATGGGTCGGCGGCCTGGAGCAGATCACGCAGCAGGC CACGATCCCGTACGGCTCCTCGATCATCGACGGCCTGAAGACGATGGTCGCCACGATGATGGCGAACAAGATCTTCAAGC CGAAGCCGACGGCGATCGGGCTGAACCCGCTGCTGATCGACAAGATCGAGAAGGAAGCGAAAGCGTCCCACATCGAGCTG CGCACGAAGGAGATCGTCGCGGGCGTGACCGTGAAGTACCTGGCCACGCAGGCGGGCGAGCTGCCGCTGATCCCGGATCC GTACATGCCGACCGACACGACCGGCAAGTATGGCTTCGCGAATCCGCCGAATGGCCTGAGCAACTACTACGCGGCGATCC TGACGATGCCGATGGTCGAGGTGGTGTACATCGGCAAGGGCACCAACGGCCAGCCGCGCATCTTCCAGCTCGGCCTGACC GGCAACCTGGCCGGCCAGTTCGTCGGCGTGCAGTTCGACGCGCTGCTGTTCAAGGGCTACAGCTACGCCCACGCGGTGGT GGCGGTCGTCAGCAACTGA
Upstream 100 bases:
>100_bases CGCATCGCCGCGAAGCAGAAGATCGCCGCCGACGGCTTGCTGCGCAAGTAAGCGCGGCTCGTTCGCCCTCAATCCAGCCC CTACAGCTACAGGAAAAGTC
Downstream 100 bases:
>100_bases CCGGCCCAGCAGTAGCAGCGGTCGAATCGGGCGCCTGTGCGAGCAGGCGCCCGTTTTCTTTTCTCTCCCCTGAAGGGCGA CATGAACCTCTACCTCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MSKLIARSADTSTDDALLALGNVLGASGNTVQALSAAADYSGPGALEVPVFEREIVDLIRRESPMLAITEHNPATGHPHR YFEQIAIATASSNDPRNLAATPTGPTRVERAAFIKATVAQSNLSLFDRDVTEQQGQFATLQAKDVEDILTAIIVWRANMY WAGTDTSLLMPTTLQWVGGLEQITQQATIPYGSSIIDGLKTMVATMMANKIFKPKPTAIGLNPLLIDKIEKEAKASHIEL RTKEIVAGVTVKYLATQAGELPLIPDPYMPTDTTGKYGFANPPNGLSNYYAAILTMPMVEVVYIGKGTNGQPRIFQLGLT GNLAGQFVGVQFDALLFKGYSYAHAVVAVVSN
Sequences:
>Translated_352_residues MSKLIARSADTSTDDALLALGNVLGASGNTVQALSAAADYSGPGALEVPVFEREIVDLIRRESPMLAITEHNPATGHPHR YFEQIAIATASSNDPRNLAATPTGPTRVERAAFIKATVAQSNLSLFDRDVTEQQGQFATLQAKDVEDILTAIIVWRANMY WAGTDTSLLMPTTLQWVGGLEQITQQATIPYGSSIIDGLKTMVATMMANKIFKPKPTAIGLNPLLIDKIEKEAKASHIEL RTKEIVAGVTVKYLATQAGELPLIPDPYMPTDTTGKYGFANPPNGLSNYYAAILTMPMVEVVYIGKGTNGQPRIFQLGLT GNLAGQFVGVQFDALLFKGYSYAHAVVAVVSN >Mature_351_residues SKLIARSADTSTDDALLALGNVLGASGNTVQALSAAADYSGPGALEVPVFEREIVDLIRRESPMLAITEHNPATGHPHRY FEQIAIATASSNDPRNLAATPTGPTRVERAAFIKATVAQSNLSLFDRDVTEQQGQFATLQAKDVEDILTAIIVWRANMYW AGTDTSLLMPTTLQWVGGLEQITQQATIPYGSSIIDGLKTMVATMMANKIFKPKPTAIGLNPLLIDKIEKEAKASHIELR TKEIVAGVTVKYLATQAGELPLIPDPYMPTDTTGKYGFANPPNGLSNYYAAILTMPMVEVVYIGKGTNGQPRIFQLGLTG NLAGQFVGVQFDALLFKGYSYAHAVVAVVSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37785; Mature: 37654
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLIARSADTSTDDALLALGNVLGASGNTVQALSAAADYSGPGALEVPVFEREIVDLIR CCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEECCHHHHHHHHHHH RESPMLAITEHNPATGHPHRYFEQIAIATASSNDPRNLAATPTGPTRVERAAFIKATVAQ CCCCEEEEECCCCCCCCHHHHHHHHHEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHH SNLSLFDRDVTEQQGQFATLQAKDVEDILTAIIVWRANMYWAGTDTSLLMPTTLQWVGGL CCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCEEEECCCCCEECCHHHHHHCCH EQITQQATIPYGSSIIDGLKTMVATMMANKIFKPKPTAIGLNPLLIDKIEKEAKASHIEL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHEE RTKEIVAGVTVKYLATQAGELPLIPDPYMPTDTTGKYGFANPPNGLSNYYAAILTMPMVE HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEE VVYIGKGTNGQPRIFQLGLTGNLAGQFVGVQFDALLFKGYSYAHAVVAVVSN EEEEECCCCCCCEEEEEECCCCCCCEEECEEEEHHHHCCCHHHEEEEEEECC >Mature Secondary Structure SKLIARSADTSTDDALLALGNVLGASGNTVQALSAAADYSGPGALEVPVFEREIVDLIR CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEECCHHHHHHHHHHH RESPMLAITEHNPATGHPHRYFEQIAIATASSNDPRNLAATPTGPTRVERAAFIKATVAQ CCCCEEEEECCCCCCCCHHHHHHHHHEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHH SNLSLFDRDVTEQQGQFATLQAKDVEDILTAIIVWRANMYWAGTDTSLLMPTTLQWVGGL CCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCEEEECCCCCEECCHHHHHHCCH EQITQQATIPYGSSIIDGLKTMVATMMANKIFKPKPTAIGLNPLLIDKIEKEAKASHIEL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHEE RTKEIVAGVTVKYLATQAGELPLIPDPYMPTDTTGKYGFANPPNGLSNYYAAILTMPMVE HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEE VVYIGKGTNGQPRIFQLGLTGNLAGQFVGVQFDALLFKGYSYAHAVVAVVSN EEEEECCCCCCCEEEEEECCCCCCCEEECEEEEHHHHCCCHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA