| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027615
Identifier: 238027615
GI number: 238027615
Start: 2226141
End: 2228048
Strand: Reverse
Name: 238027615
Synonym: bglu_1g20360
Alternate gene names: NA
Gene position: 2228048-2226141 (Counterclockwise)
Preceding gene: 238027616
Following gene: 238027614
Centisome position: 57.03
GC content: 62.84
Gene sequence:
>1908_bases ATGATCAACGTCTACGACATCGGCACGACCCTGAAGCTGGTTGACCGGGTGTCGCCCGAGCTGCTCAAGCTCTCGCGCGA GTTCTCGAAGGTCGACGCGATGGCGCTCCAGCTCGGGAAGCGCTTGCAGAAGATCGGCGCGGAAGCCGGCGGGGTCCGCA ACGTGGCAGCCGCGTCGAAGGCGCTCGATTCCAGCCTGAAGGCGGTCGGCAACCAGGCAGCGCTGGCCGAGCGGAACCTG CGCGGCATCAAGGGCGCCATCCCGACCGGGAAGATCGGCATCGAGGCGGAGTTGACCGCAGCGAACGTGCAGGCGAAGAC GCTGGCCACCACGCTCGCCGGCATGCGCGGTGGCCGCTGGTTGCCGGGCCCGGGCGGCGGAGGCGGTGGAGGTGGCGGCG CGGGACGTGGGGGCCACGGCGGCCGGATTCACGGCGGCAACCTGCATTTCGGCTCGCACGGTATTGGCATCGGCGGCGTG GGCATGGGCCTGATGAGCGACGCCCTGGTGCCGCTGGGCGCGGCCATGGTCGCCGGCTATGTGGGCAAGCAATTCTACGA GTCCGCCAAGAATCTCCAGACCGAGCACGCCCGATTCAAGCTGTTCGGCATGGACGACGCCCAGAACAAGAGCGCGTTCG ATTTCGCCCACAACCTGCACGCCTATGCAACGTCCGAGAACGAGGCGATGCATTACATGAACGAGGCGCAGGCGGTCTTC CGCGAGTCGGGCGAAACCGGCGAGAAGGCCCTGGCCGGCGCCAAGATGGCGGCGCCGTTCCTCGCGAAGATGATGGCGGC CAGCTCGATCCTGTCCGAGGAGTCGCAGGCGAAGTTGAAGCACGAGTCGCTCGCGATGTTGCGGGCGGTCGAGCTACAGG GCGGCGCGCGCGACTCGCAGCGCTTCGCGGAGCTGGCCGACTTCGGGTTCCGGATGACCCAGACCTCGGGCGGCCAGGTG AACTGGGAGCAACTTCGGCAGATGTACCGCACTGGCGGCGTGGCAGTACAGCGCATGGGCATGGACGCGATCGCCGAGCT GGAGCCGATTATCGGCGAGTTCAAGGGTGGCTCATTCGCAACGGCGATGCGGACTGCGTACAACCGCATGAACGGCATTA TCAAGCTTCCCAATCAGGCAGTGCATGAACTGATTAAAGCCGGGATCTGGGACAAGTCGAAAGTCGAGTTGAACGGGAAC GGAGGAATAAAACGATTCCTTGGAAATCCTCTTCAGCACTCGGACGAGTATGCCAACAACGCGGCTGAATATTATTTCAA ATACGTTCGGCCTTACTACGACAAGCAGGGCTACAAAGATACCGATCGCGATCGTATGAACGCTATGTTCTTCGGGAGCA CTGGCGGGAATCTGTTTTCGAAGATCGATCAGCAGGAACCCGTGATTCGATCTGCCCTGGAGGCGTTCCAGAAGACCAAA GGACTAGATCCGGCGCTAGATCTAGCGAAAGGCACGGCGACTGGCGCTGAGAAAGACTTCGAAGCCGCGTGGACGGACTT CAAGACGCAGTTTGGAAACTCCATGCTGCCCCAGGTGACCGAAATTCTCAGGACCGGTACGGAGGTGCTCCGCGCCATTG CCGCATTTGCAAATAGCGACGCGGGTAAGGCAATTCAGTCCATGGGTTCGATGATCACGGGGGCTGCTGCGTGGCCGTGG CACCTCATTGGCAGCATGTTCGGCGGAGACAAGCAAGCGACTCCGGACCCGACTGTCCCGAAGAAGGACGCCTCCACTGG CAACGTCCACACGACGATCAACCTGGACGGTCGCAAGATCGCTCAGGCCGTGACGCCGTACATGGCCGGCGCGCTCGGGT CCGGAATGTATGGCTTGGGCGTCGATCCGACGGTGGCGGTCCCGATGCCTGGTATCAAGGGCGGTTGA
Upstream 100 bases:
>100_bases CTTGGGGTATTGGACCCACGAAATGTGATCGGCCAGCCATTCGTGGATGCGGTACGAAATTCGCATGTTCCCTCCCAGAA GCCATTGATTTTATAGCGAA
Downstream 100 bases:
>100_bases TATGGCTACGACTCTCATCCTCGGCGACTTTGAGTTTCAAGATTTCGAGGTCCCGGAAGTTATCGGGTTCGGTGGAGACC AACGCCTCTCGATCAAGAAA
Product: putative phage-related tail protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 635; Mature: 635
Protein sequence:
>635_residues MINVYDIGTTLKLVDRVSPELLKLSREFSKVDAMALQLGKRLQKIGAEAGGVRNVAAASKALDSSLKAVGNQAALAERNL RGIKGAIPTGKIGIEAELTAANVQAKTLATTLAGMRGGRWLPGPGGGGGGGGGAGRGGHGGRIHGGNLHFGSHGIGIGGV GMGLMSDALVPLGAAMVAGYVGKQFYESAKNLQTEHARFKLFGMDDAQNKSAFDFAHNLHAYATSENEAMHYMNEAQAVF RESGETGEKALAGAKMAAPFLAKMMAASSILSEESQAKLKHESLAMLRAVELQGGARDSQRFAELADFGFRMTQTSGGQV NWEQLRQMYRTGGVAVQRMGMDAIAELEPIIGEFKGGSFATAMRTAYNRMNGIIKLPNQAVHELIKAGIWDKSKVELNGN GGIKRFLGNPLQHSDEYANNAAEYYFKYVRPYYDKQGYKDTDRDRMNAMFFGSTGGNLFSKIDQQEPVIRSALEAFQKTK GLDPALDLAKGTATGAEKDFEAAWTDFKTQFGNSMLPQVTEILRTGTEVLRAIAAFANSDAGKAIQSMGSMITGAAAWPW HLIGSMFGGDKQATPDPTVPKKDASTGNVHTTINLDGRKIAQAVTPYMAGALGSGMYGLGVDPTVAVPMPGIKGG
Sequences:
>Translated_635_residues MINVYDIGTTLKLVDRVSPELLKLSREFSKVDAMALQLGKRLQKIGAEAGGVRNVAAASKALDSSLKAVGNQAALAERNL RGIKGAIPTGKIGIEAELTAANVQAKTLATTLAGMRGGRWLPGPGGGGGGGGGAGRGGHGGRIHGGNLHFGSHGIGIGGV GMGLMSDALVPLGAAMVAGYVGKQFYESAKNLQTEHARFKLFGMDDAQNKSAFDFAHNLHAYATSENEAMHYMNEAQAVF RESGETGEKALAGAKMAAPFLAKMMAASSILSEESQAKLKHESLAMLRAVELQGGARDSQRFAELADFGFRMTQTSGGQV NWEQLRQMYRTGGVAVQRMGMDAIAELEPIIGEFKGGSFATAMRTAYNRMNGIIKLPNQAVHELIKAGIWDKSKVELNGN GGIKRFLGNPLQHSDEYANNAAEYYFKYVRPYYDKQGYKDTDRDRMNAMFFGSTGGNLFSKIDQQEPVIRSALEAFQKTK GLDPALDLAKGTATGAEKDFEAAWTDFKTQFGNSMLPQVTEILRTGTEVLRAIAAFANSDAGKAIQSMGSMITGAAAWPW HLIGSMFGGDKQATPDPTVPKKDASTGNVHTTINLDGRKIAQAVTPYMAGALGSGMYGLGVDPTVAVPMPGIKGG >Mature_635_residues MINVYDIGTTLKLVDRVSPELLKLSREFSKVDAMALQLGKRLQKIGAEAGGVRNVAAASKALDSSLKAVGNQAALAERNL RGIKGAIPTGKIGIEAELTAANVQAKTLATTLAGMRGGRWLPGPGGGGGGGGGAGRGGHGGRIHGGNLHFGSHGIGIGGV GMGLMSDALVPLGAAMVAGYVGKQFYESAKNLQTEHARFKLFGMDDAQNKSAFDFAHNLHAYATSENEAMHYMNEAQAVF RESGETGEKALAGAKMAAPFLAKMMAASSILSEESQAKLKHESLAMLRAVELQGGARDSQRFAELADFGFRMTQTSGGQV NWEQLRQMYRTGGVAVQRMGMDAIAELEPIIGEFKGGSFATAMRTAYNRMNGIIKLPNQAVHELIKAGIWDKSKVELNGN GGIKRFLGNPLQHSDEYANNAAEYYFKYVRPYYDKQGYKDTDRDRMNAMFFGSTGGNLFSKIDQQEPVIRSALEAFQKTK GLDPALDLAKGTATGAEKDFEAAWTDFKTQFGNSMLPQVTEILRTGTEVLRAIAAFANSDAGKAIQSMGSMITGAAAWPW HLIGSMFGGDKQATPDPTVPKKDASTGNVHTTINLDGRKIAQAVTPYMAGALGSGMYGLGVDPTVAVPMPGIKGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67303; Mature: 67303
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINVYDIGTTLKLVDRVSPELLKLSREFSKVDAMALQLGKRLQKIGAEAGGVRNVAAASK CEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH ALDSSLKAVGNQAALAERNLRGIKGAIPTGKIGIEAELTAANVQAKTLATTLAGMRGGRW HHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCC LPGPGGGGGGGGGAGRGGHGGRIHGGNLHFGSHGIGIGGVGMGLMSDALVPLGAAMVAGY CCCCCCCCCCCCCCCCCCCCCEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VGKQFYESAKNLQTEHARFKLFGMDDAQNKSAFDFAHNLHAYATSENEAMHYMNEAQAVF HHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHH RESGETGEKALAGAKMAAPFLAKMMAASSILSEESQAKLKHESLAMLRAVELQGGARDSQ HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH RFAELADFGFRMTQTSGGQVNWEQLRQMYRTGGVAVQRMGMDAIAELEPIIGEFKGGSFA HHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHCCCCCHH TAMRTAYNRMNGIIKLPNQAVHELIKAGIWDKSKVELNGNGGIKRFLGNPLQHSDEYANN HHHHHHHHHHCCEEECCHHHHHHHHHHCCCCCCEEEECCCCCHHHHCCCCHHCCHHHHHH AAEYYFKYVRPYYDKQGYKDTDRDRMNAMFFGSTGGNLFSKIDQQEPVIRSALEAFQKTK HHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHC GLDPALDLAKGTATGAEKDFEAAWTDFKTQFGNSMLPQVTEILRTGTEVLRAIAAFANSD CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC AGKAIQSMGSMITGAAAWPWHLIGSMFGGDKQATPDPTVPKKDASTGNVHTTINLDGRKI HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHH AQAVTPYMAGALGSGMYGLGVDPTVAVPMPGIKGG HHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC >Mature Secondary Structure MINVYDIGTTLKLVDRVSPELLKLSREFSKVDAMALQLGKRLQKIGAEAGGVRNVAAASK CEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH ALDSSLKAVGNQAALAERNLRGIKGAIPTGKIGIEAELTAANVQAKTLATTLAGMRGGRW HHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCC LPGPGGGGGGGGGAGRGGHGGRIHGGNLHFGSHGIGIGGVGMGLMSDALVPLGAAMVAGY CCCCCCCCCCCCCCCCCCCCCEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VGKQFYESAKNLQTEHARFKLFGMDDAQNKSAFDFAHNLHAYATSENEAMHYMNEAQAVF HHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHH RESGETGEKALAGAKMAAPFLAKMMAASSILSEESQAKLKHESLAMLRAVELQGGARDSQ HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH RFAELADFGFRMTQTSGGQVNWEQLRQMYRTGGVAVQRMGMDAIAELEPIIGEFKGGSFA HHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHCCCCCHH TAMRTAYNRMNGIIKLPNQAVHELIKAGIWDKSKVELNGNGGIKRFLGNPLQHSDEYANN HHHHHHHHHHCCEEECCHHHHHHHHHHCCCCCCEEEECCCCCHHHHCCCCHHCCHHHHHH AAEYYFKYVRPYYDKQGYKDTDRDRMNAMFFGSTGGNLFSKIDQQEPVIRSALEAFQKTK HHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHC GLDPALDLAKGTATGAEKDFEAAWTDFKTQFGNSMLPQVTEILRTGTEVLRAIAAFANSD CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC AGKAIQSMGSMITGAAAWPWHLIGSMFGGDKQATPDPTVPKKDASTGNVHTTINLDGRKI HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHH AQAVTPYMAGALGSGMYGLGVDPTVAVPMPGIKGG HHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA