| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027614
Identifier: 238027614
GI number: 238027614
Start: 2225174
End: 2226139
Strand: Reverse
Name: 238027614
Synonym: bglu_1g20350
Alternate gene names: NA
Gene position: 2226139-2225174 (Counterclockwise)
Preceding gene: 238027615
Following gene: 238027613
Centisome position: 56.99
GC content: 65.32
Gene sequence:
>966_bases ATGGCTACGACTCTCATCCTCGGCGACTTTGAGTTTCAAGATTTCGAGGTCCCGGAAGTTATCGGGTTCGGTGGAGACCA ACGCCTCTCGATCAAGAAAATGCTGGGCGGCGTGCGCGATGTGCAGGCGCTCGGGACGGACCCGCGGCCGATCGAGTGGG CCGGGCAGTTCTTCCCGACCCAGGACGGCCAGACGGCGCTCGACAGGGCTCTGACGCTCAAGCAGATGATGGACGCGGCG CAGCCGCTCTACCTGTCGTGGGACGAGATCTACCTGCAGGTGTTCATCCGCAGCTTCGACCCGGATTATCGGTTCGCGCG CATCCCGTACCGGATCTCGTGCGAGGTGGTCGCCGATCTGACGGCGCCGGTCTACGAGGCCGGTGAGCCCGATGCGGACG ACCTCATCGACGGCGATCTGGATTCCGCCAACTCGCTGACGGAAGGCATCGGCGACAGCACGCTGAGCGGCCTGATGGAC ACGGTATCGAGCGCAGTGGGCTCGGTTTCGACGTTCGTTGGTGCGGCGCAGAGCACGGTCGCGTCGGTGCTCCAGCCACT GAATGCTGCGGCCCAGCGCGTGTCGTCGCTGATCGCGTCGACCGACTCGGTTCTGGCCAGCGTGGGCGTGCCGGCCGGCG TGCTGCCGTCGGTACCGCTCCTGTCCAATATCTCGGTCTTCACGTCGCAGCTCGGGGCGTGCGGCCAGCAGACCCAACTG CTGCAGCTCAGCGGCCTGCTCGGGCGCATTAAGACGAATCTGGGCCTGGTGAACTCGAGCGTGCGCACGACGACCGTGCC GGGAGGAAACCTGTTCGATATCGCGTCGAAGGAGTACGGCGACCCTACGGCGTGGACGCTCATCGCGAATGCCAACAACC TGACCGACCCGACGCTGGCGGGCATCTCGACGCTGATCATCCCGCCTTACGTGGCCAGCGCGAGCGGCGGCGTCCTTTCT TCCTGA
Upstream 100 bases:
>100_bases GTGACGCCGTACATGGCCGGCGCGCTCGGGTCCGGAATGTATGGCTTGGGCGTCGATCCGACGGTGGCGGTCCCGATGCC TGGTATCAAGGGCGGTTGAT
Downstream 100 bases:
>100_bases TCCATGACTTCATTCCTCCAACCGACCGCACGCTCGCCGCGCGGGGCGGTGAAGTTGAACGGCGAACTGATCAAGGGGTG GATCGAGCTGGAGGTCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MATTLILGDFEFQDFEVPEVIGFGGDQRLSIKKMLGGVRDVQALGTDPRPIEWAGQFFPTQDGQTALDRALTLKQMMDAA QPLYLSWDEIYLQVFIRSFDPDYRFARIPYRISCEVVADLTAPVYEAGEPDADDLIDGDLDSANSLTEGIGDSTLSGLMD TVSSAVGSVSTFVGAAQSTVASVLQPLNAAAQRVSSLIASTDSVLASVGVPAGVLPSVPLLSNISVFTSQLGACGQQTQL LQLSGLLGRIKTNLGLVNSSVRTTTVPGGNLFDIASKEYGDPTAWTLIANANNLTDPTLAGISTLIIPPYVASASGGVLS S
Sequences:
>Translated_321_residues MATTLILGDFEFQDFEVPEVIGFGGDQRLSIKKMLGGVRDVQALGTDPRPIEWAGQFFPTQDGQTALDRALTLKQMMDAA QPLYLSWDEIYLQVFIRSFDPDYRFARIPYRISCEVVADLTAPVYEAGEPDADDLIDGDLDSANSLTEGIGDSTLSGLMD TVSSAVGSVSTFVGAAQSTVASVLQPLNAAAQRVSSLIASTDSVLASVGVPAGVLPSVPLLSNISVFTSQLGACGQQTQL LQLSGLLGRIKTNLGLVNSSVRTTTVPGGNLFDIASKEYGDPTAWTLIANANNLTDPTLAGISTLIIPPYVASASGGVLS S >Mature_320_residues ATTLILGDFEFQDFEVPEVIGFGGDQRLSIKKMLGGVRDVQALGTDPRPIEWAGQFFPTQDGQTALDRALTLKQMMDAAQ PLYLSWDEIYLQVFIRSFDPDYRFARIPYRISCEVVADLTAPVYEAGEPDADDLIDGDLDSANSLTEGIGDSTLSGLMDT VSSAVGSVSTFVGAAQSTVASVLQPLNAAAQRVSSLIASTDSVLASVGVPAGVLPSVPLLSNISVFTSQLGACGQQTQLL QLSGLLGRIKTNLGLVNSSVRTTTVPGGNLFDIASKEYGDPTAWTLIANANNLTDPTLAGISTLIIPPYVASASGGVLSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33698; Mature: 33567
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTLILGDFEFQDFEVPEVIGFGGDQRLSIKKMLGGVRDVQALGTDPRPIEWAGQFFPT CCEEEEEECCCCCCCCCCHHCCCCCCCCEEHHHHHCCHHHHHHHCCCCCCCCCCCCCCCC QDGQTALDRALTLKQMMDAAQPLYLSWDEIYLQVFIRSFDPDYRFARIPYRISCEVVADL CCCHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHCCCCCCEEECCEEEEHHHHHHC TAPVYEAGEPDADDLIDGDLDSANSLTEGIGDSTLSGLMDTVSSAVGSVSTFVGAAQSTV CHHHHCCCCCCHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASVLQPLNAAAQRVSSLIASTDSVLASVGVPAGVLPSVPLLSNISVFTSQLGACGQQTQL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH LQLSGLLGRIKTNLGLVNSSVRTTTVPGGNLFDIASKEYGDPTAWTLIANANNLTDPTLA HHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCCCCEEEEEECCCCCCCCHHH GISTLIIPPYVASASGGVLSS HHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure ATTLILGDFEFQDFEVPEVIGFGGDQRLSIKKMLGGVRDVQALGTDPRPIEWAGQFFPT CEEEEEECCCCCCCCCCHHCCCCCCCCEEHHHHHCCHHHHHHHCCCCCCCCCCCCCCCC QDGQTALDRALTLKQMMDAAQPLYLSWDEIYLQVFIRSFDPDYRFARIPYRISCEVVADL CCCHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHCCCCCCEEECCEEEEHHHHHHC TAPVYEAGEPDADDLIDGDLDSANSLTEGIGDSTLSGLMDTVSSAVGSVSTFVGAAQSTV CHHHHCCCCCCHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASVLQPLNAAAQRVSSLIASTDSVLASVGVPAGVLPSVPLLSNISVFTSQLGACGQQTQL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH LQLSGLLGRIKTNLGLVNSSVRTTTVPGGNLFDIASKEYGDPTAWTLIANANNLTDPTLA HHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCCCCEEEEEECCCCCCCCHHH GISTLIIPPYVASASGGVLSS HHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA