| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238027612
Identifier: 238027612
GI number: 238027612
Start: 2223336
End: 2224055
Strand: Reverse
Name: 238027612
Synonym: bglu_1g20330
Alternate gene names: NA
Gene position: 2224055-2223336 (Counterclockwise)
Preceding gene: 238027613
Following gene: 238027611
Centisome position: 56.93
GC content: 63.33
Gene sequence:
>720_bases ATGAGCTATCCGGCTCTGGCAAACGCGATTCGGCAACAGGCCCTTGGCACTCATGGTTTGGCCTCACTGCCTCAACTGGC GACGATCAGCAGCTATGACCCGAATCGGCACGCTGTGAAGGTGGTCATTCAGCCCGTCGATCCCACGGTAGGCGAGGCGG AGTCGAACTGGATGCCGCTCGGCGCGATCGGCATCGGCAGCGGCTGGGGCGTCGCCGTCGGGCCGAAGCTCGGCGACCAG GTGCTGGTGGTGTACGAGGGTGGCGATTTCTCGTCTGGCACGGTTGTGGCGCGCGTCTTCTCGATTGCACAGCCGGCACC CGCGGTACCGTCTGGCGAGATCTGGGCAGTGCACGAGAAAGGGCAGTTCCTGAAGCTGACCAACGACGGAAAGCTCACCG CGAACGATGCGGCAGGCTCGACGGTGGTGATGAATGGCGATGGCACTGGAACCGTGGCGTTCGCGGGCGGCCTGAAGGTC AACGCGGACACGATCATCAATGGCACGTTGACCGTGACCGAGACGATCACCGGCGAGGCCGGTATCACGATCACGGGTGA GAACCCGACCGGGGCGGCATCGACCATCACCGGCGATTTCAAGATCGTCGGCGACATCGATTCGACCGGCTCGATCACGA ACAACGGGAAGCACGTGGACAGCACGCACGTGCATTCGAATGGCAACGGCGGCGCGAATACAGGGACTCCGGTGAGCTGA
Upstream 100 bases:
>100_bases CGTATTACACCGACAACATCCGGCGCACGCTCAGTTTCGAGGGCGGCTACGACATGATCATCGGTGCGAAGAACCACTCC CCAGACTCCGAGGTGACCCT
Downstream 100 bases:
>100_bases TGGTCGATCTCTACCACTACTACGGCACGGACCTCTCCGCGTCGCCGTCCGGCGATCTCGTGGTCGCCGATGGCCCGACG ACGGGCGTGCAGCGGGTCTA
Product: phage baseplate assembly protein V
Products: NA
Alternate protein names: Phage-Related Baseplate Assembly Protein
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MSYPALANAIRQQALGTHGLASLPQLATISSYDPNRHAVKVVIQPVDPTVGEAESNWMPLGAIGIGSGWGVAVGPKLGDQ VLVVYEGGDFSSGTVVARVFSIAQPAPAVPSGEIWAVHEKGQFLKLTNDGKLTANDAAGSTVVMNGDGTGTVAFAGGLKV NADTIINGTLTVTETITGEAGITITGENPTGAASTITGDFKIVGDIDSTGSITNNGKHVDSTHVHSNGNGGANTGTPVS
Sequences:
>Translated_239_residues MSYPALANAIRQQALGTHGLASLPQLATISSYDPNRHAVKVVIQPVDPTVGEAESNWMPLGAIGIGSGWGVAVGPKLGDQ VLVVYEGGDFSSGTVVARVFSIAQPAPAVPSGEIWAVHEKGQFLKLTNDGKLTANDAAGSTVVMNGDGTGTVAFAGGLKV NADTIINGTLTVTETITGEAGITITGENPTGAASTITGDFKIVGDIDSTGSITNNGKHVDSTHVHSNGNGGANTGTPVS >Mature_238_residues SYPALANAIRQQALGTHGLASLPQLATISSYDPNRHAVKVVIQPVDPTVGEAESNWMPLGAIGIGSGWGVAVGPKLGDQV LVVYEGGDFSSGTVVARVFSIAQPAPAVPSGEIWAVHEKGQFLKLTNDGKLTANDAAGSTVVMNGDGTGTVAFAGGLKVN ADTIINGTLTVTETITGEAGITITGENPTGAASTITGDFKIVGDIDSTGSITNNGKHVDSTHVHSNGNGGANTGTPVS
Specific function: Unknown
COG id: COG4384
COG function: function code S; Mu-like prophage protein gp45
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24029; Mature: 23898
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYPALANAIRQQALGTHGLASLPQLATISSYDPNRHAVKVVIQPVDPTVGEAESNWMPL CCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCEEEE GAIGIGSGWGVAVGPKLGDQVLVVYEGGDFSSGTVVARVFSIAQPAPAVPSGEIWAVHEK EEEEECCCCCEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECC GQFLKLTNDGKLTANDAAGSTVVMNGDGTGTVAFAGGLKVNADTIINGTLTVTETITGEA CCEEEEECCCCEEECCCCCCEEEECCCCCEEEEEECCEEECCCEEEECEEEEEEEECCCC GITITGENPTGAASTITGDFKIVGDIDSTGSITNNGKHVDSTHVHSNGNGGANTGTPVS CEEEECCCCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure SYPALANAIRQQALGTHGLASLPQLATISSYDPNRHAVKVVIQPVDPTVGEAESNWMPL CCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCEEEE GAIGIGSGWGVAVGPKLGDQVLVVYEGGDFSSGTVVARVFSIAQPAPAVPSGEIWAVHEK EEEEECCCCCEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECC GQFLKLTNDGKLTANDAAGSTVVMNGDGTGTVAFAGGLKVNADTIINGTLTVTETITGEA CCEEEEECCCCEEECCCCCCEEEECCCCCEEEEEECCEEECCCEEEECEEEEEEEECCCC GITITGENPTGAASTITGDFKIVGDIDSTGSITNNGKHVDSTHVHSNGNGGANTGTPVS CEEEECCCCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA