| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027608
Identifier: 238027608
GI number: 238027608
Start: 2219350
End: 2220990
Strand: Reverse
Name: 238027608
Synonym: bglu_1g20290
Alternate gene names: NA
Gene position: 2220990-2219350 (Counterclockwise)
Preceding gene: 238027609
Following gene: 238027607
Centisome position: 56.85
GC content: 66.12
Gene sequence:
>1641_bases ATGCGTCGCATCGAAACGTATATCGGGCAGCAAGTCTACGAGTGGACATTCTCCGCTCAGGCGCAGCAAACCATGGTGGG GCTGGCGAAGCTCAGCTCGGCGGTGCTCGGCACCAACACCGTCGTGCAGGGGCTTGCGTGCACCCCGACATCGCCGGCCG GCATGACTGTCCAAATCGGGAAGGGCGAGATCTACCAACTCGAGAACCTGGAAGCGACCACGTGCGGCACGTTGCCGGCC GACACGACCGATCAGATCCTCAAACAGGGCATTCAGCTCGAAACGTACATCAGCTCGGCGTTTGCGCCGCCCGGTACGAG CGGGCAGTCGATCAGCTACCTGATCGAGGCGCAGTATCAGGACAGCGATATCAGCCTTGATCCGACCACCGGGAACGCTC CGGTGGTGCTGCAGTTCTACAACGCCGCGAACCCGGCGACCCCGTGGTCAGGGCCCGGTAATACGGGTGCGACGAGCAAC ACATTCCGCGATGGAGTGGTCGCATTTCAGGTGAAGGCCGGGATCCCTGCGACGAGCGGGACCCAGGCGACGCCGTCGCC GGACACCGGCTGGGTGGGCCTTTGGGTGATCACTGTCGCGTTCGGCCAAACCTCGATCACGTCGGCGAACATCGCCCAGT ACTCGGGCGCGCCGATTCTGCCGAGCGGCCTTCTTCAATCGGTTCAGACCGGCAACCTCAACTTCGGCACCGACGTTGGC GCGGTCAACACGCTGCAGGCGAATTTCCCCGTTCCGTCTACGACTCTCACCGACAACCAGGCCTTCTGGGTGAAGGTGGC GAACACGAATACCGGGGCGGCGACCTTCACCCCCAACCCGGGCGTAATCGCGGCTGCGCCCATCGTCGGCGTTTCCCAGA GTGCTCTCACGGGCGGCGAGCTCGCCGCGGGCGGTCGTGCGCTGCTGCTCTGGCGTGCCGACATTTCCTCGTACGTGCTG ATCACCTGTACTGGCAGTGTGCAGTTGGGAGCACCGCGCTTCCAGATTTTTACATCGAGCGGCAACTTCACCGTGCCGCC CGGGGTGACGACGATCTATCGAACTGGCTGTGCCGGTGGGGGAGGTGGCGCCGGATCGCCGAACATCCCCGCCAACAACA TCGTCGCCGGTTCTGCTGGTGGTGGTGCCGGTCGATCGTGGATCCGAAACCCAATGTCGGTGACACCTGGCCAGGTCGTT CCGATCGTGATCGGAGCTGGCGGCGTAGCCGGCGCCGTCGGGGGCACCGGTGGCAACGGGAGCAACACCTCGGTGGGATC TGACGTGCTGCCCGCGGGTGCAGGTGGCCAAGTGGGGAGCAGCGGCGCGCCGACGCAGGCATGGCCCGGCCAACCCGGCG GCAACGGATTCCCGAACGGCGAATACGGCCAAGACACGTCCCAGTACGGACCTGGCGCGACGGGTGGCCGCGGTGGCGGC GGCCCGTTCGGCGCGAGCGGAGCGCCCGGCCGCGGCGCGATTGGCGGCGTCGCCAACCTGATCGCCCCGTCCGCTTCCTA TGGCTACGGCGTCGGCGGCTCCGGCGCGGGTGGGTCGTATGGCCCGACCACTACGACGGGGACCACTAACGGCTCCGTCG GTACGCCCGGCATGCCCGGTTTCATGCTCATTGAATGGTGA
Upstream 100 bases:
>100_bases TTTCGTACTGGATCAATCAACACTCGACTGATGCGGCAAGGGCCGCATTCACCTCCACCAAGCCCGCCTCGTGCGGGCTT TTTCATTTTCAGGCCATCAC
Downstream 100 bases:
>100_bases TCACGATGGCTCGATACGCATATTTCGACGCGCAGGTGAAGGCGGTGTTGGGCTGGATCGACACCGAGGCCTACGGCTAC GCAGAGGATCCGCTCAAGGC
Product: Tail fiber protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 546; Mature: 546
Protein sequence:
>546_residues MRRIETYIGQQVYEWTFSAQAQQTMVGLAKLSSAVLGTNTVVQGLACTPTSPAGMTVQIGKGEIYQLENLEATTCGTLPA DTTDQILKQGIQLETYISSAFAPPGTSGQSISYLIEAQYQDSDISLDPTTGNAPVVLQFYNAANPATPWSGPGNTGATSN TFRDGVVAFQVKAGIPATSGTQATPSPDTGWVGLWVITVAFGQTSITSANIAQYSGAPILPSGLLQSVQTGNLNFGTDVG AVNTLQANFPVPSTTLTDNQAFWVKVANTNTGAATFTPNPGVIAAAPIVGVSQSALTGGELAAGGRALLLWRADISSYVL ITCTGSVQLGAPRFQIFTSSGNFTVPPGVTTIYRTGCAGGGGGAGSPNIPANNIVAGSAGGGAGRSWIRNPMSVTPGQVV PIVIGAGGVAGAVGGTGGNGSNTSVGSDVLPAGAGGQVGSSGAPTQAWPGQPGGNGFPNGEYGQDTSQYGPGATGGRGGG GPFGASGAPGRGAIGGVANLIAPSASYGYGVGGSGAGGSYGPTTTTGTTNGSVGTPGMPGFMLIEW
Sequences:
>Translated_546_residues MRRIETYIGQQVYEWTFSAQAQQTMVGLAKLSSAVLGTNTVVQGLACTPTSPAGMTVQIGKGEIYQLENLEATTCGTLPA DTTDQILKQGIQLETYISSAFAPPGTSGQSISYLIEAQYQDSDISLDPTTGNAPVVLQFYNAANPATPWSGPGNTGATSN TFRDGVVAFQVKAGIPATSGTQATPSPDTGWVGLWVITVAFGQTSITSANIAQYSGAPILPSGLLQSVQTGNLNFGTDVG AVNTLQANFPVPSTTLTDNQAFWVKVANTNTGAATFTPNPGVIAAAPIVGVSQSALTGGELAAGGRALLLWRADISSYVL ITCTGSVQLGAPRFQIFTSSGNFTVPPGVTTIYRTGCAGGGGGAGSPNIPANNIVAGSAGGGAGRSWIRNPMSVTPGQVV PIVIGAGGVAGAVGGTGGNGSNTSVGSDVLPAGAGGQVGSSGAPTQAWPGQPGGNGFPNGEYGQDTSQYGPGATGGRGGG GPFGASGAPGRGAIGGVANLIAPSASYGYGVGGSGAGGSYGPTTTTGTTNGSVGTPGMPGFMLIEW >Mature_546_residues MRRIETYIGQQVYEWTFSAQAQQTMVGLAKLSSAVLGTNTVVQGLACTPTSPAGMTVQIGKGEIYQLENLEATTCGTLPA DTTDQILKQGIQLETYISSAFAPPGTSGQSISYLIEAQYQDSDISLDPTTGNAPVVLQFYNAANPATPWSGPGNTGATSN TFRDGVVAFQVKAGIPATSGTQATPSPDTGWVGLWVITVAFGQTSITSANIAQYSGAPILPSGLLQSVQTGNLNFGTDVG AVNTLQANFPVPSTTLTDNQAFWVKVANTNTGAATFTPNPGVIAAAPIVGVSQSALTGGELAAGGRALLLWRADISSYVL ITCTGSVQLGAPRFQIFTSSGNFTVPPGVTTIYRTGCAGGGGGAGSPNIPANNIVAGSAGGGAGRSWIRNPMSVTPGQVV PIVIGAGGVAGAVGGTGGNGSNTSVGSDVLPAGAGGQVGSSGAPTQAWPGQPGGNGFPNGEYGQDTSQYGPGATGGRGGG GPFGASGAPGRGAIGGVANLIAPSASYGYGVGGSGAGGSYGPTTTTGTTNGSVGTPGMPGFMLIEW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53974; Mature: 53974
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRIETYIGQQVYEWTFSAQAQQTMVGLAKLSSAVLGTNTVVQGLACTPTSPAGMTVQIG CCHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHCCEEECCCCCCCEEEEEC KGEIYQLENLEATTCGTLPADTTDQILKQGIQLETYISSAFAPPGTSGQSISYLIEAQYQ CCCEEEECCCCEEECCCCCCCCHHHHHHCCCEEEEHHHHHCCCCCCCCCCEEEEEEEEEC DSDISLDPTTGNAPVVLQFYNAANPATPWSGPGNTGATSNTFRDGVVAFQVKAGIPATSG CCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC TQATPSPDTGWVGLWVITVAFGQTSITSANIAQYSGAPILPSGLLQSVQTGNLNFGTDVG CCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCCCCCC AVNTLQANFPVPSTTLTDNQAFWVKVANTNTGAATFTPNPGVIAAAPIVGVSQSALTGGE CEEEEEECCCCCCCEEECCCEEEEEEECCCCCEEEECCCCCEEEECCEECCCHHHCCCCC LAAGGRALLLWRADISSYVLITCTGSVQLGAPRFQIFTSSGNFTVPPGVTTIYRTGCAGG CCCCCCEEEEEEECCCCEEEEEEECCEEECCCEEEEEECCCCEECCCCCCEEEECCCCCC GGGAGSPNIPANNIVAGSAGGGAGRSWIRNPMSVTPGQVVPIVIGAGGVAGAVGGTGGNG CCCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCEECCCCCCCCC SNTSVGSDVLPAGAGGQVGSSGAPTQAWPGQPGGNGFPNGEYGQDTSQYGPGATGGRGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC GPFGASGAPGRGAIGGVANLIAPSASYGYGVGGSGAGGSYGPTTTTGTTNGSVGTPGMPG CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FMLIEW EEEEEC >Mature Secondary Structure MRRIETYIGQQVYEWTFSAQAQQTMVGLAKLSSAVLGTNTVVQGLACTPTSPAGMTVQIG CCHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHCCEEECCCCCCCEEEEEC KGEIYQLENLEATTCGTLPADTTDQILKQGIQLETYISSAFAPPGTSGQSISYLIEAQYQ CCCEEEECCCCEEECCCCCCCCHHHHHHCCCEEEEHHHHHCCCCCCCCCCEEEEEEEEEC DSDISLDPTTGNAPVVLQFYNAANPATPWSGPGNTGATSNTFRDGVVAFQVKAGIPATSG CCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC TQATPSPDTGWVGLWVITVAFGQTSITSANIAQYSGAPILPSGLLQSVQTGNLNFGTDVG CCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCCCCCC AVNTLQANFPVPSTTLTDNQAFWVKVANTNTGAATFTPNPGVIAAAPIVGVSQSALTGGE CEEEEEECCCCCCCEEECCCEEEEEEECCCCCEEEECCCCCEEEECCEECCCHHHCCCCC LAAGGRALLLWRADISSYVLITCTGSVQLGAPRFQIFTSSGNFTVPPGVTTIYRTGCAGG CCCCCCEEEEEEECCCCEEEEEEECCEEECCCEEEEEECCCCEECCCCCCEEEECCCCCC GGGAGSPNIPANNIVAGSAGGGAGRSWIRNPMSVTPGQVVPIVIGAGGVAGAVGGTGGNG CCCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCEECCCCCCCCC SNTSVGSDVLPAGAGGQVGSSGAPTQAWPGQPGGNGFPNGEYGQDTSQYGPGATGGRGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC GPFGASGAPGRGAIGGVANLIAPSASYGYGVGGSGAGGSYGPTTTTGTTNGSVGTPGMPG CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FMLIEW EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA