Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027608

Identifier: 238027608

GI number: 238027608

Start: 2219350

End: 2220990

Strand: Reverse

Name: 238027608

Synonym: bglu_1g20290

Alternate gene names: NA

Gene position: 2220990-2219350 (Counterclockwise)

Preceding gene: 238027609

Following gene: 238027607

Centisome position: 56.85

GC content: 66.12

Gene sequence:

>1641_bases
ATGCGTCGCATCGAAACGTATATCGGGCAGCAAGTCTACGAGTGGACATTCTCCGCTCAGGCGCAGCAAACCATGGTGGG
GCTGGCGAAGCTCAGCTCGGCGGTGCTCGGCACCAACACCGTCGTGCAGGGGCTTGCGTGCACCCCGACATCGCCGGCCG
GCATGACTGTCCAAATCGGGAAGGGCGAGATCTACCAACTCGAGAACCTGGAAGCGACCACGTGCGGCACGTTGCCGGCC
GACACGACCGATCAGATCCTCAAACAGGGCATTCAGCTCGAAACGTACATCAGCTCGGCGTTTGCGCCGCCCGGTACGAG
CGGGCAGTCGATCAGCTACCTGATCGAGGCGCAGTATCAGGACAGCGATATCAGCCTTGATCCGACCACCGGGAACGCTC
CGGTGGTGCTGCAGTTCTACAACGCCGCGAACCCGGCGACCCCGTGGTCAGGGCCCGGTAATACGGGTGCGACGAGCAAC
ACATTCCGCGATGGAGTGGTCGCATTTCAGGTGAAGGCCGGGATCCCTGCGACGAGCGGGACCCAGGCGACGCCGTCGCC
GGACACCGGCTGGGTGGGCCTTTGGGTGATCACTGTCGCGTTCGGCCAAACCTCGATCACGTCGGCGAACATCGCCCAGT
ACTCGGGCGCGCCGATTCTGCCGAGCGGCCTTCTTCAATCGGTTCAGACCGGCAACCTCAACTTCGGCACCGACGTTGGC
GCGGTCAACACGCTGCAGGCGAATTTCCCCGTTCCGTCTACGACTCTCACCGACAACCAGGCCTTCTGGGTGAAGGTGGC
GAACACGAATACCGGGGCGGCGACCTTCACCCCCAACCCGGGCGTAATCGCGGCTGCGCCCATCGTCGGCGTTTCCCAGA
GTGCTCTCACGGGCGGCGAGCTCGCCGCGGGCGGTCGTGCGCTGCTGCTCTGGCGTGCCGACATTTCCTCGTACGTGCTG
ATCACCTGTACTGGCAGTGTGCAGTTGGGAGCACCGCGCTTCCAGATTTTTACATCGAGCGGCAACTTCACCGTGCCGCC
CGGGGTGACGACGATCTATCGAACTGGCTGTGCCGGTGGGGGAGGTGGCGCCGGATCGCCGAACATCCCCGCCAACAACA
TCGTCGCCGGTTCTGCTGGTGGTGGTGCCGGTCGATCGTGGATCCGAAACCCAATGTCGGTGACACCTGGCCAGGTCGTT
CCGATCGTGATCGGAGCTGGCGGCGTAGCCGGCGCCGTCGGGGGCACCGGTGGCAACGGGAGCAACACCTCGGTGGGATC
TGACGTGCTGCCCGCGGGTGCAGGTGGCCAAGTGGGGAGCAGCGGCGCGCCGACGCAGGCATGGCCCGGCCAACCCGGCG
GCAACGGATTCCCGAACGGCGAATACGGCCAAGACACGTCCCAGTACGGACCTGGCGCGACGGGTGGCCGCGGTGGCGGC
GGCCCGTTCGGCGCGAGCGGAGCGCCCGGCCGCGGCGCGATTGGCGGCGTCGCCAACCTGATCGCCCCGTCCGCTTCCTA
TGGCTACGGCGTCGGCGGCTCCGGCGCGGGTGGGTCGTATGGCCCGACCACTACGACGGGGACCACTAACGGCTCCGTCG
GTACGCCCGGCATGCCCGGTTTCATGCTCATTGAATGGTGA

Upstream 100 bases:

>100_bases
TTTCGTACTGGATCAATCAACACTCGACTGATGCGGCAAGGGCCGCATTCACCTCCACCAAGCCCGCCTCGTGCGGGCTT
TTTCATTTTCAGGCCATCAC

Downstream 100 bases:

>100_bases
TCACGATGGCTCGATACGCATATTTCGACGCGCAGGTGAAGGCGGTGTTGGGCTGGATCGACACCGAGGCCTACGGCTAC
GCAGAGGATCCGCTCAAGGC

Product: Tail fiber protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MRRIETYIGQQVYEWTFSAQAQQTMVGLAKLSSAVLGTNTVVQGLACTPTSPAGMTVQIGKGEIYQLENLEATTCGTLPA
DTTDQILKQGIQLETYISSAFAPPGTSGQSISYLIEAQYQDSDISLDPTTGNAPVVLQFYNAANPATPWSGPGNTGATSN
TFRDGVVAFQVKAGIPATSGTQATPSPDTGWVGLWVITVAFGQTSITSANIAQYSGAPILPSGLLQSVQTGNLNFGTDVG
AVNTLQANFPVPSTTLTDNQAFWVKVANTNTGAATFTPNPGVIAAAPIVGVSQSALTGGELAAGGRALLLWRADISSYVL
ITCTGSVQLGAPRFQIFTSSGNFTVPPGVTTIYRTGCAGGGGGAGSPNIPANNIVAGSAGGGAGRSWIRNPMSVTPGQVV
PIVIGAGGVAGAVGGTGGNGSNTSVGSDVLPAGAGGQVGSSGAPTQAWPGQPGGNGFPNGEYGQDTSQYGPGATGGRGGG
GPFGASGAPGRGAIGGVANLIAPSASYGYGVGGSGAGGSYGPTTTTGTTNGSVGTPGMPGFMLIEW

Sequences:

>Translated_546_residues
MRRIETYIGQQVYEWTFSAQAQQTMVGLAKLSSAVLGTNTVVQGLACTPTSPAGMTVQIGKGEIYQLENLEATTCGTLPA
DTTDQILKQGIQLETYISSAFAPPGTSGQSISYLIEAQYQDSDISLDPTTGNAPVVLQFYNAANPATPWSGPGNTGATSN
TFRDGVVAFQVKAGIPATSGTQATPSPDTGWVGLWVITVAFGQTSITSANIAQYSGAPILPSGLLQSVQTGNLNFGTDVG
AVNTLQANFPVPSTTLTDNQAFWVKVANTNTGAATFTPNPGVIAAAPIVGVSQSALTGGELAAGGRALLLWRADISSYVL
ITCTGSVQLGAPRFQIFTSSGNFTVPPGVTTIYRTGCAGGGGGAGSPNIPANNIVAGSAGGGAGRSWIRNPMSVTPGQVV
PIVIGAGGVAGAVGGTGGNGSNTSVGSDVLPAGAGGQVGSSGAPTQAWPGQPGGNGFPNGEYGQDTSQYGPGATGGRGGG
GPFGASGAPGRGAIGGVANLIAPSASYGYGVGGSGAGGSYGPTTTTGTTNGSVGTPGMPGFMLIEW
>Mature_546_residues
MRRIETYIGQQVYEWTFSAQAQQTMVGLAKLSSAVLGTNTVVQGLACTPTSPAGMTVQIGKGEIYQLENLEATTCGTLPA
DTTDQILKQGIQLETYISSAFAPPGTSGQSISYLIEAQYQDSDISLDPTTGNAPVVLQFYNAANPATPWSGPGNTGATSN
TFRDGVVAFQVKAGIPATSGTQATPSPDTGWVGLWVITVAFGQTSITSANIAQYSGAPILPSGLLQSVQTGNLNFGTDVG
AVNTLQANFPVPSTTLTDNQAFWVKVANTNTGAATFTPNPGVIAAAPIVGVSQSALTGGELAAGGRALLLWRADISSYVL
ITCTGSVQLGAPRFQIFTSSGNFTVPPGVTTIYRTGCAGGGGGAGSPNIPANNIVAGSAGGGAGRSWIRNPMSVTPGQVV
PIVIGAGGVAGAVGGTGGNGSNTSVGSDVLPAGAGGQVGSSGAPTQAWPGQPGGNGFPNGEYGQDTSQYGPGATGGRGGG
GPFGASGAPGRGAIGGVANLIAPSASYGYGVGGSGAGGSYGPTTTTGTTNGSVGTPGMPGFMLIEW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53974; Mature: 53974

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIETYIGQQVYEWTFSAQAQQTMVGLAKLSSAVLGTNTVVQGLACTPTSPAGMTVQIG
CCHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHCCEEECCCCCCCEEEEEC
KGEIYQLENLEATTCGTLPADTTDQILKQGIQLETYISSAFAPPGTSGQSISYLIEAQYQ
CCCEEEECCCCEEECCCCCCCCHHHHHHCCCEEEEHHHHHCCCCCCCCCCEEEEEEEEEC
DSDISLDPTTGNAPVVLQFYNAANPATPWSGPGNTGATSNTFRDGVVAFQVKAGIPATSG
CCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
TQATPSPDTGWVGLWVITVAFGQTSITSANIAQYSGAPILPSGLLQSVQTGNLNFGTDVG
CCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCCCCCC
AVNTLQANFPVPSTTLTDNQAFWVKVANTNTGAATFTPNPGVIAAAPIVGVSQSALTGGE
CEEEEEECCCCCCCEEECCCEEEEEEECCCCCEEEECCCCCEEEECCEECCCHHHCCCCC
LAAGGRALLLWRADISSYVLITCTGSVQLGAPRFQIFTSSGNFTVPPGVTTIYRTGCAGG
CCCCCCEEEEEEECCCCEEEEEEECCEEECCCEEEEEECCCCEECCCCCCEEEECCCCCC
GGGAGSPNIPANNIVAGSAGGGAGRSWIRNPMSVTPGQVVPIVIGAGGVAGAVGGTGGNG
CCCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCEECCCCCCCCC
SNTSVGSDVLPAGAGGQVGSSGAPTQAWPGQPGGNGFPNGEYGQDTSQYGPGATGGRGGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC
GPFGASGAPGRGAIGGVANLIAPSASYGYGVGGSGAGGSYGPTTTTGTTNGSVGTPGMPG
CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FMLIEW
EEEEEC
>Mature Secondary Structure
MRRIETYIGQQVYEWTFSAQAQQTMVGLAKLSSAVLGTNTVVQGLACTPTSPAGMTVQIG
CCHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHCCEEECCCCCCCEEEEEC
KGEIYQLENLEATTCGTLPADTTDQILKQGIQLETYISSAFAPPGTSGQSISYLIEAQYQ
CCCEEEECCCCEEECCCCCCCCHHHHHHCCCEEEEHHHHHCCCCCCCCCCEEEEEEEEEC
DSDISLDPTTGNAPVVLQFYNAANPATPWSGPGNTGATSNTFRDGVVAFQVKAGIPATSG
CCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
TQATPSPDTGWVGLWVITVAFGQTSITSANIAQYSGAPILPSGLLQSVQTGNLNFGTDVG
CCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCCCCCC
AVNTLQANFPVPSTTLTDNQAFWVKVANTNTGAATFTPNPGVIAAAPIVGVSQSALTGGE
CEEEEEECCCCCCCEEECCCEEEEEEECCCCCEEEECCCCCEEEECCEECCCHHHCCCCC
LAAGGRALLLWRADISSYVLITCTGSVQLGAPRFQIFTSSGNFTVPPGVTTIYRTGCAGG
CCCCCCEEEEEEECCCCEEEEEEECCEEECCCEEEEEECCCCEECCCCCCEEEECCCCCC
GGGAGSPNIPANNIVAGSAGGGAGRSWIRNPMSVTPGQVVPIVIGAGGVAGAVGGTGGNG
CCCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCEECCCCCCCCC
SNTSVGSDVLPAGAGGQVGSSGAPTQAWPGQPGGNGFPNGEYGQDTSQYGPGATGGRGGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC
GPFGASGAPGRGAIGGVANLIAPSASYGYGVGGSGAGGSYGPTTTTGTTNGSVGTPGMPG
CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FMLIEW
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA