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The map label for this gene is scpB [H]

Identifier: 238027588

GI number: 238027588

Start: 2199478

End: 2200560

Strand: Reverse

Name: scpB [H]

Synonym: bglu_1g20060

Alternate gene names: 238027588

Gene position: 2200560-2199478 (Counterclockwise)

Preceding gene: 238027589

Following gene: 238027587

Centisome position: 56.33

GC content: 68.7

Gene sequence:

>1083_bases
ATGAATACCCAAGAGGCGAAGATCGTCCTCGAGACTGCTTTGATCTGTGCGCAGGAACCGCTCAAGTTAGGCGATCTGCG
CAAGCTCTTTGCCGATGGCGTGTCGGCGGACACGGTCCGCACGTTGCTCGAAGAATTGAAAGAGGCGTGGTCCGGCCGCG
GTGTCGAACTCGTCGCGCTGGCCACGGGCTGGCGCTTTCAGAGCAAGCCGGCGATGCGCGTTTATCTGGATCGATTGCAT
CCTGAAAAACCGCCGAAATATTCGCGCGCGGTACTCGAAACGCTGGCGATCATTGCGTATCGCCAGCCGGTCACGCGTGG
CGATATCGAGGAAATCCGCGGTGTGACGGTGAATACCCAGGTCGTCAAGCAACTCGAGGATCGCGGCTGGATCGAGGTGA
TCGGCCATCGCGACGTGCCGGGGCGCCCGGCGCTCTATGCGACCACGAAGCAGTTTCTCGACGATCTCGGGCTGAAGGCG
CTCGACGATCTGCCCGCGCTCGAAGAGCCCGCCGCGCACCTGGAGGCGAGCCTGCTGGCGCAGGCATCGATGGAATTCGC
CGATGGCGTGTCCGACGCCGATCCTGCCGTGCCTGCGGAGTTCCCGGAACACGGGGCGGCGCCGGCCGGCGCCCCGCTGC
AGCATGCGGACGCGGCGTCGGCCGGTGCGGAGACGGCCGGCCGGGAAGGCCCACGGGCCGGTGCCGCAGAGCAGGCGAAT
GCCGCAGTGCCGGCCGAGGCGCGGATCGGGCAGCCGGCGAGCGAAGCAGACACGGCTCAAGAGGCCGACGGCCGGTTTTC
CGGCCACGCCGACCCGCTCGGTGACGCGTCGGAACCCGCGTTGCCCGCTGCGGTCGAGAAGGAAACACCGGGCCGCGCGC
CCGATGCCGACGAGGCGGCGCGCGATCGCGCGGCGGGAGCGAGCCGCGCGACGGTGCAGGCTGGGCAGCAGGAGGCCGAT
TCGGCCGATGCAGACCCAGCACACGGCGACCACGCGCATGGCGAATCCGCCGAATCCCTGGGCGACGCGACGTCCGGCGA
GCAATCGCCGGATCGGGATGCGCCCACGCAGCGCCGCGCTTGA

Upstream 100 bases:

>100_bases
AATATGACCGATCAGAATCGGGCGAGCGCGTCTTCTGTTCCTTTTCGTCTGTTTCGTATTTTGATCCGGTTCGTTTGACC
AGAGGGTCTGGCCTAGCTGC

Downstream 100 bases:

>100_bases
CGCGGCCAGATGAGATTGCCGCGCCCGCGAGGGGCGCGAGACCTGACATTTCGAGGTTGTTTTGACAGATACCCACGACA
CTGATTCGTCCGAATCCGCG

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEELKEAWSGRGVELVALATGWRFQSKPAMRVYLDRLH
PEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQVVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKA
LDDLPALEEPAAHLEASLLAQASMEFADGVSDADPAVPAEFPEHGAAPAGAPLQHADAASAGAETAGREGPRAGAAEQAN
AAVPAEARIGQPASEADTAQEADGRFSGHADPLGDASEPALPAAVEKETPGRAPDADEAARDRAAGASRATVQAGQQEAD
SADADPAHGDHAHGESAESLGDATSGEQSPDRDAPTQRRA

Sequences:

>Translated_360_residues
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEELKEAWSGRGVELVALATGWRFQSKPAMRVYLDRLH
PEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQVVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKA
LDDLPALEEPAAHLEASLLAQASMEFADGVSDADPAVPAEFPEHGAAPAGAPLQHADAASAGAETAGREGPRAGAAEQAN
AAVPAEARIGQPASEADTAQEADGRFSGHADPLGDASEPALPAAVEKETPGRAPDADEAARDRAAGASRATVQAGQQEAD
SADADPAHGDHAHGESAESLGDATSGEQSPDRDAPTQRRA
>Mature_360_residues
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEELKEAWSGRGVELVALATGWRFQSKPAMRVYLDRLH
PEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQVVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKA
LDDLPALEEPAAHLEASLLAQASMEFADGVSDADPAVPAEFPEHGAAPAGAPLQHADAASAGAETAGREGPRAGAAEQAN
AAVPAEARIGQPASEADTAQEADGRFSGHADPLGDASEPALPAAVEKETPGRAPDADEAARDRAAGASRATVQAGQQEAD
SADADPAHGDHAHGESAESLGDATSGEQSPDRDAPTQRRA

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 37772; Mature: 37772

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEELKEAWSGRGVELVAL
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
ATGWRFQSKPAMRVYLDRLHPEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQ
ECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHH
VVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKALDDLPALEEPAAHLEASLLA
HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHH
QASMEFADGVSDADPAVPAEFPEHGAAPAGAPLQHADAASAGAETAGREGPRAGAAEQAN
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHCCCCCCCCCCCHHCC
AAVPAEARIGQPASEADTAQEADGRFSGHADPLGDASEPALPAAVEKETPGRAPDADEAA
CCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHH
RDRAAGASRATVQAGQQEADSADADPAHGDHAHGESAESLGDATSGEQSPDRDAPTQRRA
HHHHCCCCHHHHHHCHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEELKEAWSGRGVELVAL
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
ATGWRFQSKPAMRVYLDRLHPEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQ
ECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHH
VVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKALDDLPALEEPAAHLEASLLA
HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHH
QASMEFADGVSDADPAVPAEFPEHGAAPAGAPLQHADAASAGAETAGREGPRAGAAEQAN
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHCCCCCCCCCCCHHCC
AAVPAEARIGQPASEADTAQEADGRFSGHADPLGDASEPALPAAVEKETPGRAPDADEAA
CCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHH
RDRAAGASRATVQAGQQEADSADADPAHGDHAHGESAESLGDATSGEQSPDRDAPTQRRA
HHHHCCCCHHHHHHCHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]