Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027553
Identifier: 238027553
GI number: 238027553
Start: 2155431
End: 2156150
Strand: Reverse
Name: 238027553
Synonym: bglu_1g19710
Alternate gene names: NA
Gene position: 2156150-2155431 (Counterclockwise)
Preceding gene: 238027554
Following gene: 238027547
Centisome position: 55.19
GC content: 71.11
Gene sequence:
>720_bases ATGAGTCATAAACGGCTTTTGGGGCGCGCATTTGTTGCAGGATGGGTGGTGGTGGGGGGGCTGCAGCTTGCATCGGCCCA GGGTCTGGCCGGCAGCGACGCCGCCGCGGCGCCCGGTGCCGCCACCGGCGGCGTGGTGAATGCGGCGCCGGCCGCCGCCA GCGCGCTGCCGCCGACGACGCCCGCCGCCCAGGCGCCGGCGGGCGCCGCGACGCAGAGCACGATCGATGAACTGCAGCAG CTGATCCAGTCCCATGCGCTGACCGAGATGCGCACCGCCTATAACGGCAGCTATGGCGCGAGCCTGCTGTTCAACGTCCA GAGCGCGACCTATTACGTGGCCCTGTTCCAGCAGAAGGCGTTCTGGCGCGTGGTCAAGACCACCAGCGAGGCGCGTGCCG AAGCGGTGTTCCACGACTTCTCGAAGCAGGCCGAGTCGCTGGCCAGCTCGGAATTGCAGGCGACGCGGCTCGAGGCCCAG AAGGCACAGACGGACCGGCAGATCGCCGTGGTGCAGGAGCGCGCGAACCGCCTGCAGGCCGACCTGCAGGTCGCGCGCGA GCAGCAGGCCGCCGTCAACGACCGCCAGAAGGCCACCCGTGCCGAAGCGGCGGCGCTGCAGGCCCAGCGCGACGCGCTGC AGGCCCAGCTGCGCCAGTTGCAGATGCAGGTCCAGTCGCTGCAGCGTCAGGCCGACGCCGGGCTGCCGGGCACCCGCTGA
Upstream 100 bases:
>100_bases AGTATCAGATTTTCGACGAGGAACCCGAGGCGCGCGAAAGTGAGTGATAATGGCTGAATTGTGGTCAGAAATACAACTAA ATCTGTGCAGGAATCTCTAC
Downstream 100 bases:
>100_bases GGGCGGCGCGCGGCATGGCATGCGCCGCCTCGGGCGGACGCCATGCCGGCCGGGCGGACGGAAACGCGGATGTGAAGACG GCCGCAGAGGATGCGACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Exported Lipoprotein; Molecular Chaperone; Exported Protein
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MSHKRLLGRAFVAGWVVVGGLQLASAQGLAGSDAAAAPGAATGGVVNAAPAAASALPPTTPAAQAPAGAATQSTIDELQQ LIQSHALTEMRTAYNGSYGASLLFNVQSATYYVALFQQKAFWRVVKTTSEARAEAVFHDFSKQAESLASSELQATRLEAQ KAQTDRQIAVVQERANRLQADLQVAREQQAAVNDRQKATRAEAAALQAQRDALQAQLRQLQMQVQSLQRQADAGLPGTR
Sequences:
>Translated_239_residues MSHKRLLGRAFVAGWVVVGGLQLASAQGLAGSDAAAAPGAATGGVVNAAPAAASALPPTTPAAQAPAGAATQSTIDELQQ LIQSHALTEMRTAYNGSYGASLLFNVQSATYYVALFQQKAFWRVVKTTSEARAEAVFHDFSKQAESLASSELQATRLEAQ KAQTDRQIAVVQERANRLQADLQVAREQQAAVNDRQKATRAEAAALQAQRDALQAQLRQLQMQVQSLQRQADAGLPGTR >Mature_238_residues SHKRLLGRAFVAGWVVVGGLQLASAQGLAGSDAAAAPGAATGGVVNAAPAAASALPPTTPAAQAPAGAATQSTIDELQQL IQSHALTEMRTAYNGSYGASLLFNVQSATYYVALFQQKAFWRVVKTTSEARAEAVFHDFSKQAESLASSELQATRLEAQK AQTDRQIAVVQERANRLQADLQVAREQQAAVNDRQKATRAEAAALQAQRDALQAQLRQLQMQVQSLQRQADAGLPGTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25250; Mature: 25118
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHKRLLGRAFVAGWVVVGGLQLASAQGLAGSDAAAAPGAATGGVVNAAPAAASALPPTT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC PAAQAPAGAATQSTIDELQQLIQSHALTEMRTAYNGSYGASLLFNVQSATYYVALFQQKA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEECHHHHHHHHHHHHH FWRVVKTTSEARAEAVFHDFSKQAESLASSELQATRLEAQKAQTDRQIAVVQERANRLQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLQVAREQQAAVNDRQKATRAEAAALQAQRDALQAQLRQLQMQVQSLQRQADAGLPGTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SHKRLLGRAFVAGWVVVGGLQLASAQGLAGSDAAAAPGAATGGVVNAAPAAASALPPTT CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC PAAQAPAGAATQSTIDELQQLIQSHALTEMRTAYNGSYGASLLFNVQSATYYVALFQQKA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEECHHHHHHHHHHHHH FWRVVKTTSEARAEAVFHDFSKQAESLASSELQATRLEAQKAQTDRQIAVVQERANRLQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLQVAREQQAAVNDRQKATRAEAAALQAQRDALQAQLRQLQMQVQSLQRQADAGLPGTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA