Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027545
Identifier: 238027545
GI number: 238027545
Start: 2144645
End: 2145700
Strand: Reverse
Name: 238027545
Synonym: bglu_1g19630
Alternate gene names: NA
Gene position: 2145700-2144645 (Counterclockwise)
Preceding gene: 238027546
Following gene: 238027544
Centisome position: 54.93
GC content: 71.97
Gene sequence:
>1056_bases ATGGGCAACTGGCACGACACGCGTATCCTCGATCTGTTCGGCATCGAGTTGCCGATCATCCAGGCCCCGATGGCGGGCGC GACCACGGCCGCGATGGTGATCGCGGCGAGCGAGGCGGGCGGCCTCGGCTCGCTGCCGGCCGCGCTGCTGTCGGTCGAGC AGATGAAGGCCGCGCTCGACCAGATTCGCGGCGCGACACGCAAGCCGATCAACGTCAATTTCTTCTCGCATACCGACCCG GCGCCCGACCCCGCCGCGCAGATGGCGTGGCGCGCGGCGCTCGCGCGCTATTACGTCGAACTCGGGCTCGATCCTGCCGA GCCCGTGCCCTCGTCGAGCCGCGCGCCGTTCAGCGACGCCTATTGCGAGATCGTCGAGGCGTACCGGCCGGAAGTGGTCA GCTTCCACTTCGGCCTGCCCGAGACGCGGCTCGTCGAGCGCGTGAAGCGCGCCGGCGCGCGCGTGATCTCGTCGGCGACG ACGGTTGCGGAGGCGCGCTGGCTGGCCGAGCGCGGCGTGGACGCGATCATCGCGATGGGCTATGAGGCGGGCGGCCATCG CGGCAATTTCCTGTCGGACGACATGTCGACCCAGGTCGGCACCATCGCGCTGGTGCCGCAGATCGTCGATGCGGTGCCGG TGCCGGTGATCGCCGCGGGCGGCATCGCCGACCCGCGCGGTGTGCAGGCCGCGTTCGCGCTCGGCGCCTCGGCCGTGCAG ATCGGCACGGCCTACCTGCTGACGCCCGAGGCGAAGATCAGCGCGTTCCATCGCGAGGCGCTGCGCACGGCCGGCGAGGA CCAGACGGCGCTGACCAATTTGTTTACGGGCCGCCCGGCGCGCGGCATCACGAACCGGCTGATGCGCGAGATCGGGCCGA TCTCGGCGGCGGCGCCGGTGTTTCCGACCGCGGGCGGCGCGCTCGTGCCGCTGCGCACCGTCACCGAGAAGGCCGGCCGG GCCGACTTCAGCAACATGTGGGCGGGGCAGGCGGCGCGGCTCGCGCGCGAGATGTCGACGGCGGCGCTGACGCGGTATCT GGTGGGGGCGGGATGA
Upstream 100 bases:
>100_bases CGTCCGGCGGCCGGCTACGGTACGATGGCGCGTGAAGGCCATCATGCGCCCCGCGCTGGCCGGGCGCCACTCACTGCATC ATTCGCTGGAGCATGCACGC
Downstream 100 bases:
>100_bases ACGGTTGGGCTGCTTGCTGTCCGTTGCTCGCCGTCCCGCGTTTCGCGAGCGGCGTCCCGGCAAGCGGCGCGGGCTCCGTG CCTGCCGGGCAGCAATGAGA
Product: putative dioxygenase protein
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MGNWHDTRILDLFGIELPIIQAPMAGATTAAMVIAASEAGGLGSLPAALLSVEQMKAALDQIRGATRKPINVNFFSHTDP APDPAAQMAWRAALARYYVELGLDPAEPVPSSSRAPFSDAYCEIVEAYRPEVVSFHFGLPETRLVERVKRAGARVISSAT TVAEARWLAERGVDAIIAMGYEAGGHRGNFLSDDMSTQVGTIALVPQIVDAVPVPVIAAGGIADPRGVQAAFALGASAVQ IGTAYLLTPEAKISAFHREALRTAGEDQTALTNLFTGRPARGITNRLMREIGPISAAAPVFPTAGGALVPLRTVTEKAGR ADFSNMWAGQAARLAREMSTAALTRYLVGAG
Sequences:
>Translated_351_residues MGNWHDTRILDLFGIELPIIQAPMAGATTAAMVIAASEAGGLGSLPAALLSVEQMKAALDQIRGATRKPINVNFFSHTDP APDPAAQMAWRAALARYYVELGLDPAEPVPSSSRAPFSDAYCEIVEAYRPEVVSFHFGLPETRLVERVKRAGARVISSAT TVAEARWLAERGVDAIIAMGYEAGGHRGNFLSDDMSTQVGTIALVPQIVDAVPVPVIAAGGIADPRGVQAAFALGASAVQ IGTAYLLTPEAKISAFHREALRTAGEDQTALTNLFTGRPARGITNRLMREIGPISAAAPVFPTAGGALVPLRTVTEKAGR ADFSNMWAGQAARLAREMSTAALTRYLVGAG >Mature_350_residues GNWHDTRILDLFGIELPIIQAPMAGATTAAMVIAASEAGGLGSLPAALLSVEQMKAALDQIRGATRKPINVNFFSHTDPA PDPAAQMAWRAALARYYVELGLDPAEPVPSSSRAPFSDAYCEIVEAYRPEVVSFHFGLPETRLVERVKRAGARVISSATT VAEARWLAERGVDAIIAMGYEAGGHRGNFLSDDMSTQVGTIALVPQIVDAVPVPVIAAGGIADPRGVQAAFALGASAVQI GTAYLLTPEAKISAFHREALRTAGEDQTALTNLFTGRPARGITNRLMREIGPISAAAPVFPTAGGALVPLRTVTEKAGRA DFSNMWAGQAARLAREMSTAALTRYLVGAG
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=318, Percent_Identity=33.3333333333333, Blast_Score=158, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 36872; Mature: 36740
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNWHDTRILDLFGIELPIIQAPMAGATTAAMVIAASEAGGLGSLPAALLSVEQMKAALD CCCCCCCEEEHHHCCCCCCEECCCCCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHH QIRGATRKPINVNFFSHTDPAPDPAAQMAWRAALARYYVELGLDPAEPVPSSSRAPFSDA HHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH YCEIVEAYRPEVVSFHFGLPETRLVERVKRAGARVISSATTVAEARWLAERGVDAIIAMG HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC YEAGGHRGNFLSDDMSTQVGTIALVPQIVDAVPVPVIAAGGIADPRGVQAAFALGASAVQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHCCHHHH IGTAYLLTPEAKISAFHREALRTAGEDQTALTNLFTGRPARGITNRLMREIGPISAAAPV HCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC FPTAGGALVPLRTVTEKAGRADFSNMWAGQAARLAREMSTAALTRYLVGAG CCCCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GNWHDTRILDLFGIELPIIQAPMAGATTAAMVIAASEAGGLGSLPAALLSVEQMKAALD CCCCCCEEEHHHCCCCCCEECCCCCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHH QIRGATRKPINVNFFSHTDPAPDPAAQMAWRAALARYYVELGLDPAEPVPSSSRAPFSDA HHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH YCEIVEAYRPEVVSFHFGLPETRLVERVKRAGARVISSATTVAEARWLAERGVDAIIAMG HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC YEAGGHRGNFLSDDMSTQVGTIALVPQIVDAVPVPVIAAGGIADPRGVQAAFALGASAVQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHCCHHHH IGTAYLLTPEAKISAFHREALRTAGEDQTALTNLFTGRPARGITNRLMREIGPISAAAPV HCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC FPTAGGALVPLRTVTEKAGRADFSNMWAGQAARLAREMSTAALTRYLVGAG CCCCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA