Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027499
Identifier: 238027499
GI number: 238027499
Start: 2095164
End: 2096102
Strand: Reverse
Name: 238027499
Synonym: bglu_1g19130
Alternate gene names: NA
Gene position: 2096102-2095164 (Counterclockwise)
Preceding gene: 238027500
Following gene: 238027498
Centisome position: 53.66
GC content: 61.87
Gene sequence:
>939_bases TTGCTGCCCAGCTTTCCACTCGTCACGCTACTCACGCCCAACCGCGTAAAACGGTCCGTCTACGACCTCAACGCGGACTA TGTCCGCTCGCTCGAAATGATTCGGCAGCGCTGGGGGGGCAGCGGGACAATCCGAGAACGTCTCTGGAACCATGCGGCCA TGCTGCTGCGGCCAGACGCGATCGTAGGACGCCGTGCCGCGGCGGTGTTTCCTGCGCTGCGAGCACACGGATTCATACCG GTTGCGGTTCGTCGCGTTGCGCTGGATTCGCCGCGGACTTCCGCGCTGTGGATCTACCAAAGCAACGTGTCAACCCCGGA ACGACTCCGTCTCATGGACCGCTTGATGACATCCGCGCCGTCAGTGTATGTGGTACTGCGTGACGTCCGTTCGCGCACGA TGACGCCGGCGACGGTGCATGCCACTTACATCAAGGGGCCGACGGTGGCCGCAAAAAGAAAACGTGATCATTTACGCAGC CTGGTGGGGCCGCCCATTGCGAACCTACTGTCGTACATCCATATGGCTGATGATCCGGCCGATCTCGTGCGGGAAATGGG AGTATTGTTCGACGCGGCTGAACAAGCCGGAATACTCGCCGAAATCGACGCGCGACAGGATCGCACCGGTGTGGCTTTAC GGATCATTTCGCAACTAGAAGCGAGGCTGCCTGATTCGGGCGCGTTCGCCGCGGGCGGCTCCCAAGCGGGTGGCCTCGGT GGCGACACCTTAGCCAGCCAACTCGGCCGTTGCGACGCCTGCCCCCCCGAACTCCCGACCGACGCGGGGTGGAAAGCATT CGTGGAGGAAGCGATTAACTGCAAGAGCTTCATTTCCGGCGAGAGCTACGACACGAGCCTAGCGACGGTCCCAGACGACA AGCGCTTGTCCTTGCCGGTGGATACGTATCTGATCCGCGCCGAGTTCGGCCTGCCATAG
Upstream 100 bases:
>100_bases GTTGATTCGAGACAGGTTGCATGCAACCGGCGACTACGTTCGGGACGGCAAGCGAGTCGAGGACACCCGCGCAAATTGAC GTTTACGGAGAATCGAAAAG
Downstream 100 bases:
>100_bases GATAGGCACGATGCGTGAGCAGTTGGGGAAACTCCGCACGATGCAGAGCAATGGGCTGCGCGGCTTGCTGACCGAATACG GTGAAGTGATGAGCAAGTGA
Product: Nucleoside diphosphate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MLPSFPLVTLLTPNRVKRSVYDLNADYVRSLEMIRQRWGGSGTIRERLWNHAAMLLRPDAIVGRRAAAVFPALRAHGFIP VAVRRVALDSPRTSALWIYQSNVSTPERLRLMDRLMTSAPSVYVVLRDVRSRTMTPATVHATYIKGPTVAAKRKRDHLRS LVGPPIANLLSYIHMADDPADLVREMGVLFDAAEQAGILAEIDARQDRTGVALRIISQLEARLPDSGAFAAGGSQAGGLG GDTLASQLGRCDACPPELPTDAGWKAFVEEAINCKSFISGESYDTSLATVPDDKRLSLPVDTYLIRAEFGLP
Sequences:
>Translated_312_residues MLPSFPLVTLLTPNRVKRSVYDLNADYVRSLEMIRQRWGGSGTIRERLWNHAAMLLRPDAIVGRRAAAVFPALRAHGFIP VAVRRVALDSPRTSALWIYQSNVSTPERLRLMDRLMTSAPSVYVVLRDVRSRTMTPATVHATYIKGPTVAAKRKRDHLRS LVGPPIANLLSYIHMADDPADLVREMGVLFDAAEQAGILAEIDARQDRTGVALRIISQLEARLPDSGAFAAGGSQAGGLG GDTLASQLGRCDACPPELPTDAGWKAFVEEAINCKSFISGESYDTSLATVPDDKRLSLPVDTYLIRAEFGLP >Mature_312_residues MLPSFPLVTLLTPNRVKRSVYDLNADYVRSLEMIRQRWGGSGTIRERLWNHAAMLLRPDAIVGRRAAAVFPALRAHGFIP VAVRRVALDSPRTSALWIYQSNVSTPERLRLMDRLMTSAPSVYVVLRDVRSRTMTPATVHATYIKGPTVAAKRKRDHLRS LVGPPIANLLSYIHMADDPADLVREMGVLFDAAEQAGILAEIDARQDRTGVALRIISQLEARLPDSGAFAAGGSQAGGLG GDTLASQLGRCDACPPELPTDAGWKAFVEEAINCKSFISGESYDTSLATVPDDKRLSLPVDTYLIRAEFGLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34089; Mature: 34089
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPSFPLVTLLTPNRVKRSVYDLNADYVRSLEMIRQRWGGSGTIRERLWNHAAMLLRPDA CCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCHH IVGRRAAAVFPALRAHGFIPVAVRRVALDSPRTSALWIYQSNVSTPERLRLMDRLMTSAP HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC SVYVVLRDVRSRTMTPATVHATYIKGPTVAAKRKRDHLRSLVGPPIANLLSYIHMADDPA CEEEHEEHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH DLVREMGVLFDAAEQAGILAEIDARQDRTGVALRIISQLEARLPDSGAFAAGGSQAGGLG HHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GDTLASQLGRCDACPPELPTDAGWKAFVEEAINCKSFISGESYDTSLATVPDDKRLSLPV HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEECCH DTYLIRAEFGLP HHEEEEEECCCC >Mature Secondary Structure MLPSFPLVTLLTPNRVKRSVYDLNADYVRSLEMIRQRWGGSGTIRERLWNHAAMLLRPDA CCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCHH IVGRRAAAVFPALRAHGFIPVAVRRVALDSPRTSALWIYQSNVSTPERLRLMDRLMTSAP HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC SVYVVLRDVRSRTMTPATVHATYIKGPTVAAKRKRDHLRSLVGPPIANLLSYIHMADDPA CEEEHEEHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH DLVREMGVLFDAAEQAGILAEIDARQDRTGVALRIISQLEARLPDSGAFAAGGSQAGGLG HHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GDTLASQLGRCDACPPELPTDAGWKAFVEEAINCKSFISGESYDTSLATVPDDKRLSLPV HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEECCH DTYLIRAEFGLP HHEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA