Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027495

Identifier: 238027495

GI number: 238027495

Start: 2089021

End: 2089911

Strand: Reverse

Name: 238027495

Synonym: bglu_1g19080

Alternate gene names: NA

Gene position: 2089911-2089021 (Counterclockwise)

Preceding gene: 238027496

Following gene: 238027494

Centisome position: 53.5

GC content: 57.35

Gene sequence:

>891_bases
ATGCTTCCATTGGAAACAGTATTGACGCCCAATCGGATCAAACACCGCTATTATTGGGCAGACGCCGATTTTAGGCACGC
CATGGAGGTGATCCGTGGGCACTGGATTTGCACCGATCGGATCATCCATCGCCTGTGGAACTATGCAGCGCTGATACTGC
GTCCGGACGCGATTGCCGGCGGCCAGTCCGCCGCGGTGTTGCCGATGCTGCGGCAGCATGGATTCATACCGGTTGCCGTG
AAACGGGTTCACGTCGGCGCGTCGAGGGCTGAGGCACTTTGGCGCTACCAGTTCAACGTCGCCACGCCGGAACGGCGATC
TGTGCTTAAGCATTTGATGTCGATGGGCGATTCCGTCTACTTGATCGTGCGCGACGATACCGTCCGTACGTCCGCGCCCG
CCACGGTTCATCTGACGTACCTGAAGGGAACGGCCGTGATCGAGCGGCGGAAGCCCGGCCATCTCAGGACGGTGGCAGGA
CCCGCCGTGGCGAATATTTTTTCGTATGTGCATGTATCCGACGATCCAGCGGATGTCCTGCGCGAAATGGCTGTGTTATT
CGACGATTTCTCGATCCGGGCGCTGCTTGCACAAATCGATTCGGGGGTTGACCGCTCCGCCGAAGTTTACGCTGCGCTTC
GCGAGCTGCAATCGCTCGTTCCAAAAAATGCGCTGTTTCATGGCGTTGGTGCGTCGATAGACAGAGCGGTCGATGAAGAA
AAATGGCAAATCGCATCTGAGTGGCGTGACCTGGTTGAAAGAGCGAAACGAGTCAGAAATTTCATGACCGGCGAAAGCTA
TGCCGGAGCCGATGCGACGATTCCGGACGACACGGGGTTGTCGTTGCCTTTGGACGGACATCTTGTCTTTGCTGAATTGG
GCCTGAGGTAG

Upstream 100 bases:

>100_bases
TGAAACGCTGGCTGGCCTGCACTTCGTCGTTTTTGTCTCGTTGATGCTCGCTCGCGCTGTCCAGTATTTTTGAAAGTGCA
TAACACGCTCTAACGGTCCT

Downstream 100 bases:

>100_bases
AGCCCGACCGTCCGTTTCTGCATTGAGGAAAGGACATGACTGACACCAGAGCGGGCGAGGGCATGGAGTTGGCGGCGATT
CTGGCGCGCGTGCGGGACGC

Product: Nucleoside diphosphate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MLPLETVLTPNRIKHRYYWADADFRHAMEVIRGHWICTDRIIHRLWNYAALILRPDAIAGGQSAAVLPMLRQHGFIPVAV
KRVHVGASRAEALWRYQFNVATPERRSVLKHLMSMGDSVYLIVRDDTVRTSAPATVHLTYLKGTAVIERRKPGHLRTVAG
PAVANIFSYVHVSDDPADVLREMAVLFDDFSIRALLAQIDSGVDRSAEVYAALRELQSLVPKNALFHGVGASIDRAVDEE
KWQIASEWRDLVERAKRVRNFMTGESYAGADATIPDDTGLSLPLDGHLVFAELGLR

Sequences:

>Translated_296_residues
MLPLETVLTPNRIKHRYYWADADFRHAMEVIRGHWICTDRIIHRLWNYAALILRPDAIAGGQSAAVLPMLRQHGFIPVAV
KRVHVGASRAEALWRYQFNVATPERRSVLKHLMSMGDSVYLIVRDDTVRTSAPATVHLTYLKGTAVIERRKPGHLRTVAG
PAVANIFSYVHVSDDPADVLREMAVLFDDFSIRALLAQIDSGVDRSAEVYAALRELQSLVPKNALFHGVGASIDRAVDEE
KWQIASEWRDLVERAKRVRNFMTGESYAGADATIPDDTGLSLPLDGHLVFAELGLR
>Mature_296_residues
MLPLETVLTPNRIKHRYYWADADFRHAMEVIRGHWICTDRIIHRLWNYAALILRPDAIAGGQSAAVLPMLRQHGFIPVAV
KRVHVGASRAEALWRYQFNVATPERRSVLKHLMSMGDSVYLIVRDDTVRTSAPATVHLTYLKGTAVIERRKPGHLRTVAG
PAVANIFSYVHVSDDPADVLREMAVLFDDFSIRALLAQIDSGVDRSAEVYAALRELQSLVPKNALFHGVGASIDRAVDEE
KWQIASEWRDLVERAKRVRNFMTGESYAGADATIPDDTGLSLPLDGHLVFAELGLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33152; Mature: 33152

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00131 CARBOXYPEPT_SER_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPLETVLTPNRIKHRYYWADADFRHAMEVIRGHWICTDRIIHRLWNYAALILRPDAIAG
CCCCHHCCCCCHHCEEEEECCCHHHHHHHHHHCCCEEHHHHHHHHHHHHEEEECCCCCCC
GQSAAVLPMLRQHGFIPVAVKRVHVGASRAEALWRYQFNVATPERRSVLKHLMSMGDSVY
CCCHHHHHHHHHCCCEEEEHHEECCCCHHHHHHEEEEEECCCCHHHHHHHHHHHCCCCEE
LIVRDDTVRTSAPATVHLTYLKGTAVIERRKPGHLRTVAGPAVANIFSYVHVSDDPADVL
EEEECCCCCCCCCCEEEEEEECCEEEEECCCCCCEEEECCHHHHHHHHHEECCCCHHHHH
REMAVLFDDFSIRALLAQIDSGVDRSAEVYAALRELQSLVPKNALFHGVGASIDRAVDEE
HHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHH
KWQIASEWRDLVERAKRVRNFMTGESYAGADATIPDDTGLSLPLDGHLVFAELGLR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MLPLETVLTPNRIKHRYYWADADFRHAMEVIRGHWICTDRIIHRLWNYAALILRPDAIAG
CCCCHHCCCCCHHCEEEEECCCHHHHHHHHHHCCCEEHHHHHHHHHHHHEEEECCCCCCC
GQSAAVLPMLRQHGFIPVAVKRVHVGASRAEALWRYQFNVATPERRSVLKHLMSMGDSVY
CCCHHHHHHHHHCCCEEEEHHEECCCCHHHHHHEEEEEECCCCHHHHHHHHHHHCCCCEE
LIVRDDTVRTSAPATVHLTYLKGTAVIERRKPGHLRTVAGPAVANIFSYVHVSDDPADVL
EEEECCCCCCCCCCEEEEEEECCEEEEECCCCCCEEEECCHHHHHHHHHEECCCCHHHHH
REMAVLFDDFSIRALLAQIDSGVDRSAEVYAALRELQSLVPKNALFHGVGASIDRAVDEE
HHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHH
KWQIASEWRDLVERAKRVRNFMTGESYAGADATIPDDTGLSLPLDGHLVFAELGLR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA