Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027495
Identifier: 238027495
GI number: 238027495
Start: 2089021
End: 2089911
Strand: Reverse
Name: 238027495
Synonym: bglu_1g19080
Alternate gene names: NA
Gene position: 2089911-2089021 (Counterclockwise)
Preceding gene: 238027496
Following gene: 238027494
Centisome position: 53.5
GC content: 57.35
Gene sequence:
>891_bases ATGCTTCCATTGGAAACAGTATTGACGCCCAATCGGATCAAACACCGCTATTATTGGGCAGACGCCGATTTTAGGCACGC CATGGAGGTGATCCGTGGGCACTGGATTTGCACCGATCGGATCATCCATCGCCTGTGGAACTATGCAGCGCTGATACTGC GTCCGGACGCGATTGCCGGCGGCCAGTCCGCCGCGGTGTTGCCGATGCTGCGGCAGCATGGATTCATACCGGTTGCCGTG AAACGGGTTCACGTCGGCGCGTCGAGGGCTGAGGCACTTTGGCGCTACCAGTTCAACGTCGCCACGCCGGAACGGCGATC TGTGCTTAAGCATTTGATGTCGATGGGCGATTCCGTCTACTTGATCGTGCGCGACGATACCGTCCGTACGTCCGCGCCCG CCACGGTTCATCTGACGTACCTGAAGGGAACGGCCGTGATCGAGCGGCGGAAGCCCGGCCATCTCAGGACGGTGGCAGGA CCCGCCGTGGCGAATATTTTTTCGTATGTGCATGTATCCGACGATCCAGCGGATGTCCTGCGCGAAATGGCTGTGTTATT CGACGATTTCTCGATCCGGGCGCTGCTTGCACAAATCGATTCGGGGGTTGACCGCTCCGCCGAAGTTTACGCTGCGCTTC GCGAGCTGCAATCGCTCGTTCCAAAAAATGCGCTGTTTCATGGCGTTGGTGCGTCGATAGACAGAGCGGTCGATGAAGAA AAATGGCAAATCGCATCTGAGTGGCGTGACCTGGTTGAAAGAGCGAAACGAGTCAGAAATTTCATGACCGGCGAAAGCTA TGCCGGAGCCGATGCGACGATTCCGGACGACACGGGGTTGTCGTTGCCTTTGGACGGACATCTTGTCTTTGCTGAATTGG GCCTGAGGTAG
Upstream 100 bases:
>100_bases TGAAACGCTGGCTGGCCTGCACTTCGTCGTTTTTGTCTCGTTGATGCTCGCTCGCGCTGTCCAGTATTTTTGAAAGTGCA TAACACGCTCTAACGGTCCT
Downstream 100 bases:
>100_bases AGCCCGACCGTCCGTTTCTGCATTGAGGAAAGGACATGACTGACACCAGAGCGGGCGAGGGCATGGAGTTGGCGGCGATT CTGGCGCGCGTGCGGGACGC
Product: Nucleoside diphosphate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MLPLETVLTPNRIKHRYYWADADFRHAMEVIRGHWICTDRIIHRLWNYAALILRPDAIAGGQSAAVLPMLRQHGFIPVAV KRVHVGASRAEALWRYQFNVATPERRSVLKHLMSMGDSVYLIVRDDTVRTSAPATVHLTYLKGTAVIERRKPGHLRTVAG PAVANIFSYVHVSDDPADVLREMAVLFDDFSIRALLAQIDSGVDRSAEVYAALRELQSLVPKNALFHGVGASIDRAVDEE KWQIASEWRDLVERAKRVRNFMTGESYAGADATIPDDTGLSLPLDGHLVFAELGLR
Sequences:
>Translated_296_residues MLPLETVLTPNRIKHRYYWADADFRHAMEVIRGHWICTDRIIHRLWNYAALILRPDAIAGGQSAAVLPMLRQHGFIPVAV KRVHVGASRAEALWRYQFNVATPERRSVLKHLMSMGDSVYLIVRDDTVRTSAPATVHLTYLKGTAVIERRKPGHLRTVAG PAVANIFSYVHVSDDPADVLREMAVLFDDFSIRALLAQIDSGVDRSAEVYAALRELQSLVPKNALFHGVGASIDRAVDEE KWQIASEWRDLVERAKRVRNFMTGESYAGADATIPDDTGLSLPLDGHLVFAELGLR >Mature_296_residues MLPLETVLTPNRIKHRYYWADADFRHAMEVIRGHWICTDRIIHRLWNYAALILRPDAIAGGQSAAVLPMLRQHGFIPVAV KRVHVGASRAEALWRYQFNVATPERRSVLKHLMSMGDSVYLIVRDDTVRTSAPATVHLTYLKGTAVIERRKPGHLRTVAG PAVANIFSYVHVSDDPADVLREMAVLFDDFSIRALLAQIDSGVDRSAEVYAALRELQSLVPKNALFHGVGASIDRAVDEE KWQIASEWRDLVERAKRVRNFMTGESYAGADATIPDDTGLSLPLDGHLVFAELGLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33152; Mature: 33152
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS00131 CARBOXYPEPT_SER_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLETVLTPNRIKHRYYWADADFRHAMEVIRGHWICTDRIIHRLWNYAALILRPDAIAG CCCCHHCCCCCHHCEEEEECCCHHHHHHHHHHCCCEEHHHHHHHHHHHHEEEECCCCCCC GQSAAVLPMLRQHGFIPVAVKRVHVGASRAEALWRYQFNVATPERRSVLKHLMSMGDSVY CCCHHHHHHHHHCCCEEEEHHEECCCCHHHHHHEEEEEECCCCHHHHHHHHHHHCCCCEE LIVRDDTVRTSAPATVHLTYLKGTAVIERRKPGHLRTVAGPAVANIFSYVHVSDDPADVL EEEECCCCCCCCCCEEEEEEECCEEEEECCCCCCEEEECCHHHHHHHHHEECCCCHHHHH REMAVLFDDFSIRALLAQIDSGVDRSAEVYAALRELQSLVPKNALFHGVGASIDRAVDEE HHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHH KWQIASEWRDLVERAKRVRNFMTGESYAGADATIPDDTGLSLPLDGHLVFAELGLR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC >Mature Secondary Structure MLPLETVLTPNRIKHRYYWADADFRHAMEVIRGHWICTDRIIHRLWNYAALILRPDAIAG CCCCHHCCCCCHHCEEEEECCCHHHHHHHHHHCCCEEHHHHHHHHHHHHEEEECCCCCCC GQSAAVLPMLRQHGFIPVAVKRVHVGASRAEALWRYQFNVATPERRSVLKHLMSMGDSVY CCCHHHHHHHHHCCCEEEEHHEECCCCHHHHHHEEEEEECCCCHHHHHHHHHHHCCCCEE LIVRDDTVRTSAPATVHLTYLKGTAVIERRKPGHLRTVAGPAVANIFSYVHVSDDPADVL EEEECCCCCCCCCCEEEEEEECCEEEEECCCCCCEEEECCHHHHHHHHHEECCCCHHHHH REMAVLFDDFSIRALLAQIDSGVDRSAEVYAALRELQSLVPKNALFHGVGASIDRAVDEE HHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHH KWQIASEWRDLVERAKRVRNFMTGESYAGADATIPDDTGLSLPLDGHLVFAELGLR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA