Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027494
Identifier: 238027494
GI number: 238027494
Start: 2087485
End: 2088651
Strand: Reverse
Name: 238027494
Synonym: bglu_1g19070
Alternate gene names: NA
Gene position: 2088651-2087485 (Counterclockwise)
Preceding gene: 238027495
Following gene: 238027493
Centisome position: 53.47
GC content: 54.84
Gene sequence:
>1167_bases ATGACCGAGTTTTCGGACGATAGCTTGCTGATGAACGGGACTCGTGAGCAACGGACCCTAATAGCGCTTTCCATGGTGGA CAGGCAGGTCCCGGCCGCTTTCTTTGACGAGGTTTTTTCCGCGCGGCTCGATTGGCCCTGGATCGTCATGCAAGCCATGC ATCAGCGGGTACTTTGCTACGTGTGGGAAAACCTGAAGCACCGGAATCTCATCGGGCCGGCTGCGCGCAGTGGGCTGGTG AAGAATTGGATCACGTACATGGACCAGCTCAGCCAAGCCAATCTAGAAAAGAACACGCTTTGGCTGAACCTGCTCAGGCG TACAATCGAGGCAGTGAACAGGGCGGGTGTACCGATCGTATGCATCAAGGGTAGCGCCCTGATCGGCGACATCTATCATC CGGGCAATCGAATGCTGGGTGACGTCGACACGTTGATTCCCCAGAGCGCAGCAGCAGAGGTTTCGGCGGTGCTGAATGAG CTCGGGTTCGTCCAGGGCACGGTCAATTTCGTGAACAATACAGTCGAGCCTCTTTCGCGCGAAAAAATTCGATTTTGGAA TTTCAACGCGCATATTATGGCCAAATTCACGCTGTTGACGAACCACCCGAGCGTTCCGTTTTTTCGTTTCGCCGCAGGGT TCGATTTCTTCGACCCACACGATATCTATAGTTTTCCAAGTGACGCAGTACTGTCGCGGCGCGTGCCGAAAAGCGTCGAT CCGATCATTTCGATACCAGACGAAGCGGATATGGTGCTCAATTTGTGCATCCACATCTACCGCGAGGCCGTGTCGGCAAT TTTCGCCGCTTCGGCCGATAACTGGCACCTGGGTAAATTTAGCGACCTCAGAATCTATATTTTGAAGCACGACAGCGAAA CGTTGCGCAATGCGGTGAAAAGCCGTGTGGCGGAAAATCATCTGGAGAAACCTTACTATTTCGCGCTGCACTACACGCAG GCTGTGTACGGCGACTCCGCGCTGGCACCCTGGGCCAATCTCGTCGATCCAGGGGACGATAAGGAGTTCATTTATGAAAT GCTGGATGGAGAGCGCCGGGTCATGTATCGCGCACCGTTTTCCGAGCGGCTCTTCGATACGGCGGGCACGGAAATCCCCG GGCTCGACCCCGCGTGGAAAAAAGTGATGACCGACGACGCATGGTAG
Upstream 100 bases:
>100_bases GCCGCGATCGCAAGGGTGTTGTCCCGTTATGCCAAGTCCGGCCCCGACGCGTAGTGCTTGGGGACCGAGGTTAACGCGAC CGGCCGCAGAGGAGCAACCG
Downstream 100 bases:
>100_bases TACGAAGGCCAACGCGGTCGATTGATCAACCAGTAAATGCCGAATGGGCGACCGATGACGCAGACAGCGAGTAAAACAAC TATGAACCGCGACCCCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MTEFSDDSLLMNGTREQRTLIALSMVDRQVPAAFFDEVFSARLDWPWIVMQAMHQRVLCYVWENLKHRNLIGPAARSGLV KNWITYMDQLSQANLEKNTLWLNLLRRTIEAVNRAGVPIVCIKGSALIGDIYHPGNRMLGDVDTLIPQSAAAEVSAVLNE LGFVQGTVNFVNNTVEPLSREKIRFWNFNAHIMAKFTLLTNHPSVPFFRFAAGFDFFDPHDIYSFPSDAVLSRRVPKSVD PIISIPDEADMVLNLCIHIYREAVSAIFAASADNWHLGKFSDLRIYILKHDSETLRNAVKSRVAENHLEKPYYFALHYTQ AVYGDSALAPWANLVDPGDDKEFIYEMLDGERRVMYRAPFSERLFDTAGTEIPGLDPAWKKVMTDDAW
Sequences:
>Translated_388_residues MTEFSDDSLLMNGTREQRTLIALSMVDRQVPAAFFDEVFSARLDWPWIVMQAMHQRVLCYVWENLKHRNLIGPAARSGLV KNWITYMDQLSQANLEKNTLWLNLLRRTIEAVNRAGVPIVCIKGSALIGDIYHPGNRMLGDVDTLIPQSAAAEVSAVLNE LGFVQGTVNFVNNTVEPLSREKIRFWNFNAHIMAKFTLLTNHPSVPFFRFAAGFDFFDPHDIYSFPSDAVLSRRVPKSVD PIISIPDEADMVLNLCIHIYREAVSAIFAASADNWHLGKFSDLRIYILKHDSETLRNAVKSRVAENHLEKPYYFALHYTQ AVYGDSALAPWANLVDPGDDKEFIYEMLDGERRVMYRAPFSERLFDTAGTEIPGLDPAWKKVMTDDAW >Mature_387_residues TEFSDDSLLMNGTREQRTLIALSMVDRQVPAAFFDEVFSARLDWPWIVMQAMHQRVLCYVWENLKHRNLIGPAARSGLVK NWITYMDQLSQANLEKNTLWLNLLRRTIEAVNRAGVPIVCIKGSALIGDIYHPGNRMLGDVDTLIPQSAAAEVSAVLNEL GFVQGTVNFVNNTVEPLSREKIRFWNFNAHIMAKFTLLTNHPSVPFFRFAAGFDFFDPHDIYSFPSDAVLSRRVPKSVDP IISIPDEADMVLNLCIHIYREAVSAIFAASADNWHLGKFSDLRIYILKHDSETLRNAVKSRVAENHLEKPYYFALHYTQA VYGDSALAPWANLVDPGDDKEFIYEMLDGERRVMYRAPFSERLFDTAGTEIPGLDPAWKKVMTDDAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44193; Mature: 44062
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEFSDDSLLMNGTREQRTLIALSMVDRQVPAAFFDEVFSARLDWPWIVMQAMHQRVLCY CCCCCCCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VWENLKHRNLIGPAARSGLVKNWITYMDQLSQANLEKNTLWLNLLRRTIEAVNRAGVPIV HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEE CIKGSALIGDIYHPGNRMLGDVDTLIPQSAAAEVSAVLNELGFVQGTVNFVNNTVEPLSR EEECCEEEECCCCCCCCHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCC EKIRFWNFNAHIMAKFTLLTNHPSVPFFRFAAGFDFFDPHDIYSFPSDAVLSRRVPKSVD CCEEEEECCEEEEEEEEEEECCCCCCHHHHCCCCCCCCCCHHCCCCCHHHHHHCCCCCCC PIISIPDEADMVLNLCIHIYREAVSAIFAASADNWHLGKFSDLRIYILKHDSETLRNAVK CCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHH SRVAENHLEKPYYFALHYTQAVYGDSALAPWANLVDPGDDKEFIYEMLDGERRVMYRAPF HHHHHHHCCCCEEEEEEEHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHCCCCEEEEECCH SERLFDTAGTEIPGLDPAWKKVMTDDAW HHHHHHHCCCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure TEFSDDSLLMNGTREQRTLIALSMVDRQVPAAFFDEVFSARLDWPWIVMQAMHQRVLCY CCCCCCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VWENLKHRNLIGPAARSGLVKNWITYMDQLSQANLEKNTLWLNLLRRTIEAVNRAGVPIV HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEE CIKGSALIGDIYHPGNRMLGDVDTLIPQSAAAEVSAVLNELGFVQGTVNFVNNTVEPLSR EEECCEEEECCCCCCCCHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCC EKIRFWNFNAHIMAKFTLLTNHPSVPFFRFAAGFDFFDPHDIYSFPSDAVLSRRVPKSVD CCEEEEECCEEEEEEEEEEECCCCCCHHHHCCCCCCCCCCHHCCCCCHHHHHHCCCCCCC PIISIPDEADMVLNLCIHIYREAVSAIFAASADNWHLGKFSDLRIYILKHDSETLRNAVK CCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHH SRVAENHLEKPYYFALHYTQAVYGDSALAPWANLVDPGDDKEFIYEMLDGERRVMYRAPF HHHHHHHCCCCEEEEEEEHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHCCCCEEEEECCH SERLFDTAGTEIPGLDPAWKKVMTDDAW HHHHHHHCCCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA