Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027489

Identifier: 238027489

GI number: 238027489

Start: 2079325

End: 2080143

Strand: Reverse

Name: 238027489

Synonym: bglu_1g19000

Alternate gene names: NA

Gene position: 2080143-2079325 (Counterclockwise)

Preceding gene: 238027490

Following gene: 238027485

Centisome position: 53.25

GC content: 61.78

Gene sequence:

>819_bases
ATGAATATCGAGACGGCGCTCGAAGCGAATCCGGAGCTTTCCAAATCCGGCGAACCAAGCGTGCGTGCGCTCGACGACCC
AACGATGTCGCCCCAGCCGTTCGCTGCTTTCGATACCGCGGCGGGCGATACGGGTCTTGATGCCGCGCTGTCTCAGATAA
CGCCGGCAACGCGCGAAGTCATACCCTTTGTCAGCGTGCAGTTTGCTCGGACGCTTGCGCGGCTGGCCGTTCAGGCCCGG
TACCGCAGGAATGGCATCAAGCGTGGGTTCGAATGCCATCGAATCGTGCCGGTTGGCTCCCGTAATCGTGATAGCCAGCG
GGATGCCGCGTGCATCTACGACGATGTGTCGTTTCGATCCGAGCTTGCCTCGGTCCGTCGGGTTGGGGCCGGTTTCCTGC
CCCCCCGGGGGCTGGAGACGCTGGCTCCATCGAGGCTCGCGCGCTCCCAATCGATCTGGTCGTGTTCACGCAACCGACGC
AGCATCGCCAGATGCAGTCGCTGCCATACGCCGGCTGCTTGCCAATCTCGTAGACGTCGCCAGCACGTCATGCCGCTGCC
GAAGCCCAGCTCTTGTGGGAGGTCCTCCCACGGGATACCGGTTTGCAGCACATACAGGATGTCGTTGAGCGCAGCTCGAT
CATCGACCGTGCGCCGGCGTCCGCCTTTGGGTGATGGCGAGAACTCCGGAATCAGCGGTTCCAGCGCCACCCACAACTCG
TTGCTGATTTTGCGTCTTGCCATGCAGCGGACGATACGACGTATGCTGCATCATGTCCAGGTTGTGTTAGCGGCTCTTAG
AGCCGCCAACATAACCTAG

Upstream 100 bases:

>100_bases
CTAATATCTCGTATTATCGGCATTGCGTTTAGAGTCGCTAACACAAGTCATCCACGAATCTCGAGCAGATAACGGCGGCA
GCCAGGAAGAGCAAAGCAGC

Downstream 100 bases:

>100_bases
ACATGACGTAGCAGAAATCGTATCGTCTGCGATATGGCAAGACGCAAAATCAGCAACGAGTTGTGGGTGGCGCTGGAACC
GCTGATTCCGGAATTCACCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MNIETALEANPELSKSGEPSVRALDDPTMSPQPFAAFDTAAGDTGLDAALSQITPATREVIPFVSVQFARTLARLAVQAR
YRRNGIKRGFECHRIVPVGSRNRDSQRDAACIYDDVSFRSELASVRRVGAGFLPPRGLETLAPSRLARSQSIWSCSRNRR
SIARCSRCHTPAACQSRRRRQHVMPLPKPSSCGRSSHGIPVCSTYRMSLSAARSSTVRRRPPLGDGENSGISGSSATHNS
LLILRLAMQRTIRRMLHHVQVVLAALRAANIT

Sequences:

>Translated_272_residues
MNIETALEANPELSKSGEPSVRALDDPTMSPQPFAAFDTAAGDTGLDAALSQITPATREVIPFVSVQFARTLARLAVQAR
YRRNGIKRGFECHRIVPVGSRNRDSQRDAACIYDDVSFRSELASVRRVGAGFLPPRGLETLAPSRLARSQSIWSCSRNRR
SIARCSRCHTPAACQSRRRRQHVMPLPKPSSCGRSSHGIPVCSTYRMSLSAARSSTVRRRPPLGDGENSGISGSSATHNS
LLILRLAMQRTIRRMLHHVQVVLAALRAANIT
>Mature_272_residues
MNIETALEANPELSKSGEPSVRALDDPTMSPQPFAAFDTAAGDTGLDAALSQITPATREVIPFVSVQFARTLARLAVQAR
YRRNGIKRGFECHRIVPVGSRNRDSQRDAACIYDDVSFRSELASVRRVGAGFLPPRGLETLAPSRLARSQSIWSCSRNRR
SIARCSRCHTPAACQSRRRRQHVMPLPKPSSCGRSSHGIPVCSTYRMSLSAARSSTVRRRPPLGDGENSGISGSSATHNS
LLILRLAMQRTIRRMLHHVQVVLAALRAANIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29766; Mature: 29766

Theoretical pI: Translated: 11.88; Mature: 11.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIETALEANPELSKSGEPSVRALDDPTMSPQPFAAFDTAAGDTGLDAALSQITPATREV
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCHHHHHH
IPFVSVQFARTLARLAVQARYRRNGIKRGFECHRIVPVGSRNRDSQRDAACIYDDVSFRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH
ELASVRRVGAGFLPPRGLETLAPSRLARSQSIWSCSRNRRSIARCSRCHTPAACQSRRRR
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
QHVMPLPKPSSCGRSSHGIPVCSTYRMSLSAARSSTVRRRPPLGDGENSGISGSSATHNS
HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
LLILRLAMQRTIRRMLHHVQVVLAALRAANIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIETALEANPELSKSGEPSVRALDDPTMSPQPFAAFDTAAGDTGLDAALSQITPATREV
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCHHHHHH
IPFVSVQFARTLARLAVQARYRRNGIKRGFECHRIVPVGSRNRDSQRDAACIYDDVSFRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH
ELASVRRVGAGFLPPRGLETLAPSRLARSQSIWSCSRNRRSIARCSRCHTPAACQSRRRR
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
QHVMPLPKPSSCGRSSHGIPVCSTYRMSLSAARSSTVRRRPPLGDGENSGISGSSATHNS
HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
LLILRLAMQRTIRRMLHHVQVVLAALRAANIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA