| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027445
Identifier: 238027445
GI number: 238027445
Start: 2022745
End: 2023932
Strand: Reverse
Name: 238027445
Synonym: bglu_1g18480
Alternate gene names: NA
Gene position: 2023932-2022745 (Counterclockwise)
Preceding gene: 238027447
Following gene: 238027439
Centisome position: 51.81
GC content: 70.54
Gene sequence:
>1188_bases ATGACATCCCAGGCAGACAAGTTCACGATCGACGATTGCCTTCCCGCCGACCTCGGCCGCGCGCTGCTGGTCGGCCGCGT CTGGCGCAAGACGGCGAGCTTCGAGGGACCGTGCGTGGTGGCCGTGCGCGACGGCGAGGTGTTCGACATCACGGCCAGCG CGCCAACCACGGCCGACCTGTTCGACCTGCCCGATGCGGTCGAGGTGGCGCGCCGCGCCGAGGGCGAGCCGCTCGGCAGC GCGCGCGAGATACTCGCCGCGCAGCTCGGCGGCGGCCAACCCGCGATCCGGCTGCTCGCGCCGTGCGACGTGCAGGCCAT CAAGGCCTGCGGCGTGACCTTCGCGGTGAGCCTGATCGAGCGCGTGATCGAGGAGCAGGCGGGCGGCGACGCGAGCCGTG CCGACGAGGTGCGCGCCACCATCGCGCGCGCGATCGGCACCGATCTTTCGCGCGTCGTGCCCGGCTCCGAGGCGGCGCTG CGGCTCAAGCGGGAGTTGCAGGATCGCGGAGTGTGGTCGCAGTACCTGGAGGTCGGGATCGGTCCCGATGCCGAGGTGTT CACGAAATCGCAGCCGATGTCGGCGGTGGGCTTCGGCAGCGAGGTCGGCCTGCTGCCGATCTCGACCTGGAACAACCCCG AGCCGGAAGTGGTGCTGGCGGTGAACGCGCGCGGCGAGGCGGTGGGCGCCACGCTCGGCAACGACGTGAACCTGCGCGAC GTGGAGGGGCGCTCGGCGCTGCTGCTCGGCAAGTGCAAGGACAACAACGCGTCCTGCGCGATCGGACCGTTCGTGCGGCT GTTCGACGGCACGTTTACGATCGACACGGTGCGCGCTGCCTCGGTGGGGCTGCGCATCGACGGCAGCGACGGCTTCGAAC TCGACGGCGTCAGCCACATGTCGGAGATCAGCCGCGATCCGCTCGACCTGGTCGCCCAGACCTGCGGCACCCATCACCAG TATCCGGACGGCTTCATGCTGTTCCTCGGCACGATGTTCTCGCCGATCAAGGACCGCGATCAGGCCGGGGCCGGCTTCAC GCATCACCTCGGCGATCGCGTGACGATCTCCACGGCCTCGCTGGGCGCGCTCGTCAACCGCGTGTCGCTGTGTACCGAGG TGGCGCCCTGGCAGTTCGGCACGCGCGCGCTGTTCCGCAACCTGGCGGCGCGCGGGCTGGTGCGCTGA
Upstream 100 bases:
>100_bases CGCCGGCCTGTCCAGCTGGCTGGATTATACGTTCGCAGGTTGGACAGGCCGGGCGCTTGGCCCTAGCATCGGCCGCACCC CGATCAAGGAGACAGGATTC
Downstream 100 bases:
>100_bases GCGGCGGCCGCCGCGAGCCTGGCCGGCTGCGTCAGTCGCCCGCGTAGGCGTCGGCGATCGCCTGGCCGGCCGCGTCGAGA TCGACCGGATAGCGCAGCTG
Product: fumarylacetoacetate hydrolase
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Family Protein; Fumarylacetoacetate Hydrolase Family Protein-Like Protein; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomaerase; 2-Keto-3-Deoxyxylonate Dehydratase
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTSQADKFTIDDCLPADLGRALLVGRVWRKTASFEGPCVVAVRDGEVFDITASAPTTADLFDLPDAVEVARRAEGEPLGS AREILAAQLGGGQPAIRLLAPCDVQAIKACGVTFAVSLIERVIEEQAGGDASRADEVRATIARAIGTDLSRVVPGSEAAL RLKRELQDRGVWSQYLEVGIGPDAEVFTKSQPMSAVGFGSEVGLLPISTWNNPEPEVVLAVNARGEAVGATLGNDVNLRD VEGRSALLLGKCKDNNASCAIGPFVRLFDGTFTIDTVRAASVGLRIDGSDGFELDGVSHMSEISRDPLDLVAQTCGTHHQ YPDGFMLFLGTMFSPIKDRDQAGAGFTHHLGDRVTISTASLGALVNRVSLCTEVAPWQFGTRALFRNLAARGLVR
Sequences:
>Translated_395_residues MTSQADKFTIDDCLPADLGRALLVGRVWRKTASFEGPCVVAVRDGEVFDITASAPTTADLFDLPDAVEVARRAEGEPLGS AREILAAQLGGGQPAIRLLAPCDVQAIKACGVTFAVSLIERVIEEQAGGDASRADEVRATIARAIGTDLSRVVPGSEAAL RLKRELQDRGVWSQYLEVGIGPDAEVFTKSQPMSAVGFGSEVGLLPISTWNNPEPEVVLAVNARGEAVGATLGNDVNLRD VEGRSALLLGKCKDNNASCAIGPFVRLFDGTFTIDTVRAASVGLRIDGSDGFELDGVSHMSEISRDPLDLVAQTCGTHHQ YPDGFMLFLGTMFSPIKDRDQAGAGFTHHLGDRVTISTASLGALVNRVSLCTEVAPWQFGTRALFRNLAARGLVR >Mature_394_residues TSQADKFTIDDCLPADLGRALLVGRVWRKTASFEGPCVVAVRDGEVFDITASAPTTADLFDLPDAVEVARRAEGEPLGSA REILAAQLGGGQPAIRLLAPCDVQAIKACGVTFAVSLIERVIEEQAGGDASRADEVRATIARAIGTDLSRVVPGSEAALR LKRELQDRGVWSQYLEVGIGPDAEVFTKSQPMSAVGFGSEVGLLPISTWNNPEPEVVLAVNARGEAVGATLGNDVNLRDV EGRSALLLGKCKDNNASCAIGPFVRLFDGTFTIDTVRAASVGLRIDGSDGFELDGVSHMSEISRDPLDLVAQTCGTHHQY PDGFMLFLGTMFSPIKDRDQAGAGFTHHLGDRVTISTASLGALVNRVSLCTEVAPWQFGTRALFRNLAARGLVR
Specific function: Unknown
COG id: COG3970
COG function: function code R; Fumarylacetoacetate (FAA) hydrolase family protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41904; Mature: 41773
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQADKFTIDDCLPADLGRALLVGRVWRKTASFEGPCVVAVRDGEVFDITASAPTTADL CCCCCCCEEHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCCCHH FDLPDAVEVARRAEGEPLGSAREILAAQLGGGQPAIRLLAPCDVQAIKACGVTFAVSLIE HCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH RVIEEQAGGDASRADEVRATIARAIGTDLSRVVPGSEAALRLKRELQDRGVWSQYLEVGI HHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCC GPDAEVFTKSQPMSAVGFGSEVGLLPISTWNNPEPEVVLAVNARGEAVGATLGNDVNLRD CCCHHHEECCCCCCEECCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCEEE VEGRSALLLGKCKDNNASCAIGPFVRLFDGTFTIDTVRAASVGLRIDGSDGFELDGVSHM CCCCCEEEEEECCCCCCCEEHHHHHHHHCCEEEEEEHEEEEEEEEEECCCCCCCCCHHHH SEISRDPLDLVAQTCGTHHQYPDGFMLFLGTMFSPIKDRDQAGAGFTHHLGDRVTISTAS HHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEEHHH LGALVNRVSLCTEVAPWQFGTRALFRNLAARGLVR HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSQADKFTIDDCLPADLGRALLVGRVWRKTASFEGPCVVAVRDGEVFDITASAPTTADL CCCCCCEEHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCCCHH FDLPDAVEVARRAEGEPLGSAREILAAQLGGGQPAIRLLAPCDVQAIKACGVTFAVSLIE HCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH RVIEEQAGGDASRADEVRATIARAIGTDLSRVVPGSEAALRLKRELQDRGVWSQYLEVGI HHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCC GPDAEVFTKSQPMSAVGFGSEVGLLPISTWNNPEPEVVLAVNARGEAVGATLGNDVNLRD CCCHHHEECCCCCCEECCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCEEE VEGRSALLLGKCKDNNASCAIGPFVRLFDGTFTIDTVRAASVGLRIDGSDGFELDGVSHM CCCCCEEEEEECCCCCCCEEHHHHHHHHCCEEEEEEHEEEEEEEEEECCCCCCCCCHHHH SEISRDPLDLVAQTCGTHHQYPDGFMLFLGTMFSPIKDRDQAGAGFTHHLGDRVTISTAS HHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEEHHH LGALVNRVSLCTEVAPWQFGTRALFRNLAARGLVR HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA