| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is serB [C]
Identifier: 238027210
GI number: 238027210
Start: 1746100
End: 1746945
Strand: Reverse
Name: serB [C]
Synonym: bglu_1g15960
Alternate gene names: 238027210
Gene position: 1746945-1746100 (Counterclockwise)
Preceding gene: 238027211
Following gene: 238027204
Centisome position: 44.72
GC content: 70.45
Gene sequence:
>846_bases ATGACCACGAATCTCGTCATCCAGAGCGCAGCGCCGCTGTCCTCCACCCACCACACAACACTGCTGGCGCTCGCGCGCGG CCGCCGCCTCACGCCGATCGACGCGCACGCGATCCGCATCGAGGACGCACAGCCCGCGCAACGGCCCGACCTGTCGGTGT ACTGCGGCGTGCATGGGCTCGACGCCGCATTCGTCGAGGCCGGCCGCCGGCTCGGCGACTTCGGCCTGCTTGCGATGGAC ATGGATTCGACCCTGATCACGATCGAATGCATCGACGAAATCGCCGATTTCTGCGGACGCAAGGCCGAGGTGGCGGCCAT CACCGAAGCCTCGATGCGCGGCGAGATCAGGGATTTCAACGAGAGCCTGACGCGCCGCGTCGCGCTGCTGGCCGGGCTCG ACGCCAGCGCGCTCGAGGCCGTCTACGCCGAGCGGCTGCGCCTGTCGCCGGGCGCCGAGACGATGCTGGCCGGCGCCCGC GCCGCGGGCCTGAAGACGCTGCTGGTGTCGGGCGGCTTCACGTTCTTCACCGAGCGGCTCGGCGAGCGGCTCGGCATCGA CTTCACCCGCGCGAACCAGCTCGAGATCGTCGACGGCAAGCTGACCGGCAAGGTGCTCGGCGAGATCGTCGATGCCGACG TGAAGGCGCGCACGCTGCGCGAGACCTGCGCGACGCTCGGCATCGCGCCGGCCTGCGCGATCGCGATGGGCGACGGCTCG AACGACCTGAAGATGATGGCCGCGGCCGGCTTCTCGGTCGCGTTCCGGGCCAAGCCGGTGGTGCGCGACGCCGCCAGCGC CGCCTTCGACCACGTCGGGCTCGACGGCCTGCTGCGACTGTTCTGA
Upstream 100 bases:
>100_bases CGATCCCGGCCTCGCCTGAGGGCCCGCGCGCGCCGACCGGCTACAATAGCGACCTCTTGCGGCGCGCCTGGCGCGCCGTT TCCGCCCCACGCGACCCGTC
Downstream 100 bases:
>100_bases GGCGCTCGCGCGCCTTGCCGCGGCGCGCCCATGCCAGCGGCGCATCGGCCCGGACCGGCACGCCGTTGCTGCTGATGAAC GCAGCCGCGCCGCCACGCCG
Product: phosphoserine phosphatase SerB
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MTTNLVIQSAAPLSSTHHTTLLALARGRRLTPIDAHAIRIEDAQPAQRPDLSVYCGVHGLDAAFVEAGRRLGDFGLLAMD MDSTLITIECIDEIADFCGRKAEVAAITEASMRGEIRDFNESLTRRVALLAGLDASALEAVYAERLRLSPGAETMLAGAR AAGLKTLLVSGGFTFFTERLGERLGIDFTRANQLEIVDGKLTGKVLGEIVDADVKARTLRETCATLGIAPACAIAMGDGS NDLKMMAAAGFSVAFRAKPVVRDAASAAFDHVGLDGLLRLF
Sequences:
>Translated_281_residues MTTNLVIQSAAPLSSTHHTTLLALARGRRLTPIDAHAIRIEDAQPAQRPDLSVYCGVHGLDAAFVEAGRRLGDFGLLAMD MDSTLITIECIDEIADFCGRKAEVAAITEASMRGEIRDFNESLTRRVALLAGLDASALEAVYAERLRLSPGAETMLAGAR AAGLKTLLVSGGFTFFTERLGERLGIDFTRANQLEIVDGKLTGKVLGEIVDADVKARTLRETCATLGIAPACAIAMGDGS NDLKMMAAAGFSVAFRAKPVVRDAASAAFDHVGLDGLLRLF >Mature_280_residues TTNLVIQSAAPLSSTHHTTLLALARGRRLTPIDAHAIRIEDAQPAQRPDLSVYCGVHGLDAAFVEAGRRLGDFGLLAMDM DSTLITIECIDEIADFCGRKAEVAAITEASMRGEIRDFNESLTRRVALLAGLDASALEAVYAERLRLSPGAETMLAGARA AGLKTLLVSGGFTFFTERLGERLGIDFTRANQLEIVDGKLTGKVLGEIVDADVKARTLRETCATLGIAPACAIAMGDGSN DLKMMAAAGFSVAFRAKPVVRDAASAAFDHVGLDGLLRLF
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1790849, Length=204, Percent_Identity=48.5294117647059, Blast_Score=174, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6321647, Length=207, Percent_Identity=39.6135265700483, Blast_Score=144, Evalue=2e-35, Organism=Drosophila melanogaster, GI24661601, Length=188, Percent_Identity=26.063829787234, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 29790; Mature: 29658
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNLVIQSAAPLSSTHHTTLLALARGRRLTPIDAHAIRIEDAQPAQRPDLSVYCGVHGL CCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCC DAAFVEAGRRLGDFGLLAMDMDSTLITIECIDEIADFCGRKAEVAAITEASMRGEIRDFN HHHHHHHCHHCCCCCEEEEECCCCEEEHHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHH ESLTRRVALLAGLDASALEAVYAERLRLSPGAETMLAGARAAGLKTLLVSGGFTFFTERL HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHH GERLGIDFTRANQLEIVDGKLTGKVLGEIVDADVKARTLRETCATLGIAPACAIAMGDGS HHHHCCEEECCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHEEEEECCCC NDLKMMAAAGFSVAFRAKPVVRDAASAAFDHVGLDGLLRLF CCCEEEECCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHCC >Mature Secondary Structure TTNLVIQSAAPLSSTHHTTLLALARGRRLTPIDAHAIRIEDAQPAQRPDLSVYCGVHGL CCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCC DAAFVEAGRRLGDFGLLAMDMDSTLITIECIDEIADFCGRKAEVAAITEASMRGEIRDFN HHHHHHHCHHCCCCCEEEEECCCCEEEHHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHH ESLTRRVALLAGLDASALEAVYAERLRLSPGAETMLAGARAAGLKTLLVSGGFTFFTERL HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHH GERLGIDFTRANQLEIVDGKLTGKVLGEIVDADVKARTLRETCATLGIAPACAIAMGDGS HHHHCCEEECCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHEEEEECCCC NDLKMMAAAGFSVAFRAKPVVRDAASAAFDHVGLDGLLRLF CCCEEEECCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]