| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027203
Identifier: 238027203
GI number: 238027203
Start: 1737628
End: 1738251
Strand: Reverse
Name: 238027203
Synonym: bglu_1g15890
Alternate gene names: NA
Gene position: 1738251-1737628 (Counterclockwise)
Preceding gene: 238027204
Following gene: 238027199
Centisome position: 44.5
GC content: 46.96
Gene sequence:
>624_bases ATGTCAATGACGCCAAGAGACTTTCCCGAGCTTTCCGCTAAACATGTAAGCGGCGCGAAGCTGTACGCAAACCGCTTTGA TCTCGTCGCCGACTTGCAGATCAAAGAATCACCTCTCATCGCGGAGATCGGTGTCGCGCTCGGAACGTTCTCGAAATTCA TGATCGAGCGGTTCAAGCCAAAACAGTTTCACGCATTCGATCTATTTCAGATTCATCAAGATGCCACACTCTGGGGCAAG CCGACCAGTGAAGTATTAGACGGCCTAACTCATCTTGAGTTCTATCAAAGAGCTATGCTCAATAGCCCTTCTCTTGTTGT AACCCATGCAGGTCTGAGCGGCAACACGCTGCAAAAAATTCCGGATTCTTTCTTTGATCTCATTTATGTCGATGCGGCGC ACGCATATGACGAGGTCAAGGAAGATGCAAAACTGTCATCACGCAAGCTAAAGCATGATGGAATCATCATATTTAACGAC TACATCATGTACGACCCATTTGTAAAAGCCGAATACGGAATCGTCCCCGTTGTGAATGAAATGGTCGTCAACCAAGGCTG GAAAGTAATTGGCTTCGCTCTGCAGAAAGATATGTTCTGCGACATCGCTATTCAGCGCCAATAA
Upstream 100 bases:
>100_bases GATGGGAGCAAGTTGCCCGAGGACAGCGCCCTTCGCTCGTTCCCGACTTTTTCTAAATCGGCTATGATCGCGGATCCAAG GGCCAACTGAGAGCGCATCA
Downstream 100 bases:
>100_bases CCGACTATTGCATGGGCGACGCGAGCGCAGCGATCACACGGTCGATTGCGTGGTCCTCGACGTTGGGAAACGGCAGCACT GGCGCGCCGATGTGCGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSMTPRDFPELSAKHVSGAKLYANRFDLVADLQIKESPLIAEIGVALGTFSKFMIERFKPKQFHAFDLFQIHQDATLWGK PTSEVLDGLTHLEFYQRAMLNSPSLVVTHAGLSGNTLQKIPDSFFDLIYVDAAHAYDEVKEDAKLSSRKLKHDGIIIFND YIMYDPFVKAEYGIVPVVNEMVVNQGWKVIGFALQKDMFCDIAIQRQ
Sequences:
>Translated_207_residues MSMTPRDFPELSAKHVSGAKLYANRFDLVADLQIKESPLIAEIGVALGTFSKFMIERFKPKQFHAFDLFQIHQDATLWGK PTSEVLDGLTHLEFYQRAMLNSPSLVVTHAGLSGNTLQKIPDSFFDLIYVDAAHAYDEVKEDAKLSSRKLKHDGIIIFND YIMYDPFVKAEYGIVPVVNEMVVNQGWKVIGFALQKDMFCDIAIQRQ >Mature_206_residues SMTPRDFPELSAKHVSGAKLYANRFDLVADLQIKESPLIAEIGVALGTFSKFMIERFKPKQFHAFDLFQIHQDATLWGKP TSEVLDGLTHLEFYQRAMLNSPSLVVTHAGLSGNTLQKIPDSFFDLIYVDAAHAYDEVKEDAKLSSRKLKHDGIIIFNDY IMYDPFVKAEYGIVPVVNEMVVNQGWKVIGFALQKDMFCDIAIQRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23477; Mature: 23346
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMTPRDFPELSAKHVSGAKLYANRFDLVADLQIKESPLIAEIGVALGTFSKFMIERFKP CCCCCCCCCHHHHHHCCCHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC KQFHAFDLFQIHQDATLWGKPTSEVLDGLTHLEFYQRAMLNSPSLVVTHAGLSGNTLQKI CCCCEEHHEEECCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH PDSFFDLIYVDAAHAYDEVKEDAKLSSRKLKHDGIIIFNDYIMYDPFVKAEYGIVPVVNE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECEEEECCCCCCCCCCHHHHHH MVVNQGWKVIGFALQKDMFCDIAIQRQ HHHHCCCCEEHHHHHHCCEEEEEEECC >Mature Secondary Structure SMTPRDFPELSAKHVSGAKLYANRFDLVADLQIKESPLIAEIGVALGTFSKFMIERFKP CCCCCCCCHHHHHHCCCHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC KQFHAFDLFQIHQDATLWGKPTSEVLDGLTHLEFYQRAMLNSPSLVVTHAGLSGNTLQKI CCCCEEHHEEECCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH PDSFFDLIYVDAAHAYDEVKEDAKLSSRKLKHDGIIIFNDYIMYDPFVKAEYGIVPVVNE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECEEEECCCCCCCCCCHHHHHH MVVNQGWKVIGFALQKDMFCDIAIQRQ HHHHCCCCEEHHHHHHCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA