Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027047

Identifier: 238027047

GI number: 238027047

Start: 1568741

End: 1569382

Strand: Reverse

Name: 238027047

Synonym: bglu_1g14250

Alternate gene names: NA

Gene position: 1569382-1568741 (Counterclockwise)

Preceding gene: 238027048

Following gene: 238027046

Centisome position: 40.17

GC content: 73.68

Gene sequence:

>642_bases
ATGCTGAAGACGCTGCTGATGCTGCTCGTCGCACTGTCGCTGTCACTCACGGCCAGCTTCGCGGCCGCCGTGGAGGTCAA
CACCGCCGATCAGGCGGCACTCGAATCGGTGAAGGGCCTGGGGCCGGTGAAATCGAAGGCGATCATCGACGAGCGGACGA
AAAACGGCCCGTTCAAGAGCGCGGACGATCTCGCGAACCGCGTGAAGGGACTCGGCCAGAAGTCGGTCGCGAACCTCGAG
GCGGCGGGCCTGACGATCGGCGGCTCGACGGCACCGCCGACCGGCGCGCAGGCGGCCCCGGCGGCCGGCTCGCGTGGGCC
CAGGACCCAGGCGGCCACCGGCGCCCCGGCCCCGACCGCCGCACCGACCTCGACGGCCACGACGGCACCGGTCGCCACCG
CCGCGGCCCCGGCATCGGCCGCCGGCGCGGCCCGCAACGGGGCCAACAACGGCGCCAACAACGCGCCCACCCAATCGGCC
CGAGGCAAGCGCGCCGCCAAGCAGCAGGACAAGGCGGCAGCGGCCGGCGCATCGGCAGTCTCGACGCCCGTGGCCGCAGG
CCCGGCGCCGAAGGCGAAGAACCCGCGCAAGGCAAAGAAGAATCAGGCCGCCTCGGCCGCGACGGGGGCCTCGGCCAGCT
GA

Upstream 100 bases:

>100_bases
AGGCCGGATTGCGACCTGACGGCAGCCCGCCTTGCGTGATCGTCGGCGCGTTCCAACAGCGGTTCGACCGCTCAACTGGG
GAGTCCTTGTCATGCAGAAC

Downstream 100 bases:

>100_bases
GCGGCACGGCCGCCACGCCGCGGCTCGCGCGGGCGCGGCGGGCTCCCGCATCGGCCGGCGCCGCACGGCGCCGGCCCGGA
AAACCGGCATCATTCATCGG

Product: putative comE protein

Products: NA

Alternate protein names: ComEA-Related Signal Peptide Protein; Competence Protein ComEA Helix-Hairpin-Helix Region; DNA Uptake Protein ComEA-Like; Helix-Turn-Helix Protein; DNA Uptake Protein; ComE Protein; Helix-Hairpin-Helix Motif Protein

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MLKTLLMLLVALSLSLTASFAAAVEVNTADQAALESVKGLGPVKSKAIIDERTKNGPFKSADDLANRVKGLGQKSVANLE
AAGLTIGGSTAPPTGAQAAPAAGSRGPRTQAATGAPAPTAAPTSTATTAPVATAAAPASAAGAARNGANNGANNAPTQSA
RGKRAAKQQDKAAAAGASAVSTPVAAGPAPKAKNPRKAKKNQAASAATGASAS

Sequences:

>Translated_213_residues
MLKTLLMLLVALSLSLTASFAAAVEVNTADQAALESVKGLGPVKSKAIIDERTKNGPFKSADDLANRVKGLGQKSVANLE
AAGLTIGGSTAPPTGAQAAPAAGSRGPRTQAATGAPAPTAAPTSTATTAPVATAAAPASAAGAARNGANNGANNAPTQSA
RGKRAAKQQDKAAAAGASAVSTPVAAGPAPKAKNPRKAKKNQAASAATGASAS
>Mature_213_residues
MLKTLLMLLVALSLSLTASFAAAVEVNTADQAALESVKGLGPVKSKAIIDERTKNGPFKSADDLANRVKGLGQKSVANLE
AAGLTIGGSTAPPTGAQAAPAAGSRGPRTQAATGAPAPTAAPTSTATTAPVATAAAPASAAGAARNGANNGANNAPTQSA
RGKRAAKQQDKAAAAGASAVSTPVAAGPAPKAKNPRKAKKNQAASAATGASAS

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20365; Mature: 20365

Theoretical pI: Translated: 11.49; Mature: 11.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTLLMLLVALSLSLTASFAAAVEVNTADQAALESVKGLGPVKSKAIIDERTKNGPFKS
CHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
ADDLANRVKGLGQKSVANLEAAGLTIGGSTAPPTGAQAAPAAGSRGPRTQAATGAPAPTA
HHHHHHHHHHCCHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APTSTATTAPVATAAAPASAAGAARNGANNGANNAPTQSARGKRAAKQQDKAAAAGASAV
CCCCCCCCCCHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHH
STPVAAGPAPKAKNPRKAKKNQAASAATGASAS
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLKTLLMLLVALSLSLTASFAAAVEVNTADQAALESVKGLGPVKSKAIIDERTKNGPFKS
CHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
ADDLANRVKGLGQKSVANLEAAGLTIGGSTAPPTGAQAAPAAGSRGPRTQAATGAPAPTA
HHHHHHHHHHCCHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APTSTATTAPVATAAAPASAAGAARNGANNGANNAPTQSARGKRAAKQQDKAAAAGASAV
CCCCCCCCCCHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHH
STPVAAGPAPKAKNPRKAKKNQAASAATGASAS
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA