| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027047
Identifier: 238027047
GI number: 238027047
Start: 1568741
End: 1569382
Strand: Reverse
Name: 238027047
Synonym: bglu_1g14250
Alternate gene names: NA
Gene position: 1569382-1568741 (Counterclockwise)
Preceding gene: 238027048
Following gene: 238027046
Centisome position: 40.17
GC content: 73.68
Gene sequence:
>642_bases ATGCTGAAGACGCTGCTGATGCTGCTCGTCGCACTGTCGCTGTCACTCACGGCCAGCTTCGCGGCCGCCGTGGAGGTCAA CACCGCCGATCAGGCGGCACTCGAATCGGTGAAGGGCCTGGGGCCGGTGAAATCGAAGGCGATCATCGACGAGCGGACGA AAAACGGCCCGTTCAAGAGCGCGGACGATCTCGCGAACCGCGTGAAGGGACTCGGCCAGAAGTCGGTCGCGAACCTCGAG GCGGCGGGCCTGACGATCGGCGGCTCGACGGCACCGCCGACCGGCGCGCAGGCGGCCCCGGCGGCCGGCTCGCGTGGGCC CAGGACCCAGGCGGCCACCGGCGCCCCGGCCCCGACCGCCGCACCGACCTCGACGGCCACGACGGCACCGGTCGCCACCG CCGCGGCCCCGGCATCGGCCGCCGGCGCGGCCCGCAACGGGGCCAACAACGGCGCCAACAACGCGCCCACCCAATCGGCC CGAGGCAAGCGCGCCGCCAAGCAGCAGGACAAGGCGGCAGCGGCCGGCGCATCGGCAGTCTCGACGCCCGTGGCCGCAGG CCCGGCGCCGAAGGCGAAGAACCCGCGCAAGGCAAAGAAGAATCAGGCCGCCTCGGCCGCGACGGGGGCCTCGGCCAGCT GA
Upstream 100 bases:
>100_bases AGGCCGGATTGCGACCTGACGGCAGCCCGCCTTGCGTGATCGTCGGCGCGTTCCAACAGCGGTTCGACCGCTCAACTGGG GAGTCCTTGTCATGCAGAAC
Downstream 100 bases:
>100_bases GCGGCACGGCCGCCACGCCGCGGCTCGCGCGGGCGCGGCGGGCTCCCGCATCGGCCGGCGCCGCACGGCGCCGGCCCGGA AAACCGGCATCATTCATCGG
Product: putative comE protein
Products: NA
Alternate protein names: ComEA-Related Signal Peptide Protein; Competence Protein ComEA Helix-Hairpin-Helix Region; DNA Uptake Protein ComEA-Like; Helix-Turn-Helix Protein; DNA Uptake Protein; ComE Protein; Helix-Hairpin-Helix Motif Protein
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MLKTLLMLLVALSLSLTASFAAAVEVNTADQAALESVKGLGPVKSKAIIDERTKNGPFKSADDLANRVKGLGQKSVANLE AAGLTIGGSTAPPTGAQAAPAAGSRGPRTQAATGAPAPTAAPTSTATTAPVATAAAPASAAGAARNGANNGANNAPTQSA RGKRAAKQQDKAAAAGASAVSTPVAAGPAPKAKNPRKAKKNQAASAATGASAS
Sequences:
>Translated_213_residues MLKTLLMLLVALSLSLTASFAAAVEVNTADQAALESVKGLGPVKSKAIIDERTKNGPFKSADDLANRVKGLGQKSVANLE AAGLTIGGSTAPPTGAQAAPAAGSRGPRTQAATGAPAPTAAPTSTATTAPVATAAAPASAAGAARNGANNGANNAPTQSA RGKRAAKQQDKAAAAGASAVSTPVAAGPAPKAKNPRKAKKNQAASAATGASAS >Mature_213_residues MLKTLLMLLVALSLSLTASFAAAVEVNTADQAALESVKGLGPVKSKAIIDERTKNGPFKSADDLANRVKGLGQKSVANLE AAGLTIGGSTAPPTGAQAAPAAGSRGPRTQAATGAPAPTAAPTSTATTAPVATAAAPASAAGAARNGANNGANNAPTQSA RGKRAAKQQDKAAAAGASAVSTPVAAGPAPKAKNPRKAKKNQAASAATGASAS
Specific function: Unknown
COG id: COG1555
COG function: function code L; DNA uptake protein and related DNA-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20365; Mature: 20365
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTLLMLLVALSLSLTASFAAAVEVNTADQAALESVKGLGPVKSKAIIDERTKNGPFKS CHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC ADDLANRVKGLGQKSVANLEAAGLTIGGSTAPPTGAQAAPAAGSRGPRTQAATGAPAPTA HHHHHHHHHHCCHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APTSTATTAPVATAAAPASAAGAARNGANNGANNAPTQSARGKRAAKQQDKAAAAGASAV CCCCCCCCCCHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHH STPVAAGPAPKAKNPRKAKKNQAASAATGASAS CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLKTLLMLLVALSLSLTASFAAAVEVNTADQAALESVKGLGPVKSKAIIDERTKNGPFKS CHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC ADDLANRVKGLGQKSVANLEAAGLTIGGSTAPPTGAQAAPAAGSRGPRTQAATGAPAPTA HHHHHHHHHHCCHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APTSTATTAPVATAAAPASAAGAARNGANNGANNAPTQSARGKRAAKQQDKAAAAGASAV CCCCCCCCCCHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHH STPVAAGPAPKAKNPRKAKKNQAASAATGASAS CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA