| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027035
Identifier: 238027035
GI number: 238027035
Start: 1555477
End: 1556073
Strand: Reverse
Name: 238027035
Synonym: bglu_1g14130
Alternate gene names: NA
Gene position: 1556073-1555477 (Counterclockwise)
Preceding gene: 238027043
Following gene: 238027034
Centisome position: 39.83
GC content: 71.19
Gene sequence:
>597_bases GTGGCGACGCGCGACGCAAATGCCGCCCGGGGGCGACGGAAAAGCTATAATTTAGCGGATTTTCACCCGCTTTCGCAATG CGCCACGCCGGCCAGCCGGCCGGCGGCGGCCCCGTCCGGGCCGGGCCCGCCCGGCCGCGGCTGCCGCCGCCGGGCACCCC GGCAGGCAGGCCGGGCGCCCGGCCGGAGCGGCCTTCCCGACACTGCGGACAACGATTTGAAACTACATCAGGACCCGAGC GACGCGCTCAATACCGTCACCGGCTACGGCCCCGATTATGTCGACATCAACCTGGCACGCCACGAACACAGCGTGATCGT GCTGCCGGGCGCCCCGGTGGCGCCATGGCCCGTGGCCTCGTTCGAGGCGCTCGCGCCCGAACATTTCACGATGCTGCTCG ATCCGGCCCCGGAAGTGGTGATCTTCGGCAGCGGCGCGAGGCTGCGCTTTCCGCACCCGCGCCTGACCGCCGCGCTGACG GCGCGCCGGATCGGCGTGGAGACGATGGACTTCCAGGCCGCCTGCCGCACCTACAACATCCTGATGGCCGAGGGCCGCAA GGTGGCTGCCGTGCTGCTGATCGAGCGCGCGGGCTGA
Upstream 100 bases:
>100_bases GCTAGGCCTGCGAAGCTGGAGGATGGGAGTCGAAACTGGAGAGCGGCCGGTCGGTGCGCGCTGTCTAGGAGACGGTCGGG AGCGAGGCCGGACGCGGCTT
Downstream 100 bases:
>100_bases GCGGCCCGCCCCGCCGCGCGAACCGTCGTCAAGCGAGCGAGGTCGCGCGATGCGTGACCAATCCGGCAACGCGGCCGCCC GCTGCCAATGATGGCTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MATRDANAARGRRKSYNLADFHPLSQCATPASRPAAAPSGPGPPGRGCRRRAPRQAGRAPGRSGLPDTADNDLKLHQDPS DALNTVTGYGPDYVDINLARHEHSVIVLPGAPVAPWPVASFEALAPEHFTMLLDPAPEVVIFGSGARLRFPHPRLTAALT ARRIGVETMDFQAACRTYNILMAEGRKVAAVLLIERAG
Sequences:
>Translated_198_residues MATRDANAARGRRKSYNLADFHPLSQCATPASRPAAAPSGPGPPGRGCRRRAPRQAGRAPGRSGLPDTADNDLKLHQDPS DALNTVTGYGPDYVDINLARHEHSVIVLPGAPVAPWPVASFEALAPEHFTMLLDPAPEVVIFGSGARLRFPHPRLTAALT ARRIGVETMDFQAACRTYNILMAEGRKVAAVLLIERAG >Mature_197_residues ATRDANAARGRRKSYNLADFHPLSQCATPASRPAAAPSGPGPPGRGCRRRAPRQAGRAPGRSGLPDTADNDLKLHQDPSD ALNTVTGYGPDYVDINLARHEHSVIVLPGAPVAPWPVASFEALAPEHFTMLLDPAPEVVIFGSGARLRFPHPRLTAALTA RRIGVETMDFQAACRTYNILMAEGRKVAAVLLIERAG
Specific function: Unknown
COG id: COG3737
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21143; Mature: 21012
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRDANAARGRRKSYNLADFHPLSQCATPASRPAAAPSGPGPPGRGCRRRAPRQAGRAP CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCC GRSGLPDTADNDLKLHQDPSDALNTVTGYGPDYVDINLARHEHSVIVLPGAPVAPWPVAS CCCCCCCCCCCCCEEECCCHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCC FEALAPEHFTMLLDPAPEVVIFGSGARLRFPHPRLTAALTARRIGVETMDFQAACRTYNI HHHCCCCCEEEEECCCCCEEEECCCCEEECCCCHHHHHHHHHHCCCCHHHHHHHHHEEEE LMAEGRKVAAVLLIERAG EEECCCEEEEEEEEEECC >Mature Secondary Structure ATRDANAARGRRKSYNLADFHPLSQCATPASRPAAAPSGPGPPGRGCRRRAPRQAGRAP CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCC GRSGLPDTADNDLKLHQDPSDALNTVTGYGPDYVDINLARHEHSVIVLPGAPVAPWPVAS CCCCCCCCCCCCCEEECCCHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCC FEALAPEHFTMLLDPAPEVVIFGSGARLRFPHPRLTAALTARRIGVETMDFQAACRTYNI HHHCCCCCEEEEECCCCCEEEECCCCEEECCCCHHHHHHHHHHCCCCHHHHHHHHHEEEE LMAEGRKVAAVLLIERAG EEECCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA