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The map label for this gene is arnA [H]

Identifier: 238027030

GI number: 238027030

Start: 1549909

End: 1550865

Strand: Reverse

Name: arnA [H]

Synonym: bglu_1g14080

Alternate gene names: 238027030

Gene position: 1550865-1549909 (Counterclockwise)

Preceding gene: 238027031

Following gene: 238027029

Centisome position: 39.7

GC content: 71.79

Gene sequence:

>957_bases
ATGAAACCGCGCGCGGTCGTGTTCGCCTATCACAACGTCGGCGTGCGCTGCCTGCAGGTGCTGCTCGCGCGCGGCGTGGA
GGTCGCGCTAGTCGTCACGCACGAGGACAGTCCGACCGAGAACATCTGGTTCGACAGCGTCGCCGCGGTGGCGCGCGAGC
ACGGCATCGCCGTGATCACGCCGGCCGATCCGGCCGGCGCCGAGTTGCGCGAGGCCGTCTCGGCCGCGCGGCCCGACTTC
ATCTTCTCGTTCTACTACCGGCACATGCTGCCGGTGTCGCTGCTGGCGCTGGCCGCGCGCGGCGCCTACAACCTGCACGG
CTCGCTGCTGCCGAAGTACCGCGGCCGGGTGCCGACCAACTGGGCGGTGCTCAACGGCGAGACCGAAACCGGCGCGACGC
TGCACGAGATGGCCGCGAAGCCCGACGCCGGCGCGATCGTGGGCCAGACCGCGGTGCCGATCCTGCCCGACGACACCGCC
GCGCAGGTGTTCGACAAGGTCACGGTGGCCGCCGAGCAGACGCTCTGGCGCGTGCTGCCCGCGTTGCTCGCGGGCGAGGC
CGCGCACCTGCCGAACGATCTCTCCCAGGGCAGCTACTTCGGCGGGCGCAAGCCCGAGGACGGCCGCATCGACTGGTCGA
AGCCGGCTGCCGAGGTCTACAACCTGATTCGCGCGGTCGCCCCGCCCTACCCGGGCGCCTTCACCGAGCTCGCCGGCACG
CGCTTCGTGGTCGCGCGCGCGCGCCTGGCCGCGCCCGGCTCGGCCGCCGCGCAGGCTGCACGGGATTTGCCCCCGGGCCT
GCAGGTGCGCGATAATGCGCTATTCGGCGTGTGCGGCGACAGCCGCGCCGTCACCGTCCTCGAGTTGCGCGAAGCGCGCA
ACGGCGGCCCGGATTCCGGCCCGGTCGTCTCTCCCGCTCAATTCGCGCAGTTCATTGATTCTTCCCGCCAGTCATGA

Upstream 100 bases:

>100_bases
CGCGGCCGCGCTACCTGATCCAGACCGTGCTCGAGGAGCGCCCCGAGCGCAGCCACCTGCCGCTGCCGGGCGGCGCCGGC
CATCGCGTGGAGGCCAGCCG

Downstream 100 bases:

>100_bases
AAGCAAAAAAAGTCCTGATCCTGGGTGTGAACGGCTTCATCGGCCATCACCTGTCCAAACGCATTCTTGAAACCACCGAT
TGGGAAGTATTCGGGATGGA

Product: putative formyltransferase

Products: NA

Alternate protein names: UDP-4-amino-4-deoxy-L-arabinose formyltransferase; ArnAFT; UDP-L-Ara4N formyltransferase; UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating; ArnADH; UDP-GlcUA decarboxylase; UDP-glucuronic acid dehydrogenase [H]

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKPRAVVFAYHNVGVRCLQVLLARGVEVALVVTHEDSPTENIWFDSVAAVAREHGIAVITPADPAGAELREAVSAARPDF
IFSFYYRHMLPVSLLALAARGAYNLHGSLLPKYRGRVPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTA
AQVFDKVTVAAEQTLWRVLPALLAGEAAHLPNDLSQGSYFGGRKPEDGRIDWSKPAAEVYNLIRAVAPPYPGAFTELAGT
RFVVARARLAAPGSAAAQAARDLPPGLQVRDNALFGVCGDSRAVTVLELREARNGGPDSGPVVSPAQFAQFIDSSRQS

Sequences:

>Translated_318_residues
MKPRAVVFAYHNVGVRCLQVLLARGVEVALVVTHEDSPTENIWFDSVAAVAREHGIAVITPADPAGAELREAVSAARPDF
IFSFYYRHMLPVSLLALAARGAYNLHGSLLPKYRGRVPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTA
AQVFDKVTVAAEQTLWRVLPALLAGEAAHLPNDLSQGSYFGGRKPEDGRIDWSKPAAEVYNLIRAVAPPYPGAFTELAGT
RFVVARARLAAPGSAAAQAARDLPPGLQVRDNALFGVCGDSRAVTVLELREARNGGPDSGPVVSPAQFAQFIDSSRQS
>Mature_318_residues
MKPRAVVFAYHNVGVRCLQVLLARGVEVALVVTHEDSPTENIWFDSVAAVAREHGIAVITPADPAGAELREAVSAARPDF
IFSFYYRHMLPVSLLALAARGAYNLHGSLLPKYRGRVPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTA
AQVFDKVTVAAEQTLWRVLPALLAGEAAHLPNDLSQGSYFGGRKPEDGRIDWSKPAAEVYNLIRAVAPPYPGAFTELAGT
RFVVARARLAAPGSAAAQAARDLPPGLQVRDNALFGVCGDSRAVTVLELREARNGGPDSGPVVSPAQFAQFIDSSRQS

Specific function: Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabin

COG id: COG0223

COG function: function code J; Methionyl-tRNA formyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the sugar epimerase family. UDP-glucuronic acid decarboxylase subfamily [H]

Homologues:

Organism=Homo sapiens, GI21614513, Length=170, Percent_Identity=25.2941176470588, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI238814322, Length=228, Percent_Identity=23.6842105263158, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1788589, Length=307, Percent_Identity=41.6938110749186, Blast_Score=233, Evalue=1e-62,
Organism=Escherichia coli, GI1789683, Length=259, Percent_Identity=30.5019305019305, Blast_Score=110, Evalue=9e-26,
Organism=Caenorhabditis elegans, GI133930964, Length=292, Percent_Identity=24.3150684931507, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24582400, Length=191, Percent_Identity=29.8429319371728, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021168
- InterPro:   IPR001509
- InterPro:   IPR005793
- InterPro:   IPR002376
- InterPro:   IPR011034
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase; PF02911 Formyl_trans_C; PF00551 Formyl_trans_N [H]

EC number: =2.1.2.13; =1.1.1.305 [H]

Molecular weight: Translated: 33777; Mature: 33777

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRAVVFAYHNVGVRCLQVLLARGVEVALVVTHEDSPTENIWFDSVAAVAREHGIAVIT
CCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEE
PADPAGAELREAVSAARPDFIFSFYYRHMLPVSLLALAARGAYNLHGSLLPKYRGRVPTN
CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCC
WAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLWRVLP
EEEECCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALLAGEAAHLPNDLSQGSYFGGRKPEDGRIDWSKPAAEVYNLIRAVAPPYPGAFTELAGT
HHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCC
RFVVARARLAAPGSAAAQAARDLPPGLQVRDNALFGVCGDSRAVTVLELREARNGGPDSG
CEEEHHHHHCCCCHHHHHHHHCCCCCCEEECCEEEEEECCCCCEEHEEEHHHCCCCCCCC
PVVSPAQFAQFIDSSRQS
CCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKPRAVVFAYHNVGVRCLQVLLARGVEVALVVTHEDSPTENIWFDSVAAVAREHGIAVIT
CCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEE
PADPAGAELREAVSAARPDFIFSFYYRHMLPVSLLALAARGAYNLHGSLLPKYRGRVPTN
CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCC
WAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLWRVLP
EEEECCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALLAGEAAHLPNDLSQGSYFGGRKPEDGRIDWSKPAAEVYNLIRAVAPPYPGAFTELAGT
HHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCC
RFVVARARLAAPGSAAAQAARDLPPGLQVRDNALFGVCGDSRAVTVLELREARNGGPDSG
CEEEHHHHHCCCCHHHHHHHHCCCCCCEEECCEEEEEECCCCCEEHEEEHHHCCCCCCCC
PVVSPAQFAQFIDSSRQS
CCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA