| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is psiF [C]
Identifier: 238027010
GI number: 238027010
Start: 1529898
End: 1530182
Strand: Reverse
Name: psiF [C]
Synonym: bglu_1g13880
Alternate gene names: 238027010
Gene position: 1530182-1529898 (Counterclockwise)
Preceding gene: 238027012
Following gene: 238027009
Centisome position: 39.17
GC content: 61.75
Gene sequence:
>285_bases ATGAAAATCCGATCGCTGATGGCCGTGCTGCTCGTCGGCGGCATGCTGGCGTCACCCGCGTTTGCCGCCAACAGCCAGCA GGACAAGATGAAGGCCTGCAACGCGCAGGCAGCCGGCAAGTCGGGCGACGAGCGCAAGGCCTTCATGAAGGACTGTCTGT CCGCGAAGCCGAAGATGTCCCAACAGGACAAGATGAAGGCATGCAATACGCAGGCCGCAGGCAAGAAGGGAGATGAGCGC AAGGCCTTCATGAAGGCTTGCCTGTCGAACCAGCCGGCGGCCTGA
Upstream 100 bases:
>100_bases GGTATTTTCGGGATGATTTGCCATAATGGCCTCGCGATCCGCGCAGCCGCGCGCGTCGTCCGGTGTCACGAGAACGCCAA TTACCCAACGGGAGTGTCCA
Downstream 100 bases:
>100_bases CGCTGCCCGCCCCATGCCTCGCCCCGCTCGCGGGCGCGGCAGTTTCACCGCGGCCCGGCCGCCCGCGCGCCGTCGCGCCG CCCCGGTTGCTGCCCTTGCC
Product: phosphate starvation-inducible protein PsiF
Products: NA
Alternate protein names: Phosphate Starvation-Inducible Protein PsiF; PsiF Repeat-Containing Protein; PsiF Repeat Protein; Protein Induced By Phosphate Starvation; Phosphate Starvation Inducible PsiF; Psif Repeat Protein
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MKIRSLMAVLLVGGMLASPAFAANSQQDKMKACNAQAAGKSGDERKAFMKDCLSAKPKMSQQDKMKACNTQAAGKKGDER KAFMKACLSNQPAA
Sequences:
>Translated_94_residues MKIRSLMAVLLVGGMLASPAFAANSQQDKMKACNAQAAGKSGDERKAFMKDCLSAKPKMSQQDKMKACNTQAAGKKGDER KAFMKACLSNQPAA >Mature_94_residues MKIRSLMAVLLVGGMLASPAFAANSQQDKMKACNAQAAGKSGDERKAFMKDCLSAKPKMSQQDKMKACNTQAAGKKGDER KAFMKACLSNQPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081731, Length=103, Percent_Identity=40.7766990291262, Blast_Score=62, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9986; Mature: 9986
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 8.5 %Met (Translated Protein) 12.8 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 8.5 %Met (Mature Protein) 12.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRSLMAVLLVGGMLASPAFAANSQQDKMKACNAQAAGKSGDERKAFMKDCLSAKPKMS CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCC QQDKMKACNTQAAGKKGDERKAFMKACLSNQPAA HHHHHHHHCCHHCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKIRSLMAVLLVGGMLASPAFAANSQQDKMKACNAQAAGKSGDERKAFMKDCLSAKPKMS CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCC QQDKMKACNTQAAGKKGDERKAFMKACLSNQPAA HHHHHHHHCCHHCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA