| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yceG [C]
Identifier: 238027000
GI number: 238027000
Start: 1520120
End: 1521136
Strand: Direct
Name: yceG [C]
Synonym: bglu_1g13780
Alternate gene names: 238027000
Gene position: 1520120-1521136 (Clockwise)
Preceding gene: 238026997
Following gene: 238027001
Centisome position: 38.91
GC content: 68.44
Gene sequence:
>1017_bases ATGTCCCTACTCTCGAAATGCGCCGCGCTTGCGGCGGCGGCCGTCGTTCTGGCCGCTGCGCTTGCGGGCGGCGCCTATTA CTGGTCGACCCGGCCGCTCGTCCTCGCCTCGCCGACCCTCGACGTCACCATCAAGCCCCACAGCAGCGTCAGGAGCGTCG CCCGGCAACTGGTGCGCGGCGGCGTGCCGTTGCAGCCGGTGCTGTTCGAGGCGATCACGCGCGCGCTCGGCCTGTCGGCG CGGCTCAAGTCCGGCAACTATGAGTTCCGCTCCGGCGTGACGGCCTACGAGGTGCTGCAGAAGCTCGCGCGCGGCGACGT CAACGAATACGTCGTCACGGTCATCGAAGGCTGGACCTTCAAGCGCATGCGCGCCGAACTCGATGCCAGCCCGGCCCTCG TCCACGACAGCGCTCACCTGAGCGACGCCGAACTGCTGCGCGCAATCGGCGCGCCGGCGGCGGCCGTGGCGCGCGGCAGC GGCGAGGGGCTGTTTTTCCCCGACACCTACCTGTTCGACAAGGGAACCAGCGATCTGAACGTCTACCGCCGCGCCTACCG CCTCATGCAGGAGCGCGTCGACGAGGCGTGGAGCATGCGCGCGCCGGGGCTGCCGTACCGCACGCCTTACGAAATGTTGA CGGTGGCCTCGCTGATCGAGAAGGAAACCGGCCATGCGGCCGATCGCGCCTACGTCTCGGCCGTGTTCGCGAACCGGCTG CGCATCGGCATGCCGCTGCAGACCGACCCGTCGGTGATCTACGGCCTGGGCGACGCCTACGACGGACACCTGCGCAGGCG GGATTTGCAGATGGACACTCCTTACAATACCTACACGCGCCGTGGCCTGCCGCCGACGCCGATCGCCCTGCCGGGCGTGG CGTCGCTGCAGGCCGCCGTGAACCCCGCCCCGACCGCGGCACTCTACTTCGTGGCCAAGGGCGACGGAACCAGCGTGTTC TCGGACACGCTGGGGGATCACAACAAGGCCGTGGACAAATACATTCGAGGTCAATGA
Upstream 100 bases:
>100_bases CCGTTGGCAATCGGTGAGTTCATGGAGCTGGGAACAGTCAATTCTGACTTTGGCGAAGACAAGCAAGTATTATATTGATC TTGTCCCGGTCTCGTTCCGC
Downstream 100 bases:
>100_bases TGGCGCGTGGAAAATTCATCACGTTCGAAGGGATCGACGGCGCGGGCAAGACCACGCACCTCGCCTGGTTCTGCGAACAC CTGCGCGCGAAGATCGCGCC
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MSLLSKCAALAAAAVVLAAALAGGAYYWSTRPLVLASPTLDVTIKPHSSVRSVARQLVRGGVPLQPVLFEAITRALGLSA RLKSGNYEFRSGVTAYEVLQKLARGDVNEYVVTVIEGWTFKRMRAELDASPALVHDSAHLSDAELLRAIGAPAAAVARGS GEGLFFPDTYLFDKGTSDLNVYRRAYRLMQERVDEAWSMRAPGLPYRTPYEMLTVASLIEKETGHAADRAYVSAVFANRL RIGMPLQTDPSVIYGLGDAYDGHLRRRDLQMDTPYNTYTRRGLPPTPIALPGVASLQAAVNPAPTAALYFVAKGDGTSVF SDTLGDHNKAVDKYIRGQ
Sequences:
>Translated_338_residues MSLLSKCAALAAAAVVLAAALAGGAYYWSTRPLVLASPTLDVTIKPHSSVRSVARQLVRGGVPLQPVLFEAITRALGLSA RLKSGNYEFRSGVTAYEVLQKLARGDVNEYVVTVIEGWTFKRMRAELDASPALVHDSAHLSDAELLRAIGAPAAAVARGS GEGLFFPDTYLFDKGTSDLNVYRRAYRLMQERVDEAWSMRAPGLPYRTPYEMLTVASLIEKETGHAADRAYVSAVFANRL RIGMPLQTDPSVIYGLGDAYDGHLRRRDLQMDTPYNTYTRRGLPPTPIALPGVASLQAAVNPAPTAALYFVAKGDGTSVF SDTLGDHNKAVDKYIRGQ >Mature_337_residues SLLSKCAALAAAAVVLAAALAGGAYYWSTRPLVLASPTLDVTIKPHSSVRSVARQLVRGGVPLQPVLFEAITRALGLSAR LKSGNYEFRSGVTAYEVLQKLARGDVNEYVVTVIEGWTFKRMRAELDASPALVHDSAHLSDAELLRAIGAPAAAVARGSG EGLFFPDTYLFDKGTSDLNVYRRAYRLMQERVDEAWSMRAPGLPYRTPYEMLTVASLIEKETGHAADRAYVSAVFANRLR IGMPLQTDPSVIYGLGDAYDGHLRRRDLQMDTPYNTYTRRGLPPTPIALPGVASLQAAVNPAPTAALYFVAKGDGTSVFS DTLGDHNKAVDKYIRGQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=321, Percent_Identity=39.2523364485981, Blast_Score=218, Evalue=6e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 36577; Mature: 36446
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLSKCAALAAAAVVLAAALAGGAYYWSTRPLVLASPTLDVTIKPHSSVRSVARQLVRG CCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEECCCEEEEECCCHHHHHHHHHHHHC GVPLQPVLFEAITRALGLSARLKSGNYEFRSGVTAYEVLQKLARGDVNEYVVTVIEGWTF CCCCHHHHHHHHHHHHCCHHHCCCCCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCHH KRMRAELDASPALVHDSAHLSDAELLRAIGAPAAAVARGSGEGLFFPDTYLFDKGTSDLN HHHHHHCCCCCCEEECCCCCCHHHHHHHHCCCHHHHHCCCCCCEECCCHHEECCCCCHHH VYRRAYRLMQERVDEAWSMRAPGLPYRTPYEMLTVASLIEKETGHAADRAYVSAVFANRL HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RIGMPLQTDPSVIYGLGDAYDGHLRRRDLQMDTPYNTYTRRGLPPTPIALPGVASLQAAV HCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHC NPAPTAALYFVAKGDGTSVFSDTLGDHNKAVDKYIRGQ CCCCCEEEEEEECCCCCHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure SLLSKCAALAAAAVVLAAALAGGAYYWSTRPLVLASPTLDVTIKPHSSVRSVARQLVRG CHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEECCCEEEEECCCHHHHHHHHHHHHC GVPLQPVLFEAITRALGLSARLKSGNYEFRSGVTAYEVLQKLARGDVNEYVVTVIEGWTF CCCCHHHHHHHHHHHHCCHHHCCCCCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCHH KRMRAELDASPALVHDSAHLSDAELLRAIGAPAAAVARGSGEGLFFPDTYLFDKGTSDLN HHHHHHCCCCCCEEECCCCCCHHHHHHHHCCCHHHHHCCCCCCEECCCHHEECCCCCHHH VYRRAYRLMQERVDEAWSMRAPGLPYRTPYEMLTVASLIEKETGHAADRAYVSAVFANRL HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RIGMPLQTDPSVIYGLGDAYDGHLRRRDLQMDTPYNTYTRRGLPPTPIALPGVASLQAAV HCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHC NPAPTAALYFVAKGDGTSVFSDTLGDHNKAVDKYIRGQ CCCCCEEEEEEECCCCCHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]