| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is argE [H]
Identifier: 238026955
GI number: 238026955
Start: 1456144
End: 1457361
Strand: Reverse
Name: argE [H]
Synonym: bglu_1g13300
Alternate gene names: 238026955
Gene position: 1457361-1456144 (Counterclockwise)
Preceding gene: 238026956
Following gene: 238026954
Centisome position: 37.31
GC content: 69.7
Gene sequence:
>1218_bases ATGCCGCCCGTCGACGCCGCCGCGCCGTCCGCCCACGCCCTTCCCGCCGTCGAATCGCCGGTCAGCCTGCGCTGGGTCAG TGAGCTCGTCGCGATGGACACCACCAGCCGCGTGCCGAACCTGGGTCTCATCGAGACCGTGCGCGACGCGCTCGCCGCGC GCGGCATCGAATCGACGCTGACGCACGACCAGCGCGGCGGCTGGGCCAACCTGTTCGCGACGATTCCCGCGCACGACGGC ACCACCGACGGCGGCGTGGTGCTGTCCGGGCACACCGACGTGGTGCCGGTGGACGGCCAGCAGTGGGACAGCGACCCGTT CACGCCGGCCATCCACGATGGCCGGCTCTATGGGCGCGGCACCTGCGACATGAAGGGCTTCATCGGCGCGGCGCTCGCAT TGGTGCCGGAAATGCAGGCGGCGAAGCTGGCCCGGCCGATCCATCTCGCGCTGTCCTACGACGAGGAAATCGGCTGCGCG GGCGCGCCGCTGATGCTCGCCGAACTCAAGCGCCGCGGCCTGCAGCCGGGCGGCTGCATCGTCGGCGAGCCCACCGGCAT GCGCCCGATCATCGCTCACAAGGGCATCAACACCTACCGCTGCTGCGTGCGCGGCCACGCCGCCCACTCGTCGCTGACGC CGAAGGGGCTCAATGCGATCGAATACGCGGCGCGGCTGATCTGCCATATCCGCGACATCGCCGACGAATTCCGCGCCAAC GGGCCGTTCGACGAGCTCTACGACGTACCGTTCAGCACCGCGCAGACGAGCCAGATCGAAGGCGGCAATGCGATCAACAC GGTGCCGGCCGAGTGCCGCTTCTCGTTCGAATTCCGCAACCTGCCGACGCTCGATCCCGACGCGATCTTCGCGCGCATCG ACGCCTATGCGCGCGACACGCTGCTGCCCAGGATGCGCCGCGAGCATCCGGACGCGGCCATCGAAATCACGAAGATCGCC GCGGCGCCGGGCCTCGATGCCGACGAGCAGGCCGCGATCACCGAACTGGTGCGCGCGCTGACGGCCGACCGCGCGCAGCG CAAGGTCGCCTACGGCACCGAGGCCGGGCTGTTCGCGAACGCGGGCATTCCGAGCGTGGTGTGCGGGCCGGGCGACATCG AGCAGGCACACAAGGCCAACGAGTACGTCGAGCTCGCGCAGCTCGATGCCTGCGAGCGCTTTCTGCGCAAGTTCATCTAC AGCATGACGCTCGCCTGA
Upstream 100 bases:
>100_bases CGCCTTGCGGCGCCGGCCTTGCTGCACCGCAAGGCGCGGCGCGAGCGCGGGCCGCCGCGTTTTTGAGTATGATTTTCGTA TCGCCATCCGGAGTTTCACC
Downstream 100 bases:
>100_bases TGCCATCCGGACCGGTTCGCCTGTCCGGCGAGCCCCCGCTCTCCGCCATGTCGACCCTGTCACCGCCCCCTGCCCATCCG TCCATCAACGGCGAGCCGAT
Product: acetylornithine deacetylase
Products: NA
Alternate protein names: AO; Acetylornithinase; N-acetylornithinase; NAO [H]
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MPPVDAAAPSAHALPAVESPVSLRWVSELVAMDTTSRVPNLGLIETVRDALAARGIESTLTHDQRGGWANLFATIPAHDG TTDGGVVLSGHTDVVPVDGQQWDSDPFTPAIHDGRLYGRGTCDMKGFIGAALALVPEMQAAKLARPIHLALSYDEEIGCA GAPLMLAELKRRGLQPGGCIVGEPTGMRPIIAHKGINTYRCCVRGHAAHSSLTPKGLNAIEYAARLICHIRDIADEFRAN GPFDELYDVPFSTAQTSQIEGGNAINTVPAECRFSFEFRNLPTLDPDAIFARIDAYARDTLLPRMRREHPDAAIEITKIA AAPGLDADEQAAITELVRALTADRAQRKVAYGTEAGLFANAGIPSVVCGPGDIEQAHKANEYVELAQLDACERFLRKFIY SMTLA
Sequences:
>Translated_405_residues MPPVDAAAPSAHALPAVESPVSLRWVSELVAMDTTSRVPNLGLIETVRDALAARGIESTLTHDQRGGWANLFATIPAHDG TTDGGVVLSGHTDVVPVDGQQWDSDPFTPAIHDGRLYGRGTCDMKGFIGAALALVPEMQAAKLARPIHLALSYDEEIGCA GAPLMLAELKRRGLQPGGCIVGEPTGMRPIIAHKGINTYRCCVRGHAAHSSLTPKGLNAIEYAARLICHIRDIADEFRAN GPFDELYDVPFSTAQTSQIEGGNAINTVPAECRFSFEFRNLPTLDPDAIFARIDAYARDTLLPRMRREHPDAAIEITKIA AAPGLDADEQAAITELVRALTADRAQRKVAYGTEAGLFANAGIPSVVCGPGDIEQAHKANEYVELAQLDACERFLRKFIY SMTLA >Mature_404_residues PPVDAAAPSAHALPAVESPVSLRWVSELVAMDTTSRVPNLGLIETVRDALAARGIESTLTHDQRGGWANLFATIPAHDGT TDGGVVLSGHTDVVPVDGQQWDSDPFTPAIHDGRLYGRGTCDMKGFIGAALALVPEMQAAKLARPIHLALSYDEEIGCAG APLMLAELKRRGLQPGGCIVGEPTGMRPIIAHKGINTYRCCVRGHAAHSSLTPKGLNAIEYAARLICHIRDIADEFRANG PFDELYDVPFSTAQTSQIEGGNAINTVPAECRFSFEFRNLPTLDPDAIFARIDAYARDTLLPRMRREHPDAAIEITKIAA APGLDADEQAAITELVRALTADRAQRKVAYGTEAGLFANAGIPSVVCGPGDIEQAHKANEYVELAQLDACERFLRKFIYS MTLA
Specific function: Displays A Broad Specificity And Can Also Deacylate Substrates Such As Acetylarginine, Acetylhistidine Or Acetylglutamate Semialdehyde. [C]
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family. ArgE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790395, Length=333, Percent_Identity=32.7327327327327, Blast_Score=171, Evalue=6e-44, Organism=Escherichia coli, GI1788816, Length=335, Percent_Identity=28.0597014925373, Blast_Score=83, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010169 - InterPro: IPR001261 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.16 [H]
Molecular weight: Translated: 43468; Mature: 43337
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPVDAAAPSAHALPAVESPVSLRWVSELVAMDTTSRVPNLGLIETVRDALAARGIESTL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHCCHHHHH THDQRGGWANLFATIPAHDGTTDGGVVLSGHTDVVPVDGQQWDSDPFTPAIHDGRLYGRG CCCCCCCEEEEEEEECCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCEEECCC TCDMKGFIGAALALVPEMQAAKLARPIHLALSYDEEIGCAGAPLMLAELKRRGLQPGGCI CCCHHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEE VGEPTGMRPIIAHKGINTYRCCVRGHAAHSSLTPKGLNAIEYAARLICHIRDIADEFRAN EECCCCCCCCHHHCCCCHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC GPFDELYDVPFSTAQTSQIEGGNAINTVPAECRFSFEFRNLPTLDPDAIFARIDAYARDT CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH LLPRMRREHPDAAIEITKIAAAPGLDADEQAAITELVRALTADRAQRKVAYGTEAGLFAN HHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC AGIPSVVCGPGDIEQAHKANEYVELAQLDACERFLRKFIYSMTLA CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PPVDAAAPSAHALPAVESPVSLRWVSELVAMDTTSRVPNLGLIETVRDALAARGIESTL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHCCHHHHH THDQRGGWANLFATIPAHDGTTDGGVVLSGHTDVVPVDGQQWDSDPFTPAIHDGRLYGRG CCCCCCCEEEEEEEECCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCEEECCC TCDMKGFIGAALALVPEMQAAKLARPIHLALSYDEEIGCAGAPLMLAELKRRGLQPGGCI CCCHHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEE VGEPTGMRPIIAHKGINTYRCCVRGHAAHSSLTPKGLNAIEYAARLICHIRDIADEFRAN EECCCCCCCCHHHCCCCHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC GPFDELYDVPFSTAQTSQIEGGNAINTVPAECRFSFEFRNLPTLDPDAIFARIDAYARDT CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH LLPRMRREHPDAAIEITKIAAAPGLDADEQAAITELVRALTADRAQRKVAYGTEAGLFAN HHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC AGIPSVVCGPGDIEQAHKANEYVELAQLDACERFLRKFIYSMTLA CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9829957 [H]