Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is ppsA [H]

Identifier: 238026920

GI number: 238026920

Start: 1412629

End: 1415031

Strand: Direct

Name: ppsA [H]

Synonym: bglu_1g12900

Alternate gene names: 238026920

Gene position: 1412629-1415031 (Clockwise)

Preceding gene: 238026918

Following gene: 238026921

Centisome position: 36.16

GC content: 65.58

Gene sequence:

>2403_bases
ATGACTAACGCAGCAAACGTCGCAAAGGACCAGGCGTATGTAATCCCGTTCGAGCAGTTGCGGATGACCGATGTCGAGAT
CGTGGGGGGCAAGAACGCTTCCCTCGGCGAGATGATCAGCCAGCTTTCCGAGGCAGGCGTGCGCGTTCCCACCGGGTTCG
CCACGACGGCGCTCGCGTTCCGCGACTTCCTCGCCCATAACGATCTCACCGACCGCATCGCGAAACGCCTCGAGTCGCTC
GATGTCGACGACGTGAAGTCGCTCGCCGTGGCGGGTGCCGAGATTCGCAAGTGGATCGTCGAGGCGCCGCTGCAGCCGCG
GCTCGATGCCGAAATCCGCGAACAGTTCGAGGTGCTCTGCCAGAGCTCGCCCGAGGAGTTGTCGTTCGCGGTGCGTTCGT
CGGCCACCGCCGAGGATCTGCCCGACGCGTCGTTCGCCGGCCAGCAGGAGTCCTACCTCAACGTGGTCGGCATCGACGAC
GTGCTCGACCGCATGAAGCACGTGTTCGCGTCGCTCTATAACGACCGCGCGATTTCGTACCGCGTCCACAAGGGCTTCAC
GCACGCCGAGGTCGCGCTGTCGGCCGGCGTGCAGCGCATGGTGCGCTCCGACGTCGGCGCGGCCGGCGTGATGTTTACGA
TCGACACCGAATCGGGCTTCAAGGACGCCGTGTTCGTGACGTCGAGCTACGGCCTGGGCGAGACGGTGGTGCAGGGCGCC
GTGAACCCCGACGAGTTCTACGTGTTCAAGACCACGCTCGCCCGGGACAAGCACCCGATCATCCGCCGCTCGATCGGCTC
GAAGCTGATCAAGATGGAGTTCACGCAGCCGGGCGAGCCGGGCCGTGTGAAGACGGTCGACGTCGCACACGAGCAGCGCA
ATCGCTACTCGATCACCGACGCCGACGTGATCGAGCTGGCCAAGTACGCCGTCATCATCGAGAAGCACTACCAGCGTCCG
ATGGACATCGAGTGGGGCAAGGACGGCCGCGACGGCAAGATCTTCATCCTCCAGGCGCGCCCGGAAACCGTGAAGAGCCA
GGCCAACGGCAAGGTCGAGCAGCGCTTCAAGCTGAAGGGCCAGTCGCAGGTGCTCGCCACCGGCCGCGCGATCGGCCAGA
AGATCGGCGCCGGCCCGGTGCGCGTGATCCAGGACCCGTCGGAAATGGAGCGTGTGCAGCCCGGCGACGTGCTGGTGGCC
GACATGACCGACCCGAACTGGGAGCCGGTGATGAAGCGCGCCTCGGCGATCGTCACGAACCGCGGCGGGCGCACCTGCCA
CGCGGCGATCATCGCGCGCGAGTTGGGCGTGCCGGCGGTGGTCGGCTGCGGCGACGCGACCGACGTGCTGAAGGACGGGG
CGCTCGTCACCGTGTCGTGCGCGGAGGGCGACGAAGGCAAGATCTACGACGGCCTGCTCGAGACCGAGGTGACGGAAGTC
CAGCGCGGCGACCTGCCGGCCATCCCGGTCAAGATCATGATGAACGTCGGCAACCCGCAGCTCGCGTTCGACTTCTCGCA
GTTGCCGAACGGCGGTGTCGGCCTGGCGCGGCTCGAGTTCATCATCAACAACAACATCGGCGTCCATCCGAAGGCGATCC
TCGAGTATCCGAACATCGATTCGGACCTGAAGAAGGCGGTCGAGAGCGTCGCACGCGGTCATGCCTCGCCGCGCGCGTTC
TACGTGGACAAGCTGACCGAAGGCATCGCCACGATCGGCGCGGCGTTCTATCCGAAGCCCGTGATCGTGCGCCTGTCCGA
TTTCAAGTCGAACGAGTACAAGAAGCTGATCGGCGGCTCGCGCTACGAGCCGGACGAGGAAAATCCGATGCTCGGCTTCC
GCGGCGCGTCGCGCTACATCGCCGACGACTTCGCGCAGGCCTTCGAGATGGAGTGCATGGCACTGAAGCGCGTGCGCGAC
GAGATGGGCCTCACCAACGTCGAGATCATGGTGCCGTTCGTGCGTACCGTGAAGCAGGCCGAGCGCGTGGTGGGCCTGCT
CGCGAAGTACGGCCTCAAGCGCGGCGAGAACGGCCTGCGCCTGATCATGATGTGCGAGGTGCCGTCCAACGCGATCCTGG
CCGAGCAGTTCCTCGCGTATTTCGACGGCTTCTCGATCGGCTCGAACGACCTGACGCAGCTCACCCTCGGCCTCGACCGC
GACTCGGGCATGGAACTGCTCGCCGTCGATTTCGACGAGCGCGATCCGGCCGTGAAGTTCATGCTCAAGCGCGCGATCGA
CACCTGCCGGCGCCTCGGCAAGTACGTCGGCATCTGCGGCCAGGGCCCGTCCGATCATCCGGACTTCGCGCAGTGGCTGA
CCGAGGAGGGCATCGAGTCGATCTCGCTGAACCCCGATACGGTCATCGAGACCTGGCAGGCGCTCGCGAAGACGCAGAAG
TAA

Upstream 100 bases:

>100_bases
TATCCAACAGGTCGCGCGATGCACGCCCCGCCTTTTGCAAGCGGCCGTGCGTCAAGCCCAATCGCGCGATCGTGAATTTT
TTTCACACTTAGGGGCTTGT

Downstream 100 bases:

>100_bases
GCGGGCCTGCCCCGGCGGCTGCGCGAGACCGGCTGCGGCGAGCGGCGTTTTGCCGTTACGTGCGGTTGCCGGCCGCCGGC
GCCCCGATTCGTGCACGACA

Product: phosphoenolpyruvate synthase

Products: NA

Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]

Number of amino acids: Translated: 800; Mature: 799

Protein sequence:

>800_residues
MTNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLSEAGVRVPTGFATTALAFRDFLAHNDLTDRIAKRLESL
DVDDVKSLAVAGAEIRKWIVEAPLQPRLDAEIREQFEVLCQSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIDD
VLDRMKHVFASLYNDRAISYRVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFVTSSYGLGETVVQGA
VNPDEFYVFKTTLARDKHPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVAHEQRNRYSITDADVIELAKYAVIIEKHYQRP
MDIEWGKDGRDGKIFILQARPETVKSQANGKVEQRFKLKGQSQVLATGRAIGQKIGAGPVRVIQDPSEMERVQPGDVLVA
DMTDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCAEGDEGKIYDGLLETEVTEV
QRGDLPAIPVKIMMNVGNPQLAFDFSQLPNGGVGLARLEFIINNNIGVHPKAILEYPNIDSDLKKAVESVARGHASPRAF
YVDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIADDFAQAFEMECMALKRVRD
EMGLTNVEIMVPFVRTVKQAERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEQFLAYFDGFSIGSNDLTQLTLGLDR
DSGMELLAVDFDERDPAVKFMLKRAIDTCRRLGKYVGICGQGPSDHPDFAQWLTEEGIESISLNPDTVIETWQALAKTQK

Sequences:

>Translated_800_residues
MTNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLSEAGVRVPTGFATTALAFRDFLAHNDLTDRIAKRLESL
DVDDVKSLAVAGAEIRKWIVEAPLQPRLDAEIREQFEVLCQSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIDD
VLDRMKHVFASLYNDRAISYRVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFVTSSYGLGETVVQGA
VNPDEFYVFKTTLARDKHPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVAHEQRNRYSITDADVIELAKYAVIIEKHYQRP
MDIEWGKDGRDGKIFILQARPETVKSQANGKVEQRFKLKGQSQVLATGRAIGQKIGAGPVRVIQDPSEMERVQPGDVLVA
DMTDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCAEGDEGKIYDGLLETEVTEV
QRGDLPAIPVKIMMNVGNPQLAFDFSQLPNGGVGLARLEFIINNNIGVHPKAILEYPNIDSDLKKAVESVARGHASPRAF
YVDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIADDFAQAFEMECMALKRVRD
EMGLTNVEIMVPFVRTVKQAERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEQFLAYFDGFSIGSNDLTQLTLGLDR
DSGMELLAVDFDERDPAVKFMLKRAIDTCRRLGKYVGICGQGPSDHPDFAQWLTEEGIESISLNPDTVIETWQALAKTQK
>Mature_799_residues
TNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLSEAGVRVPTGFATTALAFRDFLAHNDLTDRIAKRLESLD
VDDVKSLAVAGAEIRKWIVEAPLQPRLDAEIREQFEVLCQSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIDDV
LDRMKHVFASLYNDRAISYRVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFVTSSYGLGETVVQGAV
NPDEFYVFKTTLARDKHPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVAHEQRNRYSITDADVIELAKYAVIIEKHYQRPM
DIEWGKDGRDGKIFILQARPETVKSQANGKVEQRFKLKGQSQVLATGRAIGQKIGAGPVRVIQDPSEMERVQPGDVLVAD
MTDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCAEGDEGKIYDGLLETEVTEVQ
RGDLPAIPVKIMMNVGNPQLAFDFSQLPNGGVGLARLEFIINNNIGVHPKAILEYPNIDSDLKKAVESVARGHASPRAFY
VDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIADDFAQAFEMECMALKRVRDE
MGLTNVEIMVPFVRTVKQAERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEQFLAYFDGFSIGSNDLTQLTLGLDRD
SGMELLAVDFDERDPAVKFMLKRAIDTCRRLGKYVGICGQGPSDHPDFAQWLTEEGIESISLNPDTVIETWQALAKTQK

Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]

COG id: COG0574

COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PEP-utilizing enzyme family [H]

Homologues:

Organism=Escherichia coli, GI1787994, Length=788, Percent_Identity=65.6091370558376, Blast_Score=1058, Evalue=0.0,
Organism=Escherichia coli, GI1788756, Length=399, Percent_Identity=25.8145363408521, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI1788726, Length=192, Percent_Identity=32.8125, Blast_Score=90, Evalue=6e-19,
Organism=Escherichia coli, GI48994992, Length=408, Percent_Identity=25.7352941176471, Blast_Score=84, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17564524, Length=237, Percent_Identity=30.8016877637131, Blast_Score=96, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR008279
- InterPro:   IPR006319
- InterPro:   IPR018274
- InterPro:   IPR023151
- InterPro:   IPR000121
- InterPro:   IPR002192
- InterPro:   IPR015813 [H]

Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]

EC number: =2.7.9.2 [H]

Molecular weight: Translated: 87882; Mature: 87751

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLSEAGVRVPTGFATTALAF
CCCCCCCCCCCEEEEEHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
RDFLAHNDLTDRIAKRLESLDVDDVKSLAVAGAEIRKWIVEAPLQPRLDAEIREQFEVLC
HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
QSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIDDVLDRMKHVFASLYNDRAISY
CCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEE
RVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFVTSSYGLGETVVQGA
EECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHCC
VNPDEFYVFKTTLARDKHPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVAHEQRNRYSITD
CCCCCEEEEEEHHCCCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEECHHHCCCCCCCCC
ADVIELAKYAVIIEKHYQRPMDIEWGKDGRDGKIFILQARPETVKSQANGKVEQRFKLKG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCHHHHHHCCC
QSQVLATGRAIGQKIGAGPVRVIQDPSEMERVQPGDVLVADMTDPNWEPVMKRASAIVTN
CCHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCC
RGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCAEGDEGKIYDGLLETEVTEV
CCCCCHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHH
QRGDLPAIPVKIMMNVGNPQLAFDFSQLPNGGVGLARLEFIINNNIGVHPKAILEYPNID
HCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCCCEEEEEEECCCCCCCCHHEEECCCCC
SDLKKAVESVARGHASPRAFYVDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGS
HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCC
RYEPDEENPMLGFRGASRYIADDFAQAFEMECMALKRVRDEMGLTNVEIMVPFVRTVKQA
CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH
ERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEQFLAYFDGFSIGSNDLTQLTLGLDR
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCC
DSGMELLAVDFDERDPAVKFMLKRAIDTCRRLGKYVGICGQGPSDHPDFAQWLTEEGIES
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCE
ISLNPDTVIETWQALAKTQK
ECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLSEAGVRVPTGFATTALAF
CCCCCCCCCCEEEEEHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
RDFLAHNDLTDRIAKRLESLDVDDVKSLAVAGAEIRKWIVEAPLQPRLDAEIREQFEVLC
HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
QSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIDDVLDRMKHVFASLYNDRAISY
CCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEE
RVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFVTSSYGLGETVVQGA
EECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHCC
VNPDEFYVFKTTLARDKHPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVAHEQRNRYSITD
CCCCCEEEEEEHHCCCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEECHHHCCCCCCCCC
ADVIELAKYAVIIEKHYQRPMDIEWGKDGRDGKIFILQARPETVKSQANGKVEQRFKLKG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCHHHHHHCCC
QSQVLATGRAIGQKIGAGPVRVIQDPSEMERVQPGDVLVADMTDPNWEPVMKRASAIVTN
CCHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCC
RGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCAEGDEGKIYDGLLETEVTEV
CCCCCHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHH
QRGDLPAIPVKIMMNVGNPQLAFDFSQLPNGGVGLARLEFIINNNIGVHPKAILEYPNID
HCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCCCEEEEEEECCCCCCCCHHEEECCCCC
SDLKKAVESVARGHASPRAFYVDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGS
HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCC
RYEPDEENPMLGFRGASRYIADDFAQAFEMECMALKRVRDEMGLTNVEIMVPFVRTVKQA
CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH
ERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEQFLAYFDGFSIGSNDLTQLTLGLDR
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCC
DSGMELLAVDFDERDPAVKFMLKRAIDTCRRLGKYVGICGQGPSDHPDFAQWLTEEGIES
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCE
ISLNPDTVIETWQALAKTQK
ECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]