| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is glnD [H]
Identifier: 238026900
GI number: 238026900
Start: 1391553
End: 1394129
Strand: Reverse
Name: glnD [H]
Synonym: bglu_1g12700
Alternate gene names: 238026900
Gene position: 1394129-1391553 (Counterclockwise)
Preceding gene: 238026901
Following gene: 238026899
Centisome position: 35.69
GC content: 69.85
Gene sequence:
>2577_bases ATGAGCGTCCCCGCCGTCTCCGCCGCCGCAGCGCCCGCGCGCAAGGCCGAATTCCGCGCCGTCAAGGCCGAGCTGATCAC GCGCTTTCGCGCCGCGACCCGCGTCGAGGCGCTGATGCGCGCGCTGTCACGCGCCACCGACGACGCGCTGCGGCAGATCT GGGACCAGTGCGAGTTGCCCGGCTCGCTCGCGCTGGTCGCCGTCGGCGGCTTCGGGCGCGGCGAGCTGGCGCCGCATTCG GACGTCGACATCCTGGTGCTGCTGCCCGATGCCCACGACGGCGAGTTCGACGCGCGCATCGAGCGCTTCATCGGCCTGGC CTGGGATCTCGGTCTCGAGATCGGCAGCAGCGTGCGCACCGTCGACGAATGCATCGCCGAGTCCGCGCGGGACGTGACGG TACAGACCTCGCTGCTCGAGGCGCGCCGCGTGACCGGCAGCGTGACGCTGTTCCGGCGCGCCGTGGCCCGCTACCGCGAG GCGCTCGATCCGCACGCGTTCTTCCAGGCCAAGGTGCTCGAACTGCGCCAGCGCCAGGCCAAGTTCCAGGACACGCCGTA CAGCCTCGAGCCGAACGTGAAGGAAAGCCCGGGCGGGCTGCGCGACCTGCAGACGATCCTCTGGATCGCGCGCGCCGCCG ATTTCGGCAACAGCTGGCGCGAGCTCCACACGCGCGGGCTGATCACCGCGCGCGAGGCACGCGAGCTGCGCCGCAACGAG AGCTTCCTGAAGGCGCTGCGCGCGCGGCTGCACGTGATCACGGGGCGCCGTCAGGACATCCTCGTGTTCGACCTGCAAAC CCAGGCGGCCGAGAGCTTCGGCTATCTGCCGACGCCGGCCAAGCGCGCCAGCGAACAGCTGATGCGCCGCTACTACTGGG CCGCGAAGGCGGTCACGCAGCTCGCGACGATCCTGATCCAGAACATCGAGGCGCAGCTGTTCCCGGCCACCAGCGGCGTG ACGCGCGTGCTCTCGCCGGGCCGCTTCGTCGAGAAGCAGGGCATGCTCGAGATCGCCTCCGACGACGTGTTCGAGCGGCA TCCCGACGCCGTGCTCGAAGCGTTCCTGCTCTACGAGACGACGCGCGGCGTGAAGGGGCTGTCGGCACGCACGCTGCGCG CCCTCTACAATTCGCGCGACGTGATGAACGGCGCCTGGCGGCGCGACCCGCGCAATCGCGCGACGTTCATGAAGATCCTG CAGCAACCCGAGGGGGTCACGCACGCGTTCCGGCTGCTGAACCAGACCAGCGTGCTCGGCCGCTACCTGCTGAACTTCCG GCGCATCGTCGGGCAGATGCAGCACGACCTCTACCACGTCTACACCGTCGATCAGCACATCCTGATGGTGTTGCGCAATA TCCGCCGCTTCACGGTGGCCGAGCACGCCCACGAATATCCGTTCTGCAGCCAGCTGATCGCCAACTTCGAGCGGCCCTGG GTGCTTTACGTGGCGGCGCTGTTCCACGACATCGCCAAGGGCCGCGGCGGCGATCATTCCACGCTCGGCATGGCCGACGC GCGGCGCTTCTGCCGCGAGCACGGCATCACCGGCGACGACGCGGCGCTCGTGGTCTGGCTCGTCCAGCATCACCTGACGA TGAGCCAGGTCGCGCAGAAGCAGGACACGAGCGACCCCGAGGTGGTCAAGCGCTTCGCGGCCAAGGTCGGCAACGAGCGC TGGCTGACCGCGCTCTACCTGCTGACGGTAGCCGACATCCGCGGCACCAGCCCGAAGGTCTGGAACACCTGGAAGGGCAA GCTGCTGGAAGACCTCTACCGCGCCACCAGCGCGGTGCTCGGCGGCGCCCAGCCCGACGCGCATTCCGAGCTGCGCACGC GCCGCGACGAGGCGCTCGCGCTGCTGCGGCTCGAGACCGTGCCCGAGGACGCGCACCGCCCGCTCTGGAGCCAGCTCGAC GTCGGCTATTTCCTGCGCCACGACGCGGCCGACATCGCCTGGCAGACGCGCGTGCTGTACCGCCACGTGCAAGCCGACAC CGCGATCGTGCGGGCGCGGCCCTCGCCCGTCGGCGACGCGCTGCAGGTGCTCGTCTACGTCAAGGACCGTTCGGACCTGT TCGCGGGCATCTGCGCGTACTTCGACCGCAACGGGCTGTCGGTGCTCGATGCGCGCGTGAGCACCACCAAGCACGGCTAC GCGCTCGACAACTTCATCGTCACGCAGACCGAGCGCGACGTGCAGTACCGCGACATCGCCAACCTCGTCGAGCAGCAGCT CGCCGACCGGCTGACCAGCGCGGCGCCGCTGCCCGAGCCCGCCAAGGGCCGGCTCTCGCGGCTGTCGCGCAGCTTCCCGA TCACGCCCCGCGTCGACCTGCGCGCCGACGAGCGTGGTCAGTACTACATCCTGTCCGTGTCCGCCAACGACCGGCCGGGC CTTCTGTATTCGATCGCGCGCGTGCTGGCCGAGCACCAGGTCGGCGTCCACGCGGCGCGGATCAACACGCTCGGCGAACG CGTCGAGGACGTGTTCCTGCTCGACGGCGCCGGCTTGTCCGACAACCGGCTCCAGATCCAGGTCGAAACCGAGCTGCTGC GCGCGATCGCAGCCTGA
Upstream 100 bases:
>100_bases GCAGGCCACGCGCCCGGTCCGCCCGGCCTGCTTGCTCGGCTTCATCCGTTTCAGCTGTCGCCATTCCACCGCCTCACCTG CCTCGTTCGCCATCGCCACC
Downstream 100 bases:
>100_bases GTGAAAGAAAGACAGCGTTTATGCGCACCAAACTGACCATCAAGCATCCTCGCCCGGCATCGCCGTCCCGCGCCCCGGTC CGCTCAGGCAGCCTCGTCGC
Product: PII uridylyl-transferase
Products: NA
Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]
Number of amino acids: Translated: 858; Mature: 857
Protein sequence:
>858_residues MSVPAVSAAAAPARKAEFRAVKAELITRFRAATRVEALMRALSRATDDALRQIWDQCELPGSLALVAVGGFGRGELAPHS DVDILVLLPDAHDGEFDARIERFIGLAWDLGLEIGSSVRTVDECIAESARDVTVQTSLLEARRVTGSVTLFRRAVARYRE ALDPHAFFQAKVLELRQRQAKFQDTPYSLEPNVKESPGGLRDLQTILWIARAADFGNSWRELHTRGLITAREARELRRNE SFLKALRARLHVITGRRQDILVFDLQTQAAESFGYLPTPAKRASEQLMRRYYWAAKAVTQLATILIQNIEAQLFPATSGV TRVLSPGRFVEKQGMLEIASDDVFERHPDAVLEAFLLYETTRGVKGLSARTLRALYNSRDVMNGAWRRDPRNRATFMKIL QQPEGVTHAFRLLNQTSVLGRYLLNFRRIVGQMQHDLYHVYTVDQHILMVLRNIRRFTVAEHAHEYPFCSQLIANFERPW VLYVAALFHDIAKGRGGDHSTLGMADARRFCREHGITGDDAALVVWLVQHHLTMSQVAQKQDTSDPEVVKRFAAKVGNER WLTALYLLTVADIRGTSPKVWNTWKGKLLEDLYRATSAVLGGAQPDAHSELRTRRDEALALLRLETVPEDAHRPLWSQLD VGYFLRHDAADIAWQTRVLYRHVQADTAIVRARPSPVGDALQVLVYVKDRSDLFAGICAYFDRNGLSVLDARVSTTKHGY ALDNFIVTQTERDVQYRDIANLVEQQLADRLTSAAPLPEPAKGRLSRLSRSFPITPRVDLRADERGQYYILSVSANDRPG LLYSIARVLAEHQVGVHAARINTLGERVEDVFLLDGAGLSDNRLQIQVETELLRAIAA
Sequences:
>Translated_858_residues MSVPAVSAAAAPARKAEFRAVKAELITRFRAATRVEALMRALSRATDDALRQIWDQCELPGSLALVAVGGFGRGELAPHS DVDILVLLPDAHDGEFDARIERFIGLAWDLGLEIGSSVRTVDECIAESARDVTVQTSLLEARRVTGSVTLFRRAVARYRE ALDPHAFFQAKVLELRQRQAKFQDTPYSLEPNVKESPGGLRDLQTILWIARAADFGNSWRELHTRGLITAREARELRRNE SFLKALRARLHVITGRRQDILVFDLQTQAAESFGYLPTPAKRASEQLMRRYYWAAKAVTQLATILIQNIEAQLFPATSGV TRVLSPGRFVEKQGMLEIASDDVFERHPDAVLEAFLLYETTRGVKGLSARTLRALYNSRDVMNGAWRRDPRNRATFMKIL QQPEGVTHAFRLLNQTSVLGRYLLNFRRIVGQMQHDLYHVYTVDQHILMVLRNIRRFTVAEHAHEYPFCSQLIANFERPW VLYVAALFHDIAKGRGGDHSTLGMADARRFCREHGITGDDAALVVWLVQHHLTMSQVAQKQDTSDPEVVKRFAAKVGNER WLTALYLLTVADIRGTSPKVWNTWKGKLLEDLYRATSAVLGGAQPDAHSELRTRRDEALALLRLETVPEDAHRPLWSQLD VGYFLRHDAADIAWQTRVLYRHVQADTAIVRARPSPVGDALQVLVYVKDRSDLFAGICAYFDRNGLSVLDARVSTTKHGY ALDNFIVTQTERDVQYRDIANLVEQQLADRLTSAAPLPEPAKGRLSRLSRSFPITPRVDLRADERGQYYILSVSANDRPG LLYSIARVLAEHQVGVHAARINTLGERVEDVFLLDGAGLSDNRLQIQVETELLRAIAA >Mature_857_residues SVPAVSAAAAPARKAEFRAVKAELITRFRAATRVEALMRALSRATDDALRQIWDQCELPGSLALVAVGGFGRGELAPHSD VDILVLLPDAHDGEFDARIERFIGLAWDLGLEIGSSVRTVDECIAESARDVTVQTSLLEARRVTGSVTLFRRAVARYREA LDPHAFFQAKVLELRQRQAKFQDTPYSLEPNVKESPGGLRDLQTILWIARAADFGNSWRELHTRGLITAREARELRRNES FLKALRARLHVITGRRQDILVFDLQTQAAESFGYLPTPAKRASEQLMRRYYWAAKAVTQLATILIQNIEAQLFPATSGVT RVLSPGRFVEKQGMLEIASDDVFERHPDAVLEAFLLYETTRGVKGLSARTLRALYNSRDVMNGAWRRDPRNRATFMKILQ QPEGVTHAFRLLNQTSVLGRYLLNFRRIVGQMQHDLYHVYTVDQHILMVLRNIRRFTVAEHAHEYPFCSQLIANFERPWV LYVAALFHDIAKGRGGDHSTLGMADARRFCREHGITGDDAALVVWLVQHHLTMSQVAQKQDTSDPEVVKRFAAKVGNERW LTALYLLTVADIRGTSPKVWNTWKGKLLEDLYRATSAVLGGAQPDAHSELRTRRDEALALLRLETVPEDAHRPLWSQLDV GYFLRHDAADIAWQTRVLYRHVQADTAIVRARPSPVGDALQVLVYVKDRSDLFAGICAYFDRNGLSVLDARVSTTKHGYA LDNFIVTQTERDVQYRDIANLVEQQLADRLTSAAPLPEPAKGRLSRLSRSFPITPRVDLRADERGQYYILSVSANDRPGL LYSIARVLAEHQVGVHAARINTLGERVEDVFLLDGAGLSDNRLQIQVETELLRAIAA
Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]
COG id: COG2844
COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnD family [H]
Homologues:
Organism=Escherichia coli, GI1786363, Length=855, Percent_Identity=34.9707602339181, Blast_Score=492, Evalue=1e-140,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR010043 - InterPro: IPR003607 - InterPro: IPR002934 - InterPro: IPR013546 [H]
Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2 [H]
EC number: =2.7.7.59 [H]
Molecular weight: Translated: 96571; Mature: 96440
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPAVSAAAAPARKAEFRAVKAELITRFRAATRVEALMRALSRATDDALRQIWDQCELP CCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GSLALVAVGGFGRGELAPHSDVDILVLLPDAHDGEFDARIERFIGLAWDLGLEIGSSVRT CCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH VDECIAESARDVTVQTSLLEARRVTGSVTLFRRAVARYREALDPHAFFQAKVLELRQRQA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KFQDTPYSLEPNVKESPGGLRDLQTILWIARAADFGNSWRELHTRGLITAREARELRRNE HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHH SFLKALRARLHVITGRRQDILVFDLQTQAAESFGYLPTPAKRASEQLMRRYYWAAKAVTQ HHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LATILIQNIEAQLFPATSGVTRVLSPGRFVEKQGMLEIASDDVFERHPDAVLEAFLLYET HHHHHHHHHHHHEECCCCCHHHHCCCCCHHHHCCCHHHHCCHHHHCCHHHHHHHHHHHHH TRGVKGLSARTLRALYNSRDVMNGAWRRDPRNRATFMKILQQPEGVTHAFRLLNQTSVLG HCCCCCCHHHHHHHHHHCHHHHCCHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RYLLNFRRIVGQMQHDLYHVYTVDQHILMVLRNIRRFTVAEHAHEYPFCSQLIANFERPW HHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCH VLYVAALFHDIAKGRGGDHSTLGMADARRFCREHGITGDDAALVVWLVQHHLTMSQVAQK HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH QDTSDPEVVKRFAAKVGNERWLTALYLLTVADIRGTSPKVWNTWKGKLLEDLYRATSAVL CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH GGAQPDAHSELRTRRDEALALLRLETVPEDAHRPLWSQLDVGYFLRHDAADIAWQTRVLY CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHCCCHHHHHCCHHHHHHHHHHHH RHVQADTAIVRARPSPVGDALQVLVYVKDRSDLFAGICAYFDRNGLSVLDARVSTTKHGY HHHHHCCEEEEECCCCHHHHHEEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC ALDNFIVTQTERDVQYRDIANLVEQQLADRLTSAAPLPEPAKGRLSRLSRSFPITPRVDL CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCC RADERGQYYILSVSANDRPGLLYSIARVLAEHQVGVHAARINTLGERVEDVFLLDGAGLS CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCC DNRLQIQVETELLRAIAA CCEEEEEEHHHHHHHHCC >Mature Secondary Structure SVPAVSAAAAPARKAEFRAVKAELITRFRAATRVEALMRALSRATDDALRQIWDQCELP CCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GSLALVAVGGFGRGELAPHSDVDILVLLPDAHDGEFDARIERFIGLAWDLGLEIGSSVRT CCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH VDECIAESARDVTVQTSLLEARRVTGSVTLFRRAVARYREALDPHAFFQAKVLELRQRQA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KFQDTPYSLEPNVKESPGGLRDLQTILWIARAADFGNSWRELHTRGLITAREARELRRNE HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHH SFLKALRARLHVITGRRQDILVFDLQTQAAESFGYLPTPAKRASEQLMRRYYWAAKAVTQ HHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LATILIQNIEAQLFPATSGVTRVLSPGRFVEKQGMLEIASDDVFERHPDAVLEAFLLYET HHHHHHHHHHHHEECCCCCHHHHCCCCCHHHHCCCHHHHCCHHHHCCHHHHHHHHHHHHH TRGVKGLSARTLRALYNSRDVMNGAWRRDPRNRATFMKILQQPEGVTHAFRLLNQTSVLG HCCCCCCHHHHHHHHHHCHHHHCCHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RYLLNFRRIVGQMQHDLYHVYTVDQHILMVLRNIRRFTVAEHAHEYPFCSQLIANFERPW HHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCH VLYVAALFHDIAKGRGGDHSTLGMADARRFCREHGITGDDAALVVWLVQHHLTMSQVAQK HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH QDTSDPEVVKRFAAKVGNERWLTALYLLTVADIRGTSPKVWNTWKGKLLEDLYRATSAVL CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH GGAQPDAHSELRTRRDEALALLRLETVPEDAHRPLWSQLDVGYFLRHDAADIAWQTRVLY CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHCCCHHHHHCCHHHHHHHHHHHH RHVQADTAIVRARPSPVGDALQVLVYVKDRSDLFAGICAYFDRNGLSVLDARVSTTKHGY HHHHHCCEEEEECCCCHHHHHEEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC ALDNFIVTQTERDVQYRDIANLVEQQLADRLTSAAPLPEPAKGRLSRLSRSFPITPRVDL CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCC RADERGQYYILSVSANDRPGLLYSIARVLAEHQVGVHAARINTLGERVEDVFLLDGAGLS CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCC DNRLQIQVETELLRAIAA CCEEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA