Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is torD [C]

Identifier: 238026866

GI number: 238026866

Start: 1347942

End: 1348634

Strand: Direct

Name: torD [C]

Synonym: bglu_1g12340

Alternate gene names: 238026866

Gene position: 1347942-1348634 (Clockwise)

Preceding gene: 238026865

Following gene: 238026867

Centisome position: 34.51

GC content: 74.46

Gene sequence:

>693_bases
ATGACGAGCGAGGCGGACGAATTCCGCGCGTTCGTGGTGGCCTGGATCGCCGGGTTGCTGGCCGCTTCGCCCGATGCCGA
TGCCGTGGCGCGCTACCGTGAGCCCGAGGCCGCGGCGCTGTTCGATGCGCTCGCGCTCGAACTCGACTGCGCGCAGGCGA
TCGCCACGATGCGTGCCGTCCTGGTCAGCGATGCGGCGCCGCGCGAGGTGGCGCTCGACCTGTCGGTCGCGCACACGCGC
CTGTTCGAGGGCGTGCACGGTACCGTGGCCGTGCCGCTCTGCGAGAGCGCGTACACCGGAACGCGCTGGGTCGATCGGGC
CGCGCACGAGGTCGCCGCGCTGCTGCGGCGCGTCGGCCTGGACGTGCGCGGCGGCGAGCCGCCCGATCACCTGTGCGTCG
AGCTGGCGCTGTTCGCGCGCCTGCTGCGCGATGGCAGCGCCGACGAACTCGCGGGGCTGGAGGCGCGATTGCGTCGCTGG
GTGCCGCGCTTCGTCGCGGATTGCCGCCGTGCCGACCCGGGAGGCTTCCACGGCGCCTTGGCCACGGTGCTGGGCGCGCT
GTTCGCCGCCTCGCCGCCGCCCGGCGGCGGGCCTGACGGCGCGACCGGCCACGCCGGCGACGTCGCGCAGGCGTGCTCGC
GCAGCTGCCGCTCACTCGCAAACGGAGGGCATCACCATGCCGAAGGAACCTGA

Upstream 100 bases:

>100_bases
GGCGCTTCACGTCGCTGGACGACGATCAATACCGCCTGCTGCTCGCCTGGCTGCAGAACCATTCGAAGGACGTCGGCCCC
GGCGTCGGGAGTGCGTCGCG

Downstream 100 bases:

>100_bases
TTCGCCGCTCGCCACCGGCCTTTCGCGGCGCGCATTCGTCAAGGCGGCGTTCGCCACCGGCCTGTATGGCGCGACGGCCG
GCTTCGGGCTGCTGGAGCCG

Product: DMSO-membrane protein

Products: NA

Alternate protein names: DMSO-Membrane Protein

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MTSEADEFRAFVVAWIAGLLAASPDADAVARYREPEAAALFDALALELDCAQAIATMRAVLVSDAAPREVALDLSVAHTR
LFEGVHGTVAVPLCESAYTGTRWVDRAAHEVAALLRRVGLDVRGGEPPDHLCVELALFARLLRDGSADELAGLEARLRRW
VPRFVADCRRADPGGFHGALATVLGALFAASPPPGGGPDGATGHAGDVAQACSRSCRSLANGGHHHAEGT

Sequences:

>Translated_230_residues
MTSEADEFRAFVVAWIAGLLAASPDADAVARYREPEAAALFDALALELDCAQAIATMRAVLVSDAAPREVALDLSVAHTR
LFEGVHGTVAVPLCESAYTGTRWVDRAAHEVAALLRRVGLDVRGGEPPDHLCVELALFARLLRDGSADELAGLEARLRRW
VPRFVADCRRADPGGFHGALATVLGALFAASPPPGGGPDGATGHAGDVAQACSRSCRSLANGGHHHAEGT
>Mature_229_residues
TSEADEFRAFVVAWIAGLLAASPDADAVARYREPEAAALFDALALELDCAQAIATMRAVLVSDAAPREVALDLSVAHTRL
FEGVHGTVAVPLCESAYTGTRWVDRAAHEVAALLRRVGLDVRGGEPPDHLCVELALFARLLRDGSADELAGLEARLRRWV
PRFVADCRRADPGGFHGALATVLGALFAASPPPGGGPDGATGHAGDVAQACSRSCRSLANGGHHHAEGT

Specific function: Involved In The Biogenesis Of Tora. Acts On Tora Before The Insertion Of The Molybdenum Cofactor And, As A Result, Probably Favors A Conformation Of The Apoenzyme That Is Competent For Acquiring The Cofactor. [C]

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24018; Mature: 23887

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSEADEFRAFVVAWIAGLLAASPDADAVARYREPEAAALFDALALELDCAQAIATMRAV
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVSDAAPREVALDLSVAHTRLFEGVHGTVAVPLCESAYTGTRWVDRAAHEVAALLRRVGL
HHCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
DVRGGEPPDHLCVELALFARLLRDGSADELAGLEARLRRWVPRFVADCRRADPGGFHGAL
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ATVLGALFAASPPPGGGPDGATGHAGDVAQACSRSCRSLANGGHHHAEGT
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TSEADEFRAFVVAWIAGLLAASPDADAVARYREPEAAALFDALALELDCAQAIATMRAV
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVSDAAPREVALDLSVAHTRLFEGVHGTVAVPLCESAYTGTRWVDRAAHEVAALLRRVGL
HHCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
DVRGGEPPDHLCVELALFARLLRDGSADELAGLEARLRRWVPRFVADCRRADPGGFHGAL
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ATVLGALFAASPPPGGGPDGATGHAGDVAQACSRSCRSLANGGHHHAEGT
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA