Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is torD [C]
Identifier: 238026866
GI number: 238026866
Start: 1347942
End: 1348634
Strand: Direct
Name: torD [C]
Synonym: bglu_1g12340
Alternate gene names: 238026866
Gene position: 1347942-1348634 (Clockwise)
Preceding gene: 238026865
Following gene: 238026867
Centisome position: 34.51
GC content: 74.46
Gene sequence:
>693_bases ATGACGAGCGAGGCGGACGAATTCCGCGCGTTCGTGGTGGCCTGGATCGCCGGGTTGCTGGCCGCTTCGCCCGATGCCGA TGCCGTGGCGCGCTACCGTGAGCCCGAGGCCGCGGCGCTGTTCGATGCGCTCGCGCTCGAACTCGACTGCGCGCAGGCGA TCGCCACGATGCGTGCCGTCCTGGTCAGCGATGCGGCGCCGCGCGAGGTGGCGCTCGACCTGTCGGTCGCGCACACGCGC CTGTTCGAGGGCGTGCACGGTACCGTGGCCGTGCCGCTCTGCGAGAGCGCGTACACCGGAACGCGCTGGGTCGATCGGGC CGCGCACGAGGTCGCCGCGCTGCTGCGGCGCGTCGGCCTGGACGTGCGCGGCGGCGAGCCGCCCGATCACCTGTGCGTCG AGCTGGCGCTGTTCGCGCGCCTGCTGCGCGATGGCAGCGCCGACGAACTCGCGGGGCTGGAGGCGCGATTGCGTCGCTGG GTGCCGCGCTTCGTCGCGGATTGCCGCCGTGCCGACCCGGGAGGCTTCCACGGCGCCTTGGCCACGGTGCTGGGCGCGCT GTTCGCCGCCTCGCCGCCGCCCGGCGGCGGGCCTGACGGCGCGACCGGCCACGCCGGCGACGTCGCGCAGGCGTGCTCGC GCAGCTGCCGCTCACTCGCAAACGGAGGGCATCACCATGCCGAAGGAACCTGA
Upstream 100 bases:
>100_bases GGCGCTTCACGTCGCTGGACGACGATCAATACCGCCTGCTGCTCGCCTGGCTGCAGAACCATTCGAAGGACGTCGGCCCC GGCGTCGGGAGTGCGTCGCG
Downstream 100 bases:
>100_bases TTCGCCGCTCGCCACCGGCCTTTCGCGGCGCGCATTCGTCAAGGCGGCGTTCGCCACCGGCCTGTATGGCGCGACGGCCG GCTTCGGGCTGCTGGAGCCG
Product: DMSO-membrane protein
Products: NA
Alternate protein names: DMSO-Membrane Protein
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MTSEADEFRAFVVAWIAGLLAASPDADAVARYREPEAAALFDALALELDCAQAIATMRAVLVSDAAPREVALDLSVAHTR LFEGVHGTVAVPLCESAYTGTRWVDRAAHEVAALLRRVGLDVRGGEPPDHLCVELALFARLLRDGSADELAGLEARLRRW VPRFVADCRRADPGGFHGALATVLGALFAASPPPGGGPDGATGHAGDVAQACSRSCRSLANGGHHHAEGT
Sequences:
>Translated_230_residues MTSEADEFRAFVVAWIAGLLAASPDADAVARYREPEAAALFDALALELDCAQAIATMRAVLVSDAAPREVALDLSVAHTR LFEGVHGTVAVPLCESAYTGTRWVDRAAHEVAALLRRVGLDVRGGEPPDHLCVELALFARLLRDGSADELAGLEARLRRW VPRFVADCRRADPGGFHGALATVLGALFAASPPPGGGPDGATGHAGDVAQACSRSCRSLANGGHHHAEGT >Mature_229_residues TSEADEFRAFVVAWIAGLLAASPDADAVARYREPEAAALFDALALELDCAQAIATMRAVLVSDAAPREVALDLSVAHTRL FEGVHGTVAVPLCESAYTGTRWVDRAAHEVAALLRRVGLDVRGGEPPDHLCVELALFARLLRDGSADELAGLEARLRRWV PRFVADCRRADPGGFHGALATVLGALFAASPPPGGGPDGATGHAGDVAQACSRSCRSLANGGHHHAEGT
Specific function: Involved In The Biogenesis Of Tora. Acts On Tora Before The Insertion Of The Molybdenum Cofactor And, As A Result, Probably Favors A Conformation Of The Apoenzyme That Is Competent For Acquiring The Cofactor. [C]
COG id: COG3381
COG function: function code R; Uncharacterized component of anaerobic dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24018; Mature: 23887
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSEADEFRAFVVAWIAGLLAASPDADAVARYREPEAAALFDALALELDCAQAIATMRAV CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LVSDAAPREVALDLSVAHTRLFEGVHGTVAVPLCESAYTGTRWVDRAAHEVAALLRRVGL HHCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC DVRGGEPPDHLCVELALFARLLRDGSADELAGLEARLRRWVPRFVADCRRADPGGFHGAL CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH ATVLGALFAASPPPGGGPDGATGHAGDVAQACSRSCRSLANGGHHHAEGT HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TSEADEFRAFVVAWIAGLLAASPDADAVARYREPEAAALFDALALELDCAQAIATMRAV CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LVSDAAPREVALDLSVAHTRLFEGVHGTVAVPLCESAYTGTRWVDRAAHEVAALLRRVGL HHCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC DVRGGEPPDHLCVELALFARLLRDGSADELAGLEARLRRWVPRFVADCRRADPGGFHGAL CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH ATVLGALFAASPPPGGGPDGATGHAGDVAQACSRSCRSLANGGHHHAEGT HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA