Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026856

Identifier: 238026856

GI number: 238026856

Start: 1334776

End: 1335747

Strand: Direct

Name: 238026856

Synonym: bglu_1g12240

Alternate gene names: NA

Gene position: 1334776-1335747 (Clockwise)

Preceding gene: 238026854

Following gene: 238026857

Centisome position: 34.17

GC content: 74.49

Gene sequence:

>972_bases
CTGGTGTTCCCGGCGCATGTCGACACCATCGGTGTGGCGCGCGAGCGCGAGCGCTGGCCCGTCGACGCGTTCGCGCGCGA
GCGCCGCGAAGGGCGGCTCTACGGCCGCGGCGCAGCCGACATGAACGGCGGGACGGTAGCGGTGGCCGCGCTGAATCCAT
GCCTGGCCGGCTGGCCGCCGCAGGGTCGCCAACTGCTGGCGGTCTCGGCGGCCGAGAACGCGAACTGCCGGCGCGCGCCG
CTGATTTTGGCGCCCGGCAAGCGCGCCTTCGCCACGCAGAGCGGCGCACGGTGGTTGCATGCCAGCGCGCGCGGCGGCTA
TGGGCACGACGCGTTCTCGAAGGACCGCACGGGCGACCGCGGCGACGCGATCGGGCGGCTCGCGCGCTATCTTGACTGCG
CGCGCGTCTCGCGACTCGCGGAGCCGGCCCACTGCCTCGTCGGCGCGTCCAGCGTCGACGTCGGCACGATTCGCGGTGGC
CCGGCGACGCCGCGCGCGCGACCCCGGGGGCCGGCCGACATCGGCCTGCGGCTGGTGCCGGGCCGGCGGCACGAGCCGGT
GGCGGCCGCGTGGCGCGCGATTGCCGGGCCGCAGGTCATGCTCGAGTCGCTCGATTCCGCGTCACGGCCAGATCGGCCAC
GACGATCATCCGTTCGCGGCGCCGCCGTGTGTCGTGGCTTGCCGCGCGCAGGGCATGGCCGAACCGGGGCCGGCCGGCGT
TGCCGATCACTCGGACGGCGCCGTGACAGCGCCCGCTCCGGGGTTATCGATGGTGAGCGTCGGACCGGGCGAGGTGGGCA
TGAAGGGCGCCATCTACGACTACCTCACGCTCGACAAGCTGGATGCGTCGATGCCGATCGTCGAGCGCGTGGCCCGCGCA
TAGCTGCAATGAACGCGCGGCTCCCCCCCACGCGCGGCGCGGCGCCGCGCCGCGCGTGTCGACCGTTTCCCGATGGAGCC
ATCCAGCCATGA

Upstream 100 bases:

>100_bases
TTCAATCCGCTTTCGACGATTTACTCGACTCGCTGATCGTGGCGGCGGTGTTCTTCGTGAAGATCGTGACGGTGCTTGAC
GCGCCGGCCGACGCACCGCG

Downstream 100 bases:

>100_bases
TCCTGCCGCCGTTGAACGCCCTGCGTGCCTTCGAGGCCACCGCACGCCTGAAGAGCCTGTCGCGAGCGGGCGAAGAACTG
CACGTGACGCACGCCGCCGT

Product: acetylornithine deacetylase ArgE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MVFPAHVDTIGVARERERWPVDAFARERREGRLYGRGAADMNGGTVAVAALNPCLAGWPPQGRQLLAVSAAENANCRRAP
LILAPGKRAFATQSGARWLHASARGGYGHDAFSKDRTGDRGDAIGRLARYLDCARVSRLAEPAHCLVGASSVDVGTIRGG
PATPRARPRGPADIGLRLVPGRRHEPVAAAWRAIAGPQVMLESLDSASRPDRPRRSSVRGAAVCRGLPRAGHGRTGAGRR
CRSLGRRRDSARSGVIDGERRTGRGGHEGRHLRLPHARQAGCVDADRRARGPRIAAMNARLPPTRGAAPRRACRPFPDGA
IQP

Sequences:

>Translated_323_residues
MVFPAHVDTIGVARERERWPVDAFARERREGRLYGRGAADMNGGTVAVAALNPCLAGWPPQGRQLLAVSAAENANCRRAP
LILAPGKRAFATQSGARWLHASARGGYGHDAFSKDRTGDRGDAIGRLARYLDCARVSRLAEPAHCLVGASSVDVGTIRGG
PATPRARPRGPADIGLRLVPGRRHEPVAAAWRAIAGPQVMLESLDSASRPDRPRRSSVRGAAVCRGLPRAGHGRTGAGRR
CRSLGRRRDSARSGVIDGERRTGRGGHEGRHLRLPHARQAGCVDADRRARGPRIAAMNARLPPTRGAAPRRACRPFPDGA
IQP
>Mature_323_residues
MVFPAHVDTIGVARERERWPVDAFARERREGRLYGRGAADMNGGTVAVAALNPCLAGWPPQGRQLLAVSAAENANCRRAP
LILAPGKRAFATQSGARWLHASARGGYGHDAFSKDRTGDRGDAIGRLARYLDCARVSRLAEPAHCLVGASSVDVGTIRGG
PATPRARPRGPADIGLRLVPGRRHEPVAAAWRAIAGPQVMLESLDSASRPDRPRRSSVRGAAVCRGLPRAGHGRTGAGRR
CRSLGRRRDSARSGVIDGERRTGRGGHEGRHLRLPHARQAGCVDADRRARGPRIAAMNARLPPTRGAAPRRACRPFPDGA
IQP

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34502; Mature: 34502

Theoretical pI: Translated: 12.19; Mature: 12.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFPAHVDTIGVARERERWPVDAFARERREGRLYGRGAADMNGGTVAVAALNPCLAGWPP
CCCCCCCCHHHCHHHHCCCCHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCHHHCCCCC
QGRQLLAVSAAENANCRRAPLILAPGKRAFATQSGARWLHASARGGYGHDAFSKDRTGDR
CCCEEEEEECCCCCCCCCCCEEECCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCH
GDAIGRLARYLDCARVSRLAEPAHCLVGASSVDVGTIRGGPATPRARPRGPADIGLRLVP
HHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCEEEECCCCCCCCCCCCCCHHCCEEECC
GRRHEPVAAAWRAIAGPQVMLESLDSASRPDRPRRSSVRGAAVCRGLPRAGHGRTGAGRR
CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCHHH
CRSLGRRRDSARSGVIDGERRTGRGGHEGRHLRLPHARQAGCVDADRRARGPRIAAMNAR
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCEEEEECCC
LPPTRGAAPRRACRPFPDGAIQP
CCCCCCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MVFPAHVDTIGVARERERWPVDAFARERREGRLYGRGAADMNGGTVAVAALNPCLAGWPP
CCCCCCCCHHHCHHHHCCCCHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCHHHCCCCC
QGRQLLAVSAAENANCRRAPLILAPGKRAFATQSGARWLHASARGGYGHDAFSKDRTGDR
CCCEEEEEECCCCCCCCCCCEEECCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCH
GDAIGRLARYLDCARVSRLAEPAHCLVGASSVDVGTIRGGPATPRARPRGPADIGLRLVP
HHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCEEEECCCCCCCCCCCCCCHHCCEEECC
GRRHEPVAAAWRAIAGPQVMLESLDSASRPDRPRRSSVRGAAVCRGLPRAGHGRTGAGRR
CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCHHH
CRSLGRRRDSARSGVIDGERRTGRGGHEGRHLRLPHARQAGCVDADRRARGPRIAAMNAR
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCEEEEECCC
LPPTRGAAPRRACRPFPDGAIQP
CCCCCCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA