| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026856
Identifier: 238026856
GI number: 238026856
Start: 1334776
End: 1335747
Strand: Direct
Name: 238026856
Synonym: bglu_1g12240
Alternate gene names: NA
Gene position: 1334776-1335747 (Clockwise)
Preceding gene: 238026854
Following gene: 238026857
Centisome position: 34.17
GC content: 74.49
Gene sequence:
>972_bases CTGGTGTTCCCGGCGCATGTCGACACCATCGGTGTGGCGCGCGAGCGCGAGCGCTGGCCCGTCGACGCGTTCGCGCGCGA GCGCCGCGAAGGGCGGCTCTACGGCCGCGGCGCAGCCGACATGAACGGCGGGACGGTAGCGGTGGCCGCGCTGAATCCAT GCCTGGCCGGCTGGCCGCCGCAGGGTCGCCAACTGCTGGCGGTCTCGGCGGCCGAGAACGCGAACTGCCGGCGCGCGCCG CTGATTTTGGCGCCCGGCAAGCGCGCCTTCGCCACGCAGAGCGGCGCACGGTGGTTGCATGCCAGCGCGCGCGGCGGCTA TGGGCACGACGCGTTCTCGAAGGACCGCACGGGCGACCGCGGCGACGCGATCGGGCGGCTCGCGCGCTATCTTGACTGCG CGCGCGTCTCGCGACTCGCGGAGCCGGCCCACTGCCTCGTCGGCGCGTCCAGCGTCGACGTCGGCACGATTCGCGGTGGC CCGGCGACGCCGCGCGCGCGACCCCGGGGGCCGGCCGACATCGGCCTGCGGCTGGTGCCGGGCCGGCGGCACGAGCCGGT GGCGGCCGCGTGGCGCGCGATTGCCGGGCCGCAGGTCATGCTCGAGTCGCTCGATTCCGCGTCACGGCCAGATCGGCCAC GACGATCATCCGTTCGCGGCGCCGCCGTGTGTCGTGGCTTGCCGCGCGCAGGGCATGGCCGAACCGGGGCCGGCCGGCGT TGCCGATCACTCGGACGGCGCCGTGACAGCGCCCGCTCCGGGGTTATCGATGGTGAGCGTCGGACCGGGCGAGGTGGGCA TGAAGGGCGCCATCTACGACTACCTCACGCTCGACAAGCTGGATGCGTCGATGCCGATCGTCGAGCGCGTGGCCCGCGCA TAGCTGCAATGAACGCGCGGCTCCCCCCCACGCGCGGCGCGGCGCCGCGCCGCGCGTGTCGACCGTTTCCCGATGGAGCC ATCCAGCCATGA
Upstream 100 bases:
>100_bases TTCAATCCGCTTTCGACGATTTACTCGACTCGCTGATCGTGGCGGCGGTGTTCTTCGTGAAGATCGTGACGGTGCTTGAC GCGCCGGCCGACGCACCGCG
Downstream 100 bases:
>100_bases TCCTGCCGCCGTTGAACGCCCTGCGTGCCTTCGAGGCCACCGCACGCCTGAAGAGCCTGTCGCGAGCGGGCGAAGAACTG CACGTGACGCACGCCGCCGT
Product: acetylornithine deacetylase ArgE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MVFPAHVDTIGVARERERWPVDAFARERREGRLYGRGAADMNGGTVAVAALNPCLAGWPPQGRQLLAVSAAENANCRRAP LILAPGKRAFATQSGARWLHASARGGYGHDAFSKDRTGDRGDAIGRLARYLDCARVSRLAEPAHCLVGASSVDVGTIRGG PATPRARPRGPADIGLRLVPGRRHEPVAAAWRAIAGPQVMLESLDSASRPDRPRRSSVRGAAVCRGLPRAGHGRTGAGRR CRSLGRRRDSARSGVIDGERRTGRGGHEGRHLRLPHARQAGCVDADRRARGPRIAAMNARLPPTRGAAPRRACRPFPDGA IQP
Sequences:
>Translated_323_residues MVFPAHVDTIGVARERERWPVDAFARERREGRLYGRGAADMNGGTVAVAALNPCLAGWPPQGRQLLAVSAAENANCRRAP LILAPGKRAFATQSGARWLHASARGGYGHDAFSKDRTGDRGDAIGRLARYLDCARVSRLAEPAHCLVGASSVDVGTIRGG PATPRARPRGPADIGLRLVPGRRHEPVAAAWRAIAGPQVMLESLDSASRPDRPRRSSVRGAAVCRGLPRAGHGRTGAGRR CRSLGRRRDSARSGVIDGERRTGRGGHEGRHLRLPHARQAGCVDADRRARGPRIAAMNARLPPTRGAAPRRACRPFPDGA IQP >Mature_323_residues MVFPAHVDTIGVARERERWPVDAFARERREGRLYGRGAADMNGGTVAVAALNPCLAGWPPQGRQLLAVSAAENANCRRAP LILAPGKRAFATQSGARWLHASARGGYGHDAFSKDRTGDRGDAIGRLARYLDCARVSRLAEPAHCLVGASSVDVGTIRGG PATPRARPRGPADIGLRLVPGRRHEPVAAAWRAIAGPQVMLESLDSASRPDRPRRSSVRGAAVCRGLPRAGHGRTGAGRR CRSLGRRRDSARSGVIDGERRTGRGGHEGRHLRLPHARQAGCVDADRRARGPRIAAMNARLPPTRGAAPRRACRPFPDGA IQP
Specific function: Unknown
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34502; Mature: 34502
Theoretical pI: Translated: 12.19; Mature: 12.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFPAHVDTIGVARERERWPVDAFARERREGRLYGRGAADMNGGTVAVAALNPCLAGWPP CCCCCCCCHHHCHHHHCCCCHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCHHHCCCCC QGRQLLAVSAAENANCRRAPLILAPGKRAFATQSGARWLHASARGGYGHDAFSKDRTGDR CCCEEEEEECCCCCCCCCCCEEECCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCH GDAIGRLARYLDCARVSRLAEPAHCLVGASSVDVGTIRGGPATPRARPRGPADIGLRLVP HHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCEEEECCCCCCCCCCCCCCHHCCEEECC GRRHEPVAAAWRAIAGPQVMLESLDSASRPDRPRRSSVRGAAVCRGLPRAGHGRTGAGRR CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCHHH CRSLGRRRDSARSGVIDGERRTGRGGHEGRHLRLPHARQAGCVDADRRARGPRIAAMNAR HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCEEEEECCC LPPTRGAAPRRACRPFPDGAIQP CCCCCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure MVFPAHVDTIGVARERERWPVDAFARERREGRLYGRGAADMNGGTVAVAALNPCLAGWPP CCCCCCCCHHHCHHHHCCCCHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCHHHCCCCC QGRQLLAVSAAENANCRRAPLILAPGKRAFATQSGARWLHASARGGYGHDAFSKDRTGDR CCCEEEEEECCCCCCCCCCCEEECCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCH GDAIGRLARYLDCARVSRLAEPAHCLVGASSVDVGTIRGGPATPRARPRGPADIGLRLVP HHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCEEEECCCCCCCCCCCCCCHHCCEEECC GRRHEPVAAAWRAIAGPQVMLESLDSASRPDRPRRSSVRGAAVCRGLPRAGHGRTGAGRR CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCHHH CRSLGRRRDSARSGVIDGERRTGRGGHEGRHLRLPHARQAGCVDADRRARGPRIAAMNAR HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCEEEEECCC LPPTRGAAPRRACRPFPDGAIQP CCCCCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA