| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yeaS [C]
Identifier: 238026778
GI number: 238026778
Start: 1245884
End: 1246540
Strand: Direct
Name: yeaS [C]
Synonym: bglu_1g11360
Alternate gene names: 238026778
Gene position: 1245884-1246540 (Clockwise)
Preceding gene: 238026777
Following gene: 238026779
Centisome position: 31.89
GC content: 67.73
Gene sequence:
>657_bases ATGTTCGGCCACGCACTCGGAATCACCGACTTCTGGACCTACGTCGTCGGTGCGGTGTTCATCGTCCTGCTGCCCGGTCC GAACTCGATGTATGTGCTGTCGCTCGCTGCGCAGCGCGGCGTCAAGGCCGGATATCGCGCGGCCTGCGGCGTGTTCTTGG GCGACGCGGTGCTGATGCTGCTGTCGGCGGCCGGCGTCGCCTCGCTGCTGAAGGCGAACCCGCTGCTGTTCTCGGTCGTG AAATACGGCGGGGCTGCCTACCTGTTCGCGATCGGGTTCGCGATGCTGAGGAGCGGCTCGCGCGAGCTGCGCGCCGCGCC GGCGCGGGCCGCGGCGCCGCGCGCGGTGGACGGCGAGCGGCCGTTTCGCAAGGCGCTGCTCGTGAGCCTGTTGAACCCGA AGGCGATCCTGTTCTTCATTTCGTTCTTCATCCAGTTCGTCGATCCGACCTACCGCTATCCGGCCGTGTCGTTCCTCGTG CTGGGCGCGATATCGCAGTTCACGAGCTTCCTGTACCTGAGCACGCTGATCTTCGCGGGCGCGCGTCTTGCCGAACAGTT TCGCCGCCGCCGCAAGCTCGCGGCGGGCGCGGCGGGCGGCGTGGGCGGCCTGTTCATCGGCTTCGGCCTCAAGCTCGCGT TCGCGACGATCCGATGA
Upstream 100 bases:
>100_bases TCGCCCGGTCCGCACGACATCGGCTACCTGTTCGACCGCTTCACCGCGCTGATGGACACGGCCAAGGCGCGCGCCTGAGG CTCACGGGAGACGGCACATC
Downstream 100 bases:
>100_bases CCGGCTGCGCCGCCGCCGCGCATTAACGATTACTTTTTGAATACTCGAGCCATGCCAAAACGCACAGACATCAACAGCAT CCTCATCATCGGCGCCGGCC
Product: leucine export protein LeuE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MFGHALGITDFWTYVVGAVFIVLLPGPNSMYVLSLAAQRGVKAGYRAACGVFLGDAVLMLLSAAGVASLLKANPLLFSVV KYGGAAYLFAIGFAMLRSGSRELRAAPARAAAPRAVDGERPFRKALLVSLLNPKAILFFISFFIQFVDPTYRYPAVSFLV LGAISQFTSFLYLSTLIFAGARLAEQFRRRRKLAAGAAGGVGGLFIGFGLKLAFATIR
Sequences:
>Translated_218_residues MFGHALGITDFWTYVVGAVFIVLLPGPNSMYVLSLAAQRGVKAGYRAACGVFLGDAVLMLLSAAGVASLLKANPLLFSVV KYGGAAYLFAIGFAMLRSGSRELRAAPARAAAPRAVDGERPFRKALLVSLLNPKAILFFISFFIQFVDPTYRYPAVSFLV LGAISQFTSFLYLSTLIFAGARLAEQFRRRRKLAAGAAGGVGGLFIGFGLKLAFATIR >Mature_218_residues MFGHALGITDFWTYVVGAVFIVLLPGPNSMYVLSLAAQRGVKAGYRAACGVFLGDAVLMLLSAAGVASLLKANPLLFSVV KYGGAAYLFAIGFAMLRSGSRELRAAPARAAAPRAVDGERPFRKALLVSLLNPKAILFFISFFIQFVDPTYRYPAVSFLV LGAISQFTSFLYLSTLIFAGARLAEQFRRRRKLAAGAAGGVGGLFIGFGLKLAFATIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1788099, Length=211, Percent_Identity=45.0236966824645, Blast_Score=186, Evalue=1e-48, Organism=Escherichia coli, GI48994978, Length=204, Percent_Identity=31.3725490196078, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI48994979, Length=159, Percent_Identity=25.7861635220126, Blast_Score=64, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004778 - InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 23273; Mature: 23273
Theoretical pI: Translated: 11.33; Mature: 11.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGHALGITDFWTYVVGAVFIVLLPGPNSMYVLSLAAQRGVKAGYRAACGVFLGDAVLML CCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHH LSAAGVASLLKANPLLFSVVKYGGAAYLFAIGFAMLRSGSRELRAAPARAAAPRAVDGER HHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCCHHCCCCCCCCCC PFRKALLVSLLNPKAILFFISFFIQFVDPTYRYPAVSFLVLGAISQFTSFLYLSTLIFAG HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLAEQFRRRRKLAAGAAGGVGGLFIGFGLKLAFATIR HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFGHALGITDFWTYVVGAVFIVLLPGPNSMYVLSLAAQRGVKAGYRAACGVFLGDAVLML CCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHH LSAAGVASLLKANPLLFSVVKYGGAAYLFAIGFAMLRSGSRELRAAPARAAAPRAVDGER HHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCCHHCCCCCCCCCC PFRKALLVSLLNPKAILFFISFFIQFVDPTYRYPAVSFLVLGAISQFTSFLYLSTLIFAG HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLAEQFRRRRKLAAGAAGGVGGLFIGFGLKLAFATIR HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8169201; 10984043 [H]