| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is pckG [H]
Identifier: 238026755
GI number: 238026755
Start: 1221997
End: 1223862
Strand: Direct
Name: pckG [H]
Synonym: bglu_1g11130
Alternate gene names: 238026755
Gene position: 1221997-1223862 (Clockwise)
Preceding gene: 238026750
Following gene: 238026756
Centisome position: 31.28
GC content: 70.53
Gene sequence:
>1866_bases ATGACCCGAAGCCATGCGGTCGAGGCCAGGCATTCCGTCTCGCTCGACGTACCCGATTACGTCGCGCATCGCGGCCTGAT CGACTGGGTCGCGCGCGTCGCCGCGCTGACCGAGCCGCAGCGCGTGGTCTGGTGCGACGGCTCGCAGGCCGAATACGACC GGCTCTGCGAACAGATGGTCGCGCAGGGCACCCTGATCCGGCTCGATCCGCGCAAGCGGCCGAACTCGTTCCTCGCGCTG TCCGACCCCTCCGACGTGGCGCGCGTCGAGGATCGCACCTTCATCTGCAGCGAGTCGCGCGACGACGCCGGCCCGACCAA CCACTGGGTCGCGCCCGCCGAAATGCGCGCGACGCTCGACGGCCTGTTTCGCGGCGCGATGCGCGGCCGCACGCTGTACG TCGTGCCGTTCTCGATGGGGCCGCTCGGCTCGCCGATCGCGCACGTCGGCGTGGAGCTGTCCGACAGCCCCTACGTGGTC GTCAACATGCGGATCATGACGCGCATGGGCCGCGACGTGTATCGCGTGCTCGGCGAGGACGGCCACTTCGTGCCCTGCGT CCACAGCGTCGGCCATCCGCTCGCGGCCGGCGAGTCCGACGTGCGCTGGCCCTGCAACGACACCAAGTACATCGTCCATT TTCCCGAGACGCGCGAGATCTGGAGCTACGGCTCGGGCTACGGCGGCAACGCGCTGCTCGGCAAGAAATGCTTCGCGCTG CGGATCGCCTCGACCATGGGCCGCGACCAGGGCTGGCTCGCCGAGCACATGCTGATCCTCGGCGTGACCGCGCCGGACGG CACCAAGCGCCATATCGCGGCGGCCTTCCCTTCGGCCTGCGGCAAGACCAACTTCGCGATGCTGATCCCGCCGGCAGGCT TCGAGGGCTGGCGGGTCACCACGATCGGCGACGACATCGCCTGGCTCAAGCCCGGCGCCGACGGCCGGCTCTACGCGATC AACCCCGAGGCCGGTTATTTCGGCGTGGCGCCCGGCACCGGCGAGAAGACCAACCCGAACGCGCTCGCCACGCTGCGCGA GAACGTGATCTTCACCAACGTCGCGTTGACCGACGACGGCGACGTCTGGTGGGAAGGGCTGACCGACACGCCGCCCGCGC ATCTGCGCGACTGGCAGGGCAAGGACTGGACCCCCGAGATCGGCCGCGAGACGGGCCGCAAGGCCGCGCATCCGAACGCG CGCTTCACGGCGCCGGCCTCGCAATGCCCGTCGATCGACGCCGACTGGGACAATCCCGCCGGCGTCGCGATCGACGCGTT CGTGTTCGGCGGCCGGCGCTCGACCACGGTCCCGCTCGTGACCGAGGCGCGCGACTGGGTCGAAGGCGTCTACATGGCGG CCACCATGGGCTCCGAGACGACGGCCGCGGCCGCCGGCCAGCAGGGCGTGGTGCGGCGCGACCCGTTCGCGATGCTGCCG TTCTGCGGCTACAACATGAGCGATTACTTCTCGCACTGGCTCGCGCTCGGCGCGCGGCTCGAAGCGGCCGGGGCGACGCT GCCGAAGATCTACTGCGTGAACTGGTTCCGCAAGGACGCGCAGGGCCGCTTCGCGTGGCCGGGCTTCGGCGAGAACATGC GCGTGCTGCAGTGGATGCTCGAGCGTCTCGACGGGCGCGGCGAGGGCGTCGAGCACGCGCTCGGCGTGACGCCGCGCTAC GGTGATCTGCACTGGGACGGGCTGGCGTTCACGCCCGAGCAGTACCAACAGGTGGCGTCGGTCGATCGCGATGCGTGGCG CGACGAGCTTGCGCTGCACGACGAGCTGTTCGACCGGCTGAAGGCGCGCCTGCCCAAGGCGCTGGCCGATACGCGCGCGA GGTTCGAGGCCCGTCTGGCCGGCTGA
Upstream 100 bases:
>100_bases GAGAACTGCCGCGCGCCCGGCCGGGCAGCATCGGCGCGCCGCGATGTCCAGGCTGACAGGCGCGCCCCCGAATTCGCTTT CCCACTACCAGGAGAACACC
Downstream 100 bases:
>100_bases CGCAACCCGCGCCGGGCGCGGGCGACGAGGCCGCGCGGGCTGCGGGCCGCACGGCATTTTTTATGAGGAATTCGTTGCGG GCGCAACCGGGTGGCCGGTG
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 621; Mature: 620
Protein sequence:
>621_residues MTRSHAVEARHSVSLDVPDYVAHRGLIDWVARVAALTEPQRVVWCDGSQAEYDRLCEQMVAQGTLIRLDPRKRPNSFLAL SDPSDVARVEDRTFICSESRDDAGPTNHWVAPAEMRATLDGLFRGAMRGRTLYVVPFSMGPLGSPIAHVGVELSDSPYVV VNMRIMTRMGRDVYRVLGEDGHFVPCVHSVGHPLAAGESDVRWPCNDTKYIVHFPETREIWSYGSGYGGNALLGKKCFAL RIASTMGRDQGWLAEHMLILGVTAPDGTKRHIAAAFPSACGKTNFAMLIPPAGFEGWRVTTIGDDIAWLKPGADGRLYAI NPEAGYFGVAPGTGEKTNPNALATLRENVIFTNVALTDDGDVWWEGLTDTPPAHLRDWQGKDWTPEIGRETGRKAAHPNA RFTAPASQCPSIDADWDNPAGVAIDAFVFGGRRSTTVPLVTEARDWVEGVYMAATMGSETTAAAAGQQGVVRRDPFAMLP FCGYNMSDYFSHWLALGARLEAAGATLPKIYCVNWFRKDAQGRFAWPGFGENMRVLQWMLERLDGRGEGVEHALGVTPRY GDLHWDGLAFTPEQYQQVASVDRDAWRDELALHDELFDRLKARLPKALADTRARFEARLAG
Sequences:
>Translated_621_residues MTRSHAVEARHSVSLDVPDYVAHRGLIDWVARVAALTEPQRVVWCDGSQAEYDRLCEQMVAQGTLIRLDPRKRPNSFLAL SDPSDVARVEDRTFICSESRDDAGPTNHWVAPAEMRATLDGLFRGAMRGRTLYVVPFSMGPLGSPIAHVGVELSDSPYVV VNMRIMTRMGRDVYRVLGEDGHFVPCVHSVGHPLAAGESDVRWPCNDTKYIVHFPETREIWSYGSGYGGNALLGKKCFAL RIASTMGRDQGWLAEHMLILGVTAPDGTKRHIAAAFPSACGKTNFAMLIPPAGFEGWRVTTIGDDIAWLKPGADGRLYAI NPEAGYFGVAPGTGEKTNPNALATLRENVIFTNVALTDDGDVWWEGLTDTPPAHLRDWQGKDWTPEIGRETGRKAAHPNA RFTAPASQCPSIDADWDNPAGVAIDAFVFGGRRSTTVPLVTEARDWVEGVYMAATMGSETTAAAAGQQGVVRRDPFAMLP FCGYNMSDYFSHWLALGARLEAAGATLPKIYCVNWFRKDAQGRFAWPGFGENMRVLQWMLERLDGRGEGVEHALGVTPRY GDLHWDGLAFTPEQYQQVASVDRDAWRDELALHDELFDRLKARLPKALADTRARFEARLAG >Mature_620_residues TRSHAVEARHSVSLDVPDYVAHRGLIDWVARVAALTEPQRVVWCDGSQAEYDRLCEQMVAQGTLIRLDPRKRPNSFLALS DPSDVARVEDRTFICSESRDDAGPTNHWVAPAEMRATLDGLFRGAMRGRTLYVVPFSMGPLGSPIAHVGVELSDSPYVVV NMRIMTRMGRDVYRVLGEDGHFVPCVHSVGHPLAAGESDVRWPCNDTKYIVHFPETREIWSYGSGYGGNALLGKKCFALR IASTMGRDQGWLAEHMLILGVTAPDGTKRHIAAAFPSACGKTNFAMLIPPAGFEGWRVTTIGDDIAWLKPGADGRLYAIN PEAGYFGVAPGTGEKTNPNALATLRENVIFTNVALTDDGDVWWEGLTDTPPAHLRDWQGKDWTPEIGRETGRKAAHPNAR FTAPASQCPSIDADWDNPAGVAIDAFVFGGRRSTTVPLVTEARDWVEGVYMAATMGSETTAAAAGQQGVVRRDPFAMLPF CGYNMSDYFSHWLALGARLEAAGATLPKIYCVNWFRKDAQGRFAWPGFGENMRVLQWMLERLDGRGEGVEHALGVTPRYG DLHWDGLAFTPEQYQQVASVDRDAWRDELALHDELFDRLKARLPKALADTRARFEARLAG
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle [H]
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family [H]
Homologues:
Organism=Homo sapiens, GI187281517, Length=607, Percent_Identity=48.7644151565074, Blast_Score=583, Evalue=1e-166, Organism=Homo sapiens, GI66346721, Length=609, Percent_Identity=49.7536945812808, Blast_Score=573, Evalue=1e-163, Organism=Homo sapiens, GI66346723, Length=387, Percent_Identity=52.9715762273902, Blast_Score=390, Evalue=1e-108, Organism=Caenorhabditis elegans, GI17555492, Length=617, Percent_Identity=48.6223662884927, Blast_Score=557, Evalue=1e-159, Organism=Caenorhabditis elegans, GI71989645, Length=606, Percent_Identity=48.019801980198, Blast_Score=555, Evalue=1e-158, Organism=Caenorhabditis elegans, GI71989658, Length=606, Percent_Identity=48.019801980198, Blast_Score=554, Evalue=1e-158, Organism=Caenorhabditis elegans, GI71989653, Length=596, Percent_Identity=48.3221476510067, Blast_Score=549, Evalue=1e-156, Organism=Caenorhabditis elegans, GI32564411, Length=558, Percent_Identity=51.2544802867383, Blast_Score=536, Evalue=1e-152, Organism=Caenorhabditis elegans, GI32564407, Length=529, Percent_Identity=51.2287334593573, Blast_Score=510, Evalue=1e-145, Organism=Caenorhabditis elegans, GI71989649, Length=532, Percent_Identity=47.9323308270677, Blast_Score=483, Evalue=1e-136, Organism=Caenorhabditis elegans, GI32564409, Length=375, Percent_Identity=48.8, Blast_Score=330, Evalue=1e-90, Organism=Caenorhabditis elegans, GI17540956, Length=549, Percent_Identity=24.7723132969035, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24655085, Length=608, Percent_Identity=48.5197368421053, Blast_Score=577, Evalue=1e-164, Organism=Drosophila melanogaster, GI24655082, Length=607, Percent_Identity=47.9406919275124, Blast_Score=561, Evalue=1e-160, Organism=Drosophila melanogaster, GI161077226, Length=576, Percent_Identity=48.7847222222222, Blast_Score=541, Evalue=1e-154, Organism=Drosophila melanogaster, GI24655088, Length=509, Percent_Identity=50.6876227897839, Blast_Score=513, Evalue=1e-145,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 [H]
Pfam domain/function: PF00821 PEPCK [H]
EC number: =4.1.1.32 [H]
Molecular weight: Translated: 68460; Mature: 68329
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00505 PEPCK_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSHAVEARHSVSLDVPDYVAHRGLIDWVARVAALTEPQRVVWCDGSQAEYDRLCEQMV CCCCHHCCHHCEEECCCHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH AQGTLIRLDPRKRPNSFLALSDPSDVARVEDRTFICSESRDDAGPTNHWVAPAEMRATLD HCCCEEEECCCCCCCCEEEECCCCHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH GLFRGAMRGRTLYVVPFSMGPLGSPIAHVGVELSDSPYVVVNMRIMTRMGRDVYRVLGED HHHHHHHCCCEEEEEEECCCCCCCCHHHCCEEECCCCEEEEEEHHHHHHCHHHHHHHCCC GHFVPCVHSVGHPLAAGESDVRWPCNDTKYIVHFPETREIWSYGSGYGGNALLGKKCFAL CCEEEEHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCHHCCHHHHH RIASTMGRDQGWLAEHMLILGVTAPDGTKRHIAAAFPSACGKTNFAMLIPPAGFEGWRVT HHHHHCCCCCCHHHCEEEEEEEECCCCCCHHHHHHCHHHCCCCCEEEEECCCCCCCCEEE TIGDDIAWLKPGADGRLYAINPEAGYFGVAPGTGEKTNPNALATLRENVIFTNVALTDDG EECCCEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCHHHHHHHCCEEEEEEEEECCC DVWWEGLTDTPPAHLRDWQGKDWTPEIGRETGRKAAHPNARFTAPASQCPSIDADWDNPA CEEECCCCCCCCHHHCCCCCCCCCHHHHHHCCCCCCCCCCEEECCHHHCCCCCCCCCCCC GVAIDAFVFGGRRSTTVPLVTEARDWVEGVYMAATMGSETTAAAAGQQGVVRRDPFAMLP CEEEEEEEECCCCCCEEEEEHHHHHHHHHEEEEEECCCCCHHHHCCCCCCEECCCCEECC FCGYNMSDYFSHWLALGARLEAAGATLPKIYCVNWFRKDAQGRFAWPGFGENMRVLQWML CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCEECCCCCCCHHHHHHHH ERLDGRGEGVEHALGVTPRYGDLHWDGLAFTPEQYQQVASVDRDAWRDELALHDELFDRL HHHCCCCCCCHHHHCCCCCCCCEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KARLPKALADTRARFEARLAG HHHCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TRSHAVEARHSVSLDVPDYVAHRGLIDWVARVAALTEPQRVVWCDGSQAEYDRLCEQMV CCCHHCCHHCEEECCCHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH AQGTLIRLDPRKRPNSFLALSDPSDVARVEDRTFICSESRDDAGPTNHWVAPAEMRATLD HCCCEEEECCCCCCCCEEEECCCCHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH GLFRGAMRGRTLYVVPFSMGPLGSPIAHVGVELSDSPYVVVNMRIMTRMGRDVYRVLGED HHHHHHHCCCEEEEEEECCCCCCCCHHHCCEEECCCCEEEEEEHHHHHHCHHHHHHHCCC GHFVPCVHSVGHPLAAGESDVRWPCNDTKYIVHFPETREIWSYGSGYGGNALLGKKCFAL CCEEEEHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCHHCCHHHHH RIASTMGRDQGWLAEHMLILGVTAPDGTKRHIAAAFPSACGKTNFAMLIPPAGFEGWRVT HHHHHCCCCCCHHHCEEEEEEEECCCCCCHHHHHHCHHHCCCCCEEEEECCCCCCCCEEE TIGDDIAWLKPGADGRLYAINPEAGYFGVAPGTGEKTNPNALATLRENVIFTNVALTDDG EECCCEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCHHHHHHHCCEEEEEEEEECCC DVWWEGLTDTPPAHLRDWQGKDWTPEIGRETGRKAAHPNARFTAPASQCPSIDADWDNPA CEEECCCCCCCCHHHCCCCCCCCCHHHHHHCCCCCCCCCCEEECCHHHCCCCCCCCCCCC GVAIDAFVFGGRRSTTVPLVTEARDWVEGVYMAATMGSETTAAAAGQQGVVRRDPFAMLP CEEEEEEEECCCCCCEEEEEHHHHHHHHHEEEEEECCCCCHHHHCCCCCCEECCCCEECC FCGYNMSDYFSHWLALGARLEAAGATLPKIYCVNWFRKDAQGRFAWPGFGENMRVLQWML CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCEECCCCCCCHHHHHHHH ERLDGRGEGVEHALGVTPRYGDLHWDGLAFTPEQYQQVASVDRDAWRDELALHDELFDRL HHHCCCCCCCHHHHCCCCCCCCEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KARLPKALADTRARFEARLAG HHHCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA