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The map label for this gene is ltrA [H]

Identifier: 238026739

GI number: 238026739

Start: 1203532

End: 1204488

Strand: Direct

Name: ltrA [H]

Synonym: bglu_1g10970

Alternate gene names: 238026739

Gene position: 1203532-1204488 (Clockwise)

Preceding gene: 238026737

Following gene: 238026741

Centisome position: 30.81

GC content: 74.09

Gene sequence:

>957_bases
ATGCCATCCGACCATATCGAAAGCCTCTGGGTCCATCTGCACTGGCTCACCGTGCTGGCCGACCAGGGCAGCTTCACGGG
CGCCGCGGCGCGGCTGGGCGTGAGCAAGGCGGCCGTCAGCCTGAAGATCGCCGAGCTCGAGCGCGCGGCCGGCGTGCCGC
TGGTGCAGCGCACCACGCGCAGCGTGCGGCTGACCGAGGCGGGCCTGCGGCTCGCCGACGAGACGCGTCCGCTCTACGAC
CGCATCTCGCAGAGCTTCTCGGGCGTGCGCGACACGGGCGCCCAGGTGCGCGGCAGCCTGCGCGTGACGGCGCCGGTGGC
GCTCGCGCGCCAGCAACTGGTGCCGCGGCTCGCCGAATTCCGGCGCCGCTACCCGGCGGTGCGCATCCAGCTCGACGTGT
CCGACCGGCTCGCCTCGCTCGCCACCGAGGGCTTCGACCTGGCGATCCGTCACAGCGCGGCGGCGCCCGAGACGCACGTG
GCCTGGAAGCTCTGCCGCACCCATTCGGTGATCGTCGCGGCGCCGGCCTATCTGGCCGTGCGCGGCGCGCCGGCGCATCC
GGACCAACTGGCCGGCCACGATTGCCTTTATTACCCGCGCAGCCATGACTCGGCGGCGTGGACCTTCGAGCGCGCCGGCA
CGCGGCGCCAGCGCGCCGCGCGCGTGACGGTGCCGATCGGCGGTCCGCTCGGCGCGAACAACAGCGAGGTGCTGCGCGAC
GCGGCGCTCGACGGGCTCGGCATCGCGCTGCTGCCCGATTTCTCGGCAGTGGCCGCGCTGCGCGCCGGCACGCTGGTGCG
CGTGCTGCCCGAATGGCGCCCGGTGGGCGTATTCGCCGAGCAGCTGCTGGCGGTGCGGCCCTACGCGACGCACGTGCCGC
GCGTGGTCCGGGCGTTCGTCGCCTATCTGCGCGAAGCGTTCGCGGACGGCTTCGACGAGGGCGTCAAGCCGCGCTGA

Upstream 100 bases:

>100_bases
GCCGATGCCAGTGTGGATGTCCGGCAGTGTAGGAGCCGCAAGCCGCCGTGGATATACACTGGCGGTGAAATCATTGTTTA
AATTTCTAAACGATCGAGCG

Downstream 100 bases:

>100_bases
CGGCGCGCGCGCCGGCCGCGCGCAGCGCCGTGGCGCGCCGCGGGCTTCGGCGAGGCCACCGCGCAGGTCATCACGCCGGG
CTGCCCCGCGTCGGCGGGCG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MPSDHIESLWVHLHWLTVLADQGSFTGAAARLGVSKAAVSLKIAELERAAGVPLVQRTTRSVRLTEAGLRLADETRPLYD
RISQSFSGVRDTGAQVRGSLRVTAPVALARQQLVPRLAEFRRRYPAVRIQLDVSDRLASLATEGFDLAIRHSAAAPETHV
AWKLCRTHSVIVAAPAYLAVRGAPAHPDQLAGHDCLYYPRSHDSAAWTFERAGTRRQRAARVTVPIGGPLGANNSEVLRD
AALDGLGIALLPDFSAVAALRAGTLVRVLPEWRPVGVFAEQLLAVRPYATHVPRVVRAFVAYLREAFADGFDEGVKPR

Sequences:

>Translated_318_residues
MPSDHIESLWVHLHWLTVLADQGSFTGAAARLGVSKAAVSLKIAELERAAGVPLVQRTTRSVRLTEAGLRLADETRPLYD
RISQSFSGVRDTGAQVRGSLRVTAPVALARQQLVPRLAEFRRRYPAVRIQLDVSDRLASLATEGFDLAIRHSAAAPETHV
AWKLCRTHSVIVAAPAYLAVRGAPAHPDQLAGHDCLYYPRSHDSAAWTFERAGTRRQRAARVTVPIGGPLGANNSEVLRD
AALDGLGIALLPDFSAVAALRAGTLVRVLPEWRPVGVFAEQLLAVRPYATHVPRVVRAFVAYLREAFADGFDEGVKPR
>Mature_317_residues
PSDHIESLWVHLHWLTVLADQGSFTGAAARLGVSKAAVSLKIAELERAAGVPLVQRTTRSVRLTEAGLRLADETRPLYDR
ISQSFSGVRDTGAQVRGSLRVTAPVALARQQLVPRLAEFRRRYPAVRIQLDVSDRLASLATEGFDLAIRHSAAAPETHVA
WKLCRTHSVIVAAPAYLAVRGAPAHPDQLAGHDCLYYPRSHDSAAWTFERAGTRRQRAARVTVPIGGPLGANNSEVLRDA
ALDGLGIALLPDFSAVAALRAGTLVRVLPEWRPVGVFAEQLLAVRPYATHVPRVVRAFVAYLREAFADGFDEGVKPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081978, Length=298, Percent_Identity=32.5503355704698, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1789440, Length=260, Percent_Identity=28.8461538461538, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI145693193, Length=302, Percent_Identity=31.1258278145695, Blast_Score=127, Evalue=9e-31,
Organism=Escherichia coli, GI1786401, Length=299, Percent_Identity=30.1003344481605, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1787589, Length=265, Percent_Identity=31.3207547169811, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1787128, Length=297, Percent_Identity=29.96632996633, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1788706, Length=301, Percent_Identity=26.9102990033223, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1789173, Length=243, Percent_Identity=28.8065843621399, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1789639, Length=264, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1790011, Length=271, Percent_Identity=25.830258302583, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI157672245, Length=121, Percent_Identity=33.8842975206612, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786448, Length=244, Percent_Identity=27.8688524590164, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1788748, Length=227, Percent_Identity=29.0748898678414, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI145693105, Length=117, Percent_Identity=31.6239316239316, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786713, Length=270, Percent_Identity=28.8888888888889, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787879, Length=171, Percent_Identity=29.8245614035088, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790208, Length=164, Percent_Identity=32.9268292682927, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34571; Mature: 34440

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSDHIESLWVHLHWLTVLADQGSFTGAAARLGVSKAAVSLKIAELERAAGVPLVQRTTR
CCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHEEHHHHHHHHCCCCHHHHCCH
SVRLTEAGLRLADETRPLYDRISQSFSGVRDTGAQVRGSLRVTAPVALARQQLVPRLAEF
HEEEEHHHCCHHHCCCHHHHHHHHHHCCHHHCCHHHHCCEEEEHHHHHHHHHHHHHHHHH
RRRYPAVRIQLDVSDRLASLATEGFDLAIRHSAAAPETHVAWKLCRTHSVIVAAPAYLAV
HHHCCEEEEEEEHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCEEEECCHHEEE
RGAPAHPDQLAGHDCLYYPRSHDSAAWTFERAGTRRQRAARVTVPIGGPLGANNSEVLRD
CCCCCCCHHHCCCCEEECCCCCCCCEEEHHHCCCHHHHCEEEEEECCCCCCCCCHHHHHH
AALDGLGIALLPDFSAVAALRAGTLVRVLPEWRPVGVFAEQLLAVRPYATHVPRVVRAFV
HHHCCCCEEECCCHHHHHHHHHCHHEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
AYLREAFADGFDEGVKPR
HHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PSDHIESLWVHLHWLTVLADQGSFTGAAARLGVSKAAVSLKIAELERAAGVPLVQRTTR
CCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHEEHHHHHHHHCCCCHHHHCCH
SVRLTEAGLRLADETRPLYDRISQSFSGVRDTGAQVRGSLRVTAPVALARQQLVPRLAEF
HEEEEHHHCCHHHCCCHHHHHHHHHHCCHHHCCHHHHCCEEEEHHHHHHHHHHHHHHHHH
RRRYPAVRIQLDVSDRLASLATEGFDLAIRHSAAAPETHVAWKLCRTHSVIVAAPAYLAV
HHHCCEEEEEEEHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCEEEECCHHEEE
RGAPAHPDQLAGHDCLYYPRSHDSAAWTFERAGTRRQRAARVTVPIGGPLGANNSEVLRD
CCCCCCCHHHCCCCEEECCCCCCCCEEEHHHCCCHHHHCEEEEEECCCCCCCCCHHHHHH
AALDGLGIALLPDFSAVAALRAGTLVRVLPEWRPVGVFAEQLLAVRPYATHVPRVVRAFV
HHHCCCCEEECCCHHHHHHHHHCHHEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
AYLREAFADGFDEGVKPR
HHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8748036 [H]