| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ywtG [H]
Identifier: 238026726
GI number: 238026726
Start: 1185888
End: 1187390
Strand: Direct
Name: ywtG [H]
Synonym: bglu_1g10830
Alternate gene names: 238026726
Gene position: 1185888-1187390 (Clockwise)
Preceding gene: 238026725
Following gene: 238026727
Centisome position: 30.36
GC content: 72.79
Gene sequence:
>1503_bases ATGTCCACCGTCATCCTCGCTACCGCTTCACCCGCCTCGTCCCCGCCCGGCCCGGCGGGCGCGCCGCTCACGCCGCTCGT GATCCGCTCGGCGCGCGACGTCGCGCGGCTCGCCAACGAAGGCGCCGCCGCGGGCGGCCAGGCGCGCGCGGTGGTCGCGA TCGCGCTGGGCGGCGTGTTCCTCGACGCCTACGATCTCACCTCGCTCGCCTATGGCGTCAAGGACATCGCGCGCGAGTTC GCGCTGAGTCCGGTGCAGGTCGGGCTGGTGTCGTCGGCGATCACGTTCGGCGCGCTGGTGGGCGCGTTCGTCGGCGGCTA CCTGACCGACCGGATCGGCCGCTACCGCGTGTTCATGGCCGACATGGTGTTCTTCGTGGTGGCGGCGATCGCGGCCGGCC TCGCGCCCAACGCCTGGGTGCTGGCGATCGCGCGTTTCGTGATGGGGCTCGGCGTCGGGCTCGACCTGCCGGTGGCGATG GCCTTCCTCGCCGAGTTCTCGCGCGTCTCGGGGCGCGGCAACAAGGCGGCCAGCATCGCCGCCTGGTGCCCGGCCTGGTA CGCGGCCACCAGCGCCTGCTATCTGCTGATCCTCGCGCTCTACGCGCTGCTGCCCGACGCGCAGACCGGCTGGCTGTGGC GCATCGTGCTGGCGTTCGGCGCGGTGCCGGCGCTCGTGATCATCGCGGTGCGCAGCCGCTACATCAGCGAATCGCCGGTG TGGGCCGCCAACCAGGGCGACCTGGCCGGCGCGGCGCGCATCCTGAAGCGCTCGCACGGGATCGACGCGGTGGTGGCCGA GGGCGCCGACCAGGCCGCGGCAATCGACGCGGCCCGCCCCGCGCGCGCCTCGTGGCGCAGCTACGCGGCCCTGTTCGGCG CGCGCTATCGCAGGCGCACGATCCTCTCGCTGGTGATCGGCGGCGCCTCGTCGTTCGGCTACAACGCGATCGTCTACGGG CTGCCGGTGATTCTCGCGAGCTTCCTGAAGCAGGGGCCGCTCACCACCATCGTCGCCGCGCTGGCGCTGAACCTGCTGTT CGCGTTCGTGGGCGGGCTGATCGGGGTGCGCACGGCCGCTACCGTCGGCGCCTGGAAGATGACCACGGCCGGCGTGGCGC TGCAGTTCGTCGCGCTGCTGGGGCTCGCGCTGATCGGCCGGCCAAGCGGCGCGGTGCCGGTGGTCGCGGCGCTGCTGCTG CTCGGCGCCTATCTGTTCGGGCAGGGTTTCGGCCCCGGCTCGCACTCGATGACCTACGCGTCGCTGAGCTATCCGACCTC GCTGCGCGGCGTCGGCGTGGGTTTCACGCAGACCGTCGCGCGCGGGTTGTCGACCGTTTCGCTGTTCCTGTTTCCGGTGC TGGCCGCCGCGCTCGGCACGCGCGTGTTCTGGCTGATCGCGCTGGCGCCGCTCGCCTCGCTCACGGCGCTGCTGTGGCTG CGCTGGGAGCCGTCGGGCTACGACGTCGACGCCGAGGATTATCGCGACGCGAGCCCGGCTTGA
Upstream 100 bases:
>100_bases CCGTGGCGATATGGATCGACGAAATCGGCATTTGTGGCGGCGTGGGCCGTCGCTATAGTCGGCTCCTGCTCATCGTCATG CCGCTCGCGCGGCCCGCATC
Downstream 100 bases:
>100_bases GGCGGCCGCGGGCGGCGTCGCCCCGCGCCGCGGCGGCCTGACGGGCGCGGGCGCGGGCGGTCGCGACCGGTCCGCACGAT GCTATCGGCGCCATTGGTTT
Product: major facilitator superfamily transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MSTVILATASPASSPPGPAGAPLTPLVIRSARDVARLANEGAAAGGQARAVVAIALGGVFLDAYDLTSLAYGVKDIAREF ALSPVQVGLVSSAITFGALVGAFVGGYLTDRIGRYRVFMADMVFFVVAAIAAGLAPNAWVLAIARFVMGLGVGLDLPVAM AFLAEFSRVSGRGNKAASIAAWCPAWYAATSACYLLILALYALLPDAQTGWLWRIVLAFGAVPALVIIAVRSRYISESPV WAANQGDLAGAARILKRSHGIDAVVAEGADQAAAIDAARPARASWRSYAALFGARYRRRTILSLVIGGASSFGYNAIVYG LPVILASFLKQGPLTTIVAALALNLLFAFVGGLIGVRTAATVGAWKMTTAGVALQFVALLGLALIGRPSGAVPVVAALLL LGAYLFGQGFGPGSHSMTYASLSYPTSLRGVGVGFTQTVARGLSTVSLFLFPVLAAALGTRVFWLIALAPLASLTALLWL RWEPSGYDVDAEDYRDASPA
Sequences:
>Translated_500_residues MSTVILATASPASSPPGPAGAPLTPLVIRSARDVARLANEGAAAGGQARAVVAIALGGVFLDAYDLTSLAYGVKDIAREF ALSPVQVGLVSSAITFGALVGAFVGGYLTDRIGRYRVFMADMVFFVVAAIAAGLAPNAWVLAIARFVMGLGVGLDLPVAM AFLAEFSRVSGRGNKAASIAAWCPAWYAATSACYLLILALYALLPDAQTGWLWRIVLAFGAVPALVIIAVRSRYISESPV WAANQGDLAGAARILKRSHGIDAVVAEGADQAAAIDAARPARASWRSYAALFGARYRRRTILSLVIGGASSFGYNAIVYG LPVILASFLKQGPLTTIVAALALNLLFAFVGGLIGVRTAATVGAWKMTTAGVALQFVALLGLALIGRPSGAVPVVAALLL LGAYLFGQGFGPGSHSMTYASLSYPTSLRGVGVGFTQTVARGLSTVSLFLFPVLAAALGTRVFWLIALAPLASLTALLWL RWEPSGYDVDAEDYRDASPA >Mature_499_residues STVILATASPASSPPGPAGAPLTPLVIRSARDVARLANEGAAAGGQARAVVAIALGGVFLDAYDLTSLAYGVKDIAREFA LSPVQVGLVSSAITFGALVGAFVGGYLTDRIGRYRVFMADMVFFVVAAIAAGLAPNAWVLAIARFVMGLGVGLDLPVAMA FLAEFSRVSGRGNKAASIAAWCPAWYAATSACYLLILALYALLPDAQTGWLWRIVLAFGAVPALVIIAVRSRYISESPVW AANQGDLAGAARILKRSHGIDAVVAEGADQAAAIDAARPARASWRSYAALFGARYRRRTILSLVIGGASSFGYNAIVYGL PVILASFLKQGPLTTIVAALALNLLFAFVGGLIGVRTAATVGAWKMTTAGVALQFVALLGLALIGRPSGAVPVVAALLLL GAYLFGQGFGPGSHSMTYASLSYPTSLRGVGVGFTQTVARGLSTVSLFLFPVLAAALGTRVFWLIALAPLASLTALLWLR WEPSGYDVDAEDYRDASPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786229, Length=415, Percent_Identity=24.8192771084337, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI87082159, Length=413, Percent_Identity=25.4237288135593, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1788068, Length=241, Percent_Identity=25.3112033195021, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1788074, Length=263, Percent_Identity=25.4752851711027, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1789207, Length=338, Percent_Identity=26.9230769230769, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI87081723, Length=186, Percent_Identity=30.1075268817204, Blast_Score=62, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6320705, Length=354, Percent_Identity=24.8587570621469, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323512, Length=465, Percent_Identity=23.6559139784946, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324469, Length=228, Percent_Identity=22.8070175438596, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI24644448, Length=399, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI24644446, Length=399, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR003663 - InterPro: IPR005829 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 51698; Mature: 51567
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVILATASPASSPPGPAGAPLTPLVIRSARDVARLANEGAAAGGQARAVVAIALGGVF CCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEHHHHHHHHH LDAYDLTSLAYGVKDIAREFALSPVQVGLVSSAITFGALVGAFVGGYLTDRIGRYRVFMA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DMVFFVVAAIAAGLAPNAWVLAIARFVMGLGVGLDLPVAMAFLAEFSRVSGRGNKAASIA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHH AWCPAWYAATSACYLLILALYALLPDAQTGWLWRIVLAFGAVPALVIIAVRSRYISESPV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WAANQGDLAGAARILKRSHGIDAVVAEGADQAAAIDAARPARASWRSYAALFGARYRRRT CCCCCCCHHHHHHHHHHHCCCCCEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH ILSLVIGGASSFGYNAIVYGLPVILASFLKQGPLTTIVAALALNLLFAFVGGLIGVRTAA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TVGAWKMTTAGVALQFVALLGLALIGRPSGAVPVVAALLLLGAYLFGQGFGPGSHSMTYA HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEE SLSYPTSLRGVGVGFTQTVARGLSTVSLFLFPVLAAALGTRVFWLIALAPLASLTALLWL EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE RWEPSGYDVDAEDYRDASPA EECCCCCCCCHHHCCCCCCC >Mature Secondary Structure STVILATASPASSPPGPAGAPLTPLVIRSARDVARLANEGAAAGGQARAVVAIALGGVF CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEHHHHHHHHH LDAYDLTSLAYGVKDIAREFALSPVQVGLVSSAITFGALVGAFVGGYLTDRIGRYRVFMA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DMVFFVVAAIAAGLAPNAWVLAIARFVMGLGVGLDLPVAMAFLAEFSRVSGRGNKAASIA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHH AWCPAWYAATSACYLLILALYALLPDAQTGWLWRIVLAFGAVPALVIIAVRSRYISESPV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WAANQGDLAGAARILKRSHGIDAVVAEGADQAAAIDAARPARASWRSYAALFGARYRRRT CCCCCCCHHHHHHHHHHHCCCCCEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH ILSLVIGGASSFGYNAIVYGLPVILASFLKQGPLTTIVAALALNLLFAFVGGLIGVRTAA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TVGAWKMTTAGVALQFVALLGLALIGRPSGAVPVVAALLLLGAYLFGQGFGPGSHSMTYA HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEE SLSYPTSLRGVGVGFTQTVARGLSTVSLFLFPVLAAALGTRVFWLIALAPLASLTALLWL EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE RWEPSGYDVDAEDYRDASPA EECCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]