Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is yuxL [H]

Identifier: 238025533

GI number: 238025533

Start: 2765056

End: 2766924

Strand: Reverse

Name: yuxL [H]

Synonym: bglu_2g22290

Alternate gene names: 238025533

Gene position: 2766924-2765056 (Counterclockwise)

Preceding gene: 238025534

Following gene: 238025531

Centisome position: 97.86

GC content: 73.52

Gene sequence:

>1869_bases
ATGCCAGAGAATCCCGCCGACTCAAGCCTTGAGCCCGTCCGCGACCACGGCGCGCCGCTCACGGCCGCAGCCGCCGTCGC
CGCCGGCCGCGACTTCATCGAACTGAGCGCCGGCCCGTCCGGCGTGTTCTGGACCGAATACGACCCCGCCGACGCGATGT
GCCGGATCTGGCGTGCGCGCCACGGCTCGATCGAGCGCGTGAGCCCGGACGGCTTCAGCGCGCGCGGGCGCGTCTACGAG
TACGGCGGCGGGGCGTTCTGCGTGGCGGGCGACTGGGTGGCGTTCGTCAACGAGCGCGACCAGCGCATCTACCGCTTCTC
CCCCGGCAGCGCCGCCGCGCCCGAGCCGCTGAGCGCCGAGGGTTTGCGCTACGGCGACCTGCGCGCCTCGCACGGGCGGA
TCCTGGCCGTGGAGCAGGACGGCGAGACGCACCGGCTCGTGTCGATCGGCCTGCACGACGGCAGGCGCGAGCTGCTCGCC
GAGGGCGCCGATTTCTACGCGTCGCCGGTATCGAGCGCCGACGGTGCGCGGCTCGCCTGGATCGAATGGCAGCATCCGCA
CCAGCCGTGGACGGCCACCCAGCTCGTGCTGCGCGAGACCGGGCCGGACGGGCGGCCGGCCGCGCCGCGCGTGGTGGCCG
GGGCGGCGCACGACGAGGCGCTGCAGCAGCCGGCCTTCGATCGCGACGGCCGGCTGGTCTGCCTGGGCGATCGCGGCAAC
TTCTGGCAGCCGTGGCGGCTCGAGGGCGAGCGCTTGGTGCCCTTGCCGGCCGCGGCCGGCGACCATGCCGCCGCGCCGTG
GCAGCTCGGCGCCCGCAGCTGGCTGCCGCTCGACGACGGCACCGTGTTCGCGAGCTGGTTCGACGAGGGCTGGGGCCGGC
TCGGCGTCTACGCGGCCGACGGCACGCTCACGCCGCTCGCGCCCGGCTACACCCTGTTTCACCATCTCGCCGCCGACGCG
ACGCATCTGTACTGCGTGGCCGCCTCGCCCAACTGCCCGGCCGCGATCCTCGCGATCGACCGGCGCGATCATCGCGTCAG
CGTGCTGCGGGAGGTGGCCGCGTCGATTCCGGCCGAGCGCATCACGCAGCCGCGCGCGCTGCGCTTCCCGAGCGGCGACG
GCCAGGCCTATGGCTACCTGTACCTGCCCGATGCGGCGACCGAGGCCGGCGCGGGCGAGCCGCCGCCGGTGATCGTGTTC
GCGCACGGCGGCCCGACCGCGGCGCTGTATCCGGTGTTCAGCCCGCGCCACGAGTACTGGGTGCAGCGCGGCTTCGCGAT
CGTGCTGCTCAACTATCGCGGCAGCACCGGCTATGGCCGCGCGTTCCGGCAGGCGCTGCACCTGGCCTGGGGCGTGGCCG
ACGTCGACGACGCCTGCGCCGTGGTCGCCCACCTGGCCGGGCAGGGCCTCGTCGATGCGCGGCGCGCGTTCATCCGCGGC
GGCAGCGCGGGCGGCTTTACCGTGCTCAACGCGCTGGCGTTGCGCGACGTGTTCCGTGGCGGCGCGAGCCTCTACGGCGT
CAGCGACCCGTTGCAGCTCGACGCCCATACCCACAAGTTCGAGGCACGCTACCTGCGCTGGCTGATCGGCGATCCGGTGG
CCGACCGAGAGCGCTATCTGGCGCGCACGCCGCTCGCGCATGCCGATGCGATCCGCGCGCCGGTGATCTTCTTCCAGGGC
GAGCTCGACGTCGTGGTGACGCCGGACCAGACGCGCAGCATGGTCGCCGCGCTCAAGGCCAACGGCGTGCCCAACGAGGT
CCATTACTACGCCGACGAGCGGCACGGCTTTCGCCACGCCGCGAACCAGGCCCATGCGCTCGAAGCCGAGTACGCGTTCT
ACCGGCGCATCCTGGACGGGGAAATCTGA

Upstream 100 bases:

>100_bases
TGCAGCAAGTCGCCCTATCACCCGGTGATCCTGCGCGCGCGCGACGCAGCCGTGCCGGCCCGGCCCACCGTTTCCACCAC
GCATCCGCTGATCTTCCGCA

Downstream 100 bases:

>100_bases
CCGGAGCGGAGGCGGCCGCGATCCCGGGCGATCCGGCCTGGGCGCGCGGCGCCGCCGCCATGAAAAAAGGCTGCCCGGGG
GCAGCCTTTCGCGTCGGCGC

Product: dipeptidyl aminopeptidase/acylaminoacyl-peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 622; Mature: 621

Protein sequence:

>622_residues
MPENPADSSLEPVRDHGAPLTAAAAVAAGRDFIELSAGPSGVFWTEYDPADAMCRIWRARHGSIERVSPDGFSARGRVYE
YGGGAFCVAGDWVAFVNERDQRIYRFSPGSAAAPEPLSAEGLRYGDLRASHGRILAVEQDGETHRLVSIGLHDGRRELLA
EGADFYASPVSSADGARLAWIEWQHPHQPWTATQLVLRETGPDGRPAAPRVVAGAAHDEALQQPAFDRDGRLVCLGDRGN
FWQPWRLEGERLVPLPAAAGDHAAAPWQLGARSWLPLDDGTVFASWFDEGWGRLGVYAADGTLTPLAPGYTLFHHLAADA
THLYCVAASPNCPAAILAIDRRDHRVSVLREVAASIPAERITQPRALRFPSGDGQAYGYLYLPDAATEAGAGEPPPVIVF
AHGGPTAALYPVFSPRHEYWVQRGFAIVLLNYRGSTGYGRAFRQALHLAWGVADVDDACAVVAHLAGQGLVDARRAFIRG
GSAGGFTVLNALALRDVFRGGASLYGVSDPLQLDAHTHKFEARYLRWLIGDPVADRERYLARTPLAHADAIRAPVIFFQG
ELDVVVTPDQTRSMVAALKANGVPNEVHYYADERHGFRHAANQAHALEAEYAFYRRILDGEI

Sequences:

>Translated_622_residues
MPENPADSSLEPVRDHGAPLTAAAAVAAGRDFIELSAGPSGVFWTEYDPADAMCRIWRARHGSIERVSPDGFSARGRVYE
YGGGAFCVAGDWVAFVNERDQRIYRFSPGSAAAPEPLSAEGLRYGDLRASHGRILAVEQDGETHRLVSIGLHDGRRELLA
EGADFYASPVSSADGARLAWIEWQHPHQPWTATQLVLRETGPDGRPAAPRVVAGAAHDEALQQPAFDRDGRLVCLGDRGN
FWQPWRLEGERLVPLPAAAGDHAAAPWQLGARSWLPLDDGTVFASWFDEGWGRLGVYAADGTLTPLAPGYTLFHHLAADA
THLYCVAASPNCPAAILAIDRRDHRVSVLREVAASIPAERITQPRALRFPSGDGQAYGYLYLPDAATEAGAGEPPPVIVF
AHGGPTAALYPVFSPRHEYWVQRGFAIVLLNYRGSTGYGRAFRQALHLAWGVADVDDACAVVAHLAGQGLVDARRAFIRG
GSAGGFTVLNALALRDVFRGGASLYGVSDPLQLDAHTHKFEARYLRWLIGDPVADRERYLARTPLAHADAIRAPVIFFQG
ELDVVVTPDQTRSMVAALKANGVPNEVHYYADERHGFRHAANQAHALEAEYAFYRRILDGEI
>Mature_621_residues
PENPADSSLEPVRDHGAPLTAAAAVAAGRDFIELSAGPSGVFWTEYDPADAMCRIWRARHGSIERVSPDGFSARGRVYEY
GGGAFCVAGDWVAFVNERDQRIYRFSPGSAAAPEPLSAEGLRYGDLRASHGRILAVEQDGETHRLVSIGLHDGRRELLAE
GADFYASPVSSADGARLAWIEWQHPHQPWTATQLVLRETGPDGRPAAPRVVAGAAHDEALQQPAFDRDGRLVCLGDRGNF
WQPWRLEGERLVPLPAAAGDHAAAPWQLGARSWLPLDDGTVFASWFDEGWGRLGVYAADGTLTPLAPGYTLFHHLAADAT
HLYCVAASPNCPAAILAIDRRDHRVSVLREVAASIPAERITQPRALRFPSGDGQAYGYLYLPDAATEAGAGEPPPVIVFA
HGGPTAALYPVFSPRHEYWVQRGFAIVLLNYRGSTGYGRAFRQALHLAWGVADVDDACAVVAHLAGQGLVDARRAFIRGG
SAGGFTVLNALALRDVFRGGASLYGVSDPLQLDAHTHKFEARYLRWLIGDPVADRERYLARTPLAHADAIRAPVIFFQGE
LDVVVTPDQTRSMVAALKANGVPNEVHYYADERHGFRHAANQAHALEAEYAFYRRILDGEI

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Homo sapiens, GI18450280, Length=291, Percent_Identity=25.4295532646048, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI37577089, Length=298, Percent_Identity=25.1677852348993, Blast_Score=70, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17552908, Length=614, Percent_Identity=29.9674267100977, Blast_Score=262, Evalue=4e-70,
Organism=Caenorhabditis elegans, GI25144540, Length=235, Percent_Identity=29.3617021276596, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI25144537, Length=235, Percent_Identity=29.3617021276596, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI25149159, Length=368, Percent_Identity=25.5434782608696, Blast_Score=79, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI25144543, Length=121, Percent_Identity=32.2314049586777, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 67526; Mature: 67395

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPENPADSSLEPVRDHGAPLTAAAAVAAGRDFIELSAGPSGVFWTEYDPADAMCRIWRAR
CCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCEEEECCCCCCEEEECCCCHHHHHHHHHHC
HGSIERVSPDGFSARGRVYEYGGGAFCVAGDWVAFVNERDQRIYRFSPGSAAAPEPLSAE
CCCCEEECCCCCCCCCEEEEECCCEEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCCC
GLRYGDLRASHGRILAVEQDGETHRLVSIGLHDGRRELLAEGADFYASPVSSADGARLAW
CCEECCCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHCCCCHHCCCCCCCCCCEEEE
IEWQHPHQPWTATQLVLRETGPDGRPAAPRVVAGAAHDEALQQPAFDRDGRLVCLGDRGN
EEECCCCCCCHHHEEEEEECCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCEEEECCCCC
FWQPWRLEGERLVPLPAAAGDHAAAPWQLGARSWLPLDDGTVFASWFDEGWGRLGVYAAD
CCCCEECCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEEHHCCCCEEEEEEEC
GTLTPLAPGYTLFHHLAADATHLYCVAASPNCPAAILAIDRRDHRVSVLREVAASIPAER
CCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCHHH
ITQPRALRFPSGDGQAYGYLYLPDAATEAGAGEPPPVIVFAHGGPTAALYPVFSPRHEYW
CCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHHH
VQRGFAIVLLNYRGSTGYGRAFRQALHLAWGVADVDDACAVVAHLAGQGLVDARRAFIRG
HHCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHCC
GSAGGFTVLNALALRDVFRGGASLYGVSDPLQLDAHTHKFEARYLRWLIGDPVADRERYL
CCCCHHHHHHHHHHHHHHHCCCEEEECCCCEEECCCHHHHHHHHHHHHHCCCCCHHHHHH
ARTPLAHADAIRAPVIFFQGELDVVVTPDQTRSMVAALKANGVPNEVHYYADERHGFRHA
HHCCCCHHHHHCCCEEEEECCEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHH
ANQAHALEAEYAFYRRILDGEI
CCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PENPADSSLEPVRDHGAPLTAAAAVAAGRDFIELSAGPSGVFWTEYDPADAMCRIWRAR
CCCCCCCCCCHHHHCCCCHHHHHHHHCCCCEEEECCCCCCEEEECCCCHHHHHHHHHHC
HGSIERVSPDGFSARGRVYEYGGGAFCVAGDWVAFVNERDQRIYRFSPGSAAAPEPLSAE
CCCCEEECCCCCCCCCEEEEECCCEEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCCC
GLRYGDLRASHGRILAVEQDGETHRLVSIGLHDGRRELLAEGADFYASPVSSADGARLAW
CCEECCCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHCCCCHHCCCCCCCCCCEEEE
IEWQHPHQPWTATQLVLRETGPDGRPAAPRVVAGAAHDEALQQPAFDRDGRLVCLGDRGN
EEECCCCCCCHHHEEEEEECCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCEEEECCCCC
FWQPWRLEGERLVPLPAAAGDHAAAPWQLGARSWLPLDDGTVFASWFDEGWGRLGVYAAD
CCCCEECCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEEHHCCCCEEEEEEEC
GTLTPLAPGYTLFHHLAADATHLYCVAASPNCPAAILAIDRRDHRVSVLREVAASIPAER
CCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCHHH
ITQPRALRFPSGDGQAYGYLYLPDAATEAGAGEPPPVIVFAHGGPTAALYPVFSPRHEYW
CCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHHH
VQRGFAIVLLNYRGSTGYGRAFRQALHLAWGVADVDDACAVVAHLAGQGLVDARRAFIRG
HHCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHCC
GSAGGFTVLNALALRDVFRGGASLYGVSDPLQLDAHTHKFEARYLRWLIGDPVADRERYL
CCCCHHHHHHHHHHHHHHHCCCEEEECCCCEEECCCHHHHHHHHHHHHHCCCCCHHHHHH
ARTPLAHADAIRAPVIFFQGELDVVVTPDQTRSMVAALKANGVPNEVHYYADERHGFRHA
HHCCCCHHHHHCCCEEEEECCEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHH
ANQAHALEAEYAFYRRILDGEI
CCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]