Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is yfiQ [H]
Identifier: 238025505
GI number: 238025505
Start: 2731182
End: 2733572
Strand: Reverse
Name: yfiQ [H]
Synonym: bglu_2g22010
Alternate gene names: 238025505
Gene position: 2733572-2731182 (Counterclockwise)
Preceding gene: 238025506
Following gene: 238025503
Centisome position: 96.68
GC content: 72.56
Gene sequence:
>2391_bases GTGACCGTCCGTAATCTCGATGCGTTGTTTCAGCCGAAATCCGTGGCCGTGGTGGGCGCGTCCCGGCGCGCCGGCAGCCT CGGCGCGATCGTGTGGGCTCGCGTGCTGGACGGCGGATTTGCCGGGCCGATCTGGCCCGTCAATCCCAAGTACGACGAAC TGAACGGACATCCGGTGTTCGCGCGCGTGGCGCGGCTGCCGCAGCCACCGTCGGTGGCGCTCGTCTGCACCCCGCCCGCC AGCTGGCCCGGCATCGTGCGCCAGCTCGGCGAGCTGGGCGCGCGCTGCGCGATCCTGGTCGGCGAGGCGCGCACGGCCGG CGAGCGCGCCTCGGTCGAGCGCGCGCTCGCCGCAGCGAAGCCGTATCTGCTGCGCATCGTCGGGCCCGGCAGCCTCGGCG TGGTGACGCCGCAGCTGAATGCGCACTTCGGCGCGCCGGCCTGCTGCGTGAGCGCGGGCGGCGTCGCCTGGGTCTCGCAG TCGAACGCGCTGACGAATGCCGCGCTCGGCTGGGCAAAGGCACGCGGGCTCGGTTTCTCGCATGCGGTCGCGCTCGGCGA CGAGGCCGACGTCGATGCGGGCGACGTGCTCGACTACCTCGCGAGCGATCCCGATACGCGCGCGATCCTGCTCGAACTCG ACAGCATCAGGTCGGCGCGCAAGTTCATGTCGGCCGCGCGCGCGGCGGCGCGCAACAAGCCGGTGCTGGCGCTGCACACG GGCCGCACCGATGCCGGCGACGCGTTGTATACGGCCGCGTTCCAGCAGGCGGGCATGGTGCGCGTCGATGCGCTCGACGA TCTGCTCGACGAGATCGAAACGCTCGGCGTCGGGCGCGTCACGGCGAGCGACGCGGTCACCGTCGTCACCAGCGATGCCG GCGTCGCGCGGCTCGCCGTCGATGCGCTGGCCGCCGTCGGCGACATGCGGCTCGCACCGTGGCCGTCGGCCGCCACGGCC GCGTTGGCCACCGTGCTGCCGCTGCCGCCCGGCATCGAGGCCGGCAATCCGCTGCTGCTCGGCGACAACGTGCGGCCGGA AGATTTCGGCGCCGTCGTGCGCGCGCTCGGCAAGCTGGGCGGCACCGGCACGCTGTTCGTTGTCCACGCAACTTCCCACA ATGCGCCGGTCGAGGCGGTGGCGCGCGAACTGATCGAGGCGAAGCGCGCCTCGTCGCACGGCGTCGTGGCCTGCTTTTTC GGCGGCGTCGACGCGCTCACGCGCGATGCGCTGCATGCGCAGGGCATTCCCGTGCACACCACGCCGCAGCGGCTCGCACG CGCCTACGCGCGGCTCGTCGAGTACCGGCATGGCCGCGAGCTGCTGATGCAGACGCCGGAAGGCCTGCCGCCCGAGCCGC CCGCCGCGGTGGCGCGTGCGCGGGACGAGGCGCGCGAGGCCGCCGCGCGCGGCCCGACCAAGCTCGACGGCGCGGGCGCG GCGGGCTGGCTCGCGCATTTCGGATTGCAGCCGTTCACGCCCGGCGAGCCGGGCGGTGCCGAGTCGGCCGACACGGGCAG CGGCGTGATCGTCGAAATGACGGTCGACATGTTCGACGATCCGAACTTCGGCCCGGTGTTCCGCTACGCGGTGCCGGCCG CGGACGGCATCTCGGCGCCGCTCGTCGTGTACGGGCTGCCGCCGTTCAATACCGTGCTGGCCCGCGCGGTCGTGAGGCGT TCGCCCTATGCACGCCGCGCGGCGCCCGAGCCGCTGCTCGACGTGCTGACGGCGCTGTCGCTGGCGGTATGCGAGGTGCG GGAGCTCGTGTCGCTGTCGTTGGTGCTGCGCGTGCTGCCGCGCCGCGTCGTATTTCGCGATGCGCGCCTGCGCTTCGCGG CGGGCCGCAGCCGGCTCGCGATCATGCCTTATCCGCGGCACCTCGAACAGCGCGTCGATTGGCACGGCACCACGATGACG GTGCGGCCGATCCGGCCCGAGGACGAGGCCGCGCATACGGCGCTGCTCGACGCGATGACGCCCGATGATCTGCGCATGCG CTTCTTCGGCGCGATCCGCAGCTTCGATCATTCCCAGGTCGCGCGGATGACGCAGATCGACTACGACCGGGAGATGGCCC TGATCGCCACCGTCGATGATCAGGACGGCAAGCGGCAGACGCTCGGCGTCGTGCGGGCCGTGGCCGACCCCGACAACGAG ACGGCCGAGTTCGCGATCGCGATCCGCGCGGACCAGAAGGGCAAGGGACTCGGGCGGCTGCTGATGGCGCGCATCATCGA CTACGCGCGCTCGCGCGGCACGCAGTGGCTCGTCGGCGAGGCGCTGCGCGAGAACGGCGCCATGATCGGCCTCGCGCGCG CCTCGGGGTTCACCGTCGCGTCGACCGCGGAGCCCGGTGTCGTCGGGTTCCGCTTGAAGCTGCAAGCGTGA
Upstream 100 bases:
>100_bases AGCTGCACACCCGGCCGTTTGGCCTATAGGCAGGCTCCGGGCGTTCACCTATCCTACCGCTGACTGTCGCGTTTCCCGCG TCATGCCGAAGGAGCCCGCC
Downstream 100 bases:
>100_bases ATGCGCGGCGTGCCGCGGCGCGTGGAGATCGCAGGCGCGCCCGGCAGGCCGTCATGGCGCACGGCGGCGATCGGCGCGAA GGTGAGCCGATACGGGATCG
Product: GNAT family acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 796; Mature: 795
Protein sequence:
>796_residues MTVRNLDALFQPKSVAVVGASRRAGSLGAIVWARVLDGGFAGPIWPVNPKYDELNGHPVFARVARLPQPPSVALVCTPPA SWPGIVRQLGELGARCAILVGEARTAGERASVERALAAAKPYLLRIVGPGSLGVVTPQLNAHFGAPACCVSAGGVAWVSQ SNALTNAALGWAKARGLGFSHAVALGDEADVDAGDVLDYLASDPDTRAILLELDSIRSARKFMSAARAAARNKPVLALHT GRTDAGDALYTAAFQQAGMVRVDALDDLLDEIETLGVGRVTASDAVTVVTSDAGVARLAVDALAAVGDMRLAPWPSAATA ALATVLPLPPGIEAGNPLLLGDNVRPEDFGAVVRALGKLGGTGTLFVVHATSHNAPVEAVARELIEAKRASSHGVVACFF GGVDALTRDALHAQGIPVHTTPQRLARAYARLVEYRHGRELLMQTPEGLPPEPPAAVARARDEAREAAARGPTKLDGAGA AGWLAHFGLQPFTPGEPGGAESADTGSGVIVEMTVDMFDDPNFGPVFRYAVPAADGISAPLVVYGLPPFNTVLARAVVRR SPYARRAAPEPLLDVLTALSLAVCEVRELVSLSLVLRVLPRRVVFRDARLRFAAGRSRLAIMPYPRHLEQRVDWHGTTMT VRPIRPEDEAAHTALLDAMTPDDLRMRFFGAIRSFDHSQVARMTQIDYDREMALIATVDDQDGKRQTLGVVRAVADPDNE TAEFAIAIRADQKGKGLGRLLMARIIDYARSRGTQWLVGEALRENGAMIGLARASGFTVASTAEPGVVGFRLKLQA
Sequences:
>Translated_796_residues MTVRNLDALFQPKSVAVVGASRRAGSLGAIVWARVLDGGFAGPIWPVNPKYDELNGHPVFARVARLPQPPSVALVCTPPA SWPGIVRQLGELGARCAILVGEARTAGERASVERALAAAKPYLLRIVGPGSLGVVTPQLNAHFGAPACCVSAGGVAWVSQ SNALTNAALGWAKARGLGFSHAVALGDEADVDAGDVLDYLASDPDTRAILLELDSIRSARKFMSAARAAARNKPVLALHT GRTDAGDALYTAAFQQAGMVRVDALDDLLDEIETLGVGRVTASDAVTVVTSDAGVARLAVDALAAVGDMRLAPWPSAATA ALATVLPLPPGIEAGNPLLLGDNVRPEDFGAVVRALGKLGGTGTLFVVHATSHNAPVEAVARELIEAKRASSHGVVACFF GGVDALTRDALHAQGIPVHTTPQRLARAYARLVEYRHGRELLMQTPEGLPPEPPAAVARARDEAREAAARGPTKLDGAGA AGWLAHFGLQPFTPGEPGGAESADTGSGVIVEMTVDMFDDPNFGPVFRYAVPAADGISAPLVVYGLPPFNTVLARAVVRR SPYARRAAPEPLLDVLTALSLAVCEVRELVSLSLVLRVLPRRVVFRDARLRFAAGRSRLAIMPYPRHLEQRVDWHGTTMT VRPIRPEDEAAHTALLDAMTPDDLRMRFFGAIRSFDHSQVARMTQIDYDREMALIATVDDQDGKRQTLGVVRAVADPDNE TAEFAIAIRADQKGKGLGRLLMARIIDYARSRGTQWLVGEALRENGAMIGLARASGFTVASTAEPGVVGFRLKLQA >Mature_795_residues TVRNLDALFQPKSVAVVGASRRAGSLGAIVWARVLDGGFAGPIWPVNPKYDELNGHPVFARVARLPQPPSVALVCTPPAS WPGIVRQLGELGARCAILVGEARTAGERASVERALAAAKPYLLRIVGPGSLGVVTPQLNAHFGAPACCVSAGGVAWVSQS NALTNAALGWAKARGLGFSHAVALGDEADVDAGDVLDYLASDPDTRAILLELDSIRSARKFMSAARAAARNKPVLALHTG RTDAGDALYTAAFQQAGMVRVDALDDLLDEIETLGVGRVTASDAVTVVTSDAGVARLAVDALAAVGDMRLAPWPSAATAA LATVLPLPPGIEAGNPLLLGDNVRPEDFGAVVRALGKLGGTGTLFVVHATSHNAPVEAVARELIEAKRASSHGVVACFFG GVDALTRDALHAQGIPVHTTPQRLARAYARLVEYRHGRELLMQTPEGLPPEPPAAVARARDEAREAAARGPTKLDGAGAA GWLAHFGLQPFTPGEPGGAESADTGSGVIVEMTVDMFDDPNFGPVFRYAVPAADGISAPLVVYGLPPFNTVLARAVVRRS PYARRAAPEPLLDVLTALSLAVCEVRELVSLSLVLRVLPRRVVFRDARLRFAAGRSRLAIMPYPRHLEQRVDWHGTTMTV RPIRPEDEAAHTALLDAMTPDDLRMRFFGAIRSFDHSQVARMTQIDYDREMALIATVDDQDGKRQTLGVVRAVADPDNET AEFAIAIRADQKGKGLGRLLMARIIDYARSRGTQWLVGEALRENGAMIGLARASGFTVASTAEPGVVGFRLKLQA
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=508, Percent_Identity=32.6771653543307, Blast_Score=235, Evalue=1e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 84121; Mature: 83990
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRNLDALFQPKSVAVVGASRRAGSLGAIVWARVLDGGFAGPIWPVNPKYDELNGHPVF CCCCCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH ARVARLPQPPSVALVCTPPASWPGIVRQLGELGARCAILVGEARTAGERASVERALAAAK HHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCC PYLLRIVGPGSLGVVTPQLNAHFGAPACCVSAGGVAWVSQSNALTNAALGWAKARGLGFS CEEEEEECCCCCEEECCCCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCH HAVALGDEADVDAGDVLDYLASDPDTRAILLELDSIRSARKFMSAARAAARNKPVLALHT HEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEC GRTDAGDALYTAAFQQAGMVRVDALDDLLDEIETLGVGRVTASDAVTVVTSDAGVARLAV CCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCHHHHHH DALAAVGDMRLAPWPSAATAALATVLPLPPGIEAGNPLLLGDNVRPEDFGAVVRALGKLG HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCC GTGTLFVVHATSHNAPVEAVARELIEAKRASSHGVVACFFGGVDALTRDALHAQGIPVHT CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCC TPQRLARAYARLVEYRHGRELLMQTPEGLPPEPPAAVARARDEAREAAARGPTKLDGAGA CHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC AGWLAHFGLQPFTPGEPGGAESADTGSGVIVEMTVDMFDDPNFGPVFRYAVPAADGISAP HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCC LVVYGLPPFNTVLARAVVRRSPYARRAAPEPLLDVLTALSLAVCEVRELVSLSLVLRVLP EEEEECCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRVVFRDARLRFAAGRSRLAIMPYPRHLEQRVDWHGTTMTVRPIRPEDEAAHTALLDAMT HHHHHHHHHHHEECCCCEEEECCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCC PDDLRMRFFGAIRSFDHSQVARMTQIDYDREMALIATVDDQDGKRQTLGVVRAVADPDNE CHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCC TAEFAIAIRADQKGKGLGRLLMARIIDYARSRGTQWLVGEALRENGAMIGLARASGFTVA CEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCCEEEEEECCCEEEE STAEPGVVGFRLKLQA CCCCCCEEEEEEEECC >Mature Secondary Structure TVRNLDALFQPKSVAVVGASRRAGSLGAIVWARVLDGGFAGPIWPVNPKYDELNGHPVF CCCCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH ARVARLPQPPSVALVCTPPASWPGIVRQLGELGARCAILVGEARTAGERASVERALAAAK HHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCC PYLLRIVGPGSLGVVTPQLNAHFGAPACCVSAGGVAWVSQSNALTNAALGWAKARGLGFS CEEEEEECCCCCEEECCCCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCH HAVALGDEADVDAGDVLDYLASDPDTRAILLELDSIRSARKFMSAARAAARNKPVLALHT HEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEC GRTDAGDALYTAAFQQAGMVRVDALDDLLDEIETLGVGRVTASDAVTVVTSDAGVARLAV CCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCHHHHHH DALAAVGDMRLAPWPSAATAALATVLPLPPGIEAGNPLLLGDNVRPEDFGAVVRALGKLG HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCC GTGTLFVVHATSHNAPVEAVARELIEAKRASSHGVVACFFGGVDALTRDALHAQGIPVHT CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCC TPQRLARAYARLVEYRHGRELLMQTPEGLPPEPPAAVARARDEAREAAARGPTKLDGAGA CHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC AGWLAHFGLQPFTPGEPGGAESADTGSGVIVEMTVDMFDDPNFGPVFRYAVPAADGISAP HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCC LVVYGLPPFNTVLARAVVRRSPYARRAAPEPLLDVLTALSLAVCEVRELVSLSLVLRVLP EEEEECCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRVVFRDARLRFAAGRSRLAIMPYPRHLEQRVDWHGTTMTVRPIRPEDEAAHTALLDAMT HHHHHHHHHHHEECCCCEEEECCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCC PDDLRMRFFGAIRSFDHSQVARMTQIDYDREMALIATVDDQDGKRQTLGVVRAVADPDNE CHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCC TAEFAIAIRADQKGKGLGRLLMARIIDYARSRGTQWLVGEALRENGAMIGLARASGFTVA CEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCCEEEEEECCCEEEE STAEPGVVGFRLKLQA CCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]