Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_012721 |
Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is katG2 [H]
Identifier: 238025447
GI number: 238025447
Start: 2654358
End: 2656541
Strand: Reverse
Name: katG2 [H]
Synonym: bglu_2g21370
Alternate gene names: 238025447
Gene position: 2656541-2654358 (Counterclockwise)
Preceding gene: 238025453
Following gene: 238025446
Centisome position: 93.96
GC content: 68.32
Gene sequence:
>2184_bases ATGTCGACTCAGACGAAGTGCCCGTTCAACCACACAGCCGGTGGCGGCACGTCGAACCGCGACTGGTGGCCGAACCAGAT CAACCTGAAGATCCTGCATCAGCACTCATCCCTGTCCGACCCGATGGACGAGGGCTTCAACTACGCCGACGCCTTCAACA GCCTCGACCTCAACGCCGTGAAGCAGGACCTGCGCGCGCTGATGACCGTGTCGCAGAGCTGGTGGCCGGCCGACTTCGGC CATTACGGCCCGTTCTTCATCCGCATGGCATGGCACAGCGCCGGCACCTACCGCACGGCCGACGGCCGCGGCGGCGCGGG CGGCGGCCAGCAGCGTTTCGCCCCGCTCAACAGCTGGCCCGACAACGTGAGCCTCGACAAGGCACGCCGGCTGATCTGGC CGGTCAAGCAGAAGTACGGCCGCAAGATCTCGTGGGCCGACCTGATCGTGCTGACCGGCAACGTCGCGCTCGAATCGATG GGCTTCAAGACCTTCGGCTTCGCGGGCGGCCGCGAAGACACCTGGGAGCCGGACGAGGACATCTACTGGGGCAGCGAGAC GACCTGGCTCGGCGACAAGCGCTATAGCGGCGACCGCGAACTCGAGAACCCGCTCGCGGCCGTGCAGATGGGCCTCATCT ACGTGAACCCGGAAGGCCCCAACGGCAACCCGGACCCGCTCGCCTCGGCGCGCGACATCCGCGAGACCTTCGCGCGCATG GCGATGAACGACGAGGAGACGGTCGCGCTGATCGCGGGCGGCCACACCTTCGGCAAGACCCACGGTGCCGGTGATGCCTC GCACGTCGGGCCGGAGCCGGAGGCCGCGCCGCTCGAACAGATGGGCCTCGGCTGGAAGAGCAGCTACGGCACGGGCTCGG GCGCGGACGCGATCACCAGCGGGCTGGAGGTGATCTGGACGTCCACGCCGACCAAGTGGAGCAACAACTTCTTCTGGAAC CTGTTCGGCTACGAGTGGGAGCTGACCAAGAGCCCGGCCGGCGCGCATCAGTGGCAGCCGAAGGGCGGCGCCGGGGCGAA CAGCGTGCCCGACCCGTTCGACAAGAACAAGCGCCGCGCGCCGTCGATGCTGACCTCCGACATCGCGCTGCGTGCCGATC CGGCCTACGAAAAGATCTCGCGCCGCTTCTTCGAGAACCCCGACGAGTTCGCCGACGCGTTCGCGCGCGCCTGGTTCAAG CTGACCCATCGCGACATGGGTCCGGTGTCGCGCTACCTCGGGCCGGAAGTGCCGAGCGAGCAGTTGCTGTGGCAGGACCC GCTGCCCGCGCGCGACTACGCGCTCATCGAGGACGAGGACGTGACCGCGCTGAAGGCGAAGGTGCTGGCCTCGGGCCTGT CGGTGTCGGAGCTGGTGTCCACCGCCTGGGCCTCGGCCTCCACGTTCCGCGGCTCGGACAAGCGCGGCGGCGCCAATGGC GCGCGCATCCGCCTCGCGCCGCAAAAGGACTGGGAGGCGAACCAGCCGGCGCAGCTCGCCAAGGTGCTCGACGTGCTCGC GAAGATCCAGGCCGATTTCAACGGCTCGGCCGCGGGCGGCAAGCAGGTGTCGCTGGCCGACCTGATCGTGATCGCCGGCA ACGCGGGCGTCGAGCAGGCCGCGAAGACGGCCGGCTTCGTGATCACGGTGCCGTTCACGGCAGGCCGCGTCGATGCGACG GCCGAGCAGACCGACGCGGAATCGTTCGCGGTGCTCGAGCCGGTGGCCGACGGCTTCCGCAACTACCTGAAGGGCAAGTT CACCATCCCGGCCGAGAAGCTGCTGATCGACAAGGCCCAGCTGCTGACCCTGACGGCGCCGGAAATGACGGTGCTGCTGG GCGGCCTGCGCGTGATCGGCGCGAATGTGGGCGGTGCGAAGCACGGCGTGCTGACCGATCGTCCGGAAGCGCTCACCAAC GACTTCTTCCGCAACCTGCTCGACATGAGCACGGAGTGGCGGCCGGTGTCGGAGGCGAACGACGAGTACGAAGGCCGCGA CCGCGAGACGGGCGCCGTGCGCTGGACCGGCACGCGCGTGGACCTGGTGTTCGGCTCGCACGCGCAGCTGCGTGCGATCT GCGAGGTCTACGCGAGCGAGGACTCGCAGCAGAAGTTCGTGCGCGACTTCGTGGCGGCCTGGACCAAGGTGATGAACCTC GATCGCTACGACGTGAAGAAGTGA
Upstream 100 bases:
>100_bases AACCTATTTCCGCTCGGCGGGCGCAGCCATTAGTATTCACGGACAATCCGGCCTTCATCCCCACGGGCCGTCGAGCGTTT GCGATCAAAGGAGAATACAG
Downstream 100 bases:
>100_bases GCGCCACGCAGTGAACGTGTAAGATGCGCCGGGCCGGCTGGCCCGGCCGCATGCCACGGCCGGGCCGGCTGGCCCGGCCG CATGCCACGCGGCGGCCGAT
Product: catalase/hydroperoxidase HPI(I)
Products: NA
Alternate protein names: CP 2; Peroxidase/catalase 2 [H]
Number of amino acids: Translated: 727; Mature: 726
Protein sequence:
>727_residues MSTQTKCPFNHTAGGGTSNRDWWPNQINLKILHQHSSLSDPMDEGFNYADAFNSLDLNAVKQDLRALMTVSQSWWPADFG HYGPFFIRMAWHSAGTYRTADGRGGAGGGQQRFAPLNSWPDNVSLDKARRLIWPVKQKYGRKISWADLIVLTGNVALESM GFKTFGFAGGREDTWEPDEDIYWGSETTWLGDKRYSGDRELENPLAAVQMGLIYVNPEGPNGNPDPLASARDIRETFARM AMNDEETVALIAGGHTFGKTHGAGDASHVGPEPEAAPLEQMGLGWKSSYGTGSGADAITSGLEVIWTSTPTKWSNNFFWN LFGYEWELTKSPAGAHQWQPKGGAGANSVPDPFDKNKRRAPSMLTSDIALRADPAYEKISRRFFENPDEFADAFARAWFK LTHRDMGPVSRYLGPEVPSEQLLWQDPLPARDYALIEDEDVTALKAKVLASGLSVSELVSTAWASASTFRGSDKRGGANG ARIRLAPQKDWEANQPAQLAKVLDVLAKIQADFNGSAAGGKQVSLADLIVIAGNAGVEQAAKTAGFVITVPFTAGRVDAT AEQTDAESFAVLEPVADGFRNYLKGKFTIPAEKLLIDKAQLLTLTAPEMTVLLGGLRVIGANVGGAKHGVLTDRPEALTN DFFRNLLDMSTEWRPVSEANDEYEGRDRETGAVRWTGTRVDLVFGSHAQLRAICEVYASEDSQQKFVRDFVAAWTKVMNL DRYDVKK
Sequences:
>Translated_727_residues MSTQTKCPFNHTAGGGTSNRDWWPNQINLKILHQHSSLSDPMDEGFNYADAFNSLDLNAVKQDLRALMTVSQSWWPADFG HYGPFFIRMAWHSAGTYRTADGRGGAGGGQQRFAPLNSWPDNVSLDKARRLIWPVKQKYGRKISWADLIVLTGNVALESM GFKTFGFAGGREDTWEPDEDIYWGSETTWLGDKRYSGDRELENPLAAVQMGLIYVNPEGPNGNPDPLASARDIRETFARM AMNDEETVALIAGGHTFGKTHGAGDASHVGPEPEAAPLEQMGLGWKSSYGTGSGADAITSGLEVIWTSTPTKWSNNFFWN LFGYEWELTKSPAGAHQWQPKGGAGANSVPDPFDKNKRRAPSMLTSDIALRADPAYEKISRRFFENPDEFADAFARAWFK LTHRDMGPVSRYLGPEVPSEQLLWQDPLPARDYALIEDEDVTALKAKVLASGLSVSELVSTAWASASTFRGSDKRGGANG ARIRLAPQKDWEANQPAQLAKVLDVLAKIQADFNGSAAGGKQVSLADLIVIAGNAGVEQAAKTAGFVITVPFTAGRVDAT AEQTDAESFAVLEPVADGFRNYLKGKFTIPAEKLLIDKAQLLTLTAPEMTVLLGGLRVIGANVGGAKHGVLTDRPEALTN DFFRNLLDMSTEWRPVSEANDEYEGRDRETGAVRWTGTRVDLVFGSHAQLRAICEVYASEDSQQKFVRDFVAAWTKVMNL DRYDVKK >Mature_726_residues STQTKCPFNHTAGGGTSNRDWWPNQINLKILHQHSSLSDPMDEGFNYADAFNSLDLNAVKQDLRALMTVSQSWWPADFGH YGPFFIRMAWHSAGTYRTADGRGGAGGGQQRFAPLNSWPDNVSLDKARRLIWPVKQKYGRKISWADLIVLTGNVALESMG FKTFGFAGGREDTWEPDEDIYWGSETTWLGDKRYSGDRELENPLAAVQMGLIYVNPEGPNGNPDPLASARDIRETFARMA MNDEETVALIAGGHTFGKTHGAGDASHVGPEPEAAPLEQMGLGWKSSYGTGSGADAITSGLEVIWTSTPTKWSNNFFWNL FGYEWELTKSPAGAHQWQPKGGAGANSVPDPFDKNKRRAPSMLTSDIALRADPAYEKISRRFFENPDEFADAFARAWFKL THRDMGPVSRYLGPEVPSEQLLWQDPLPARDYALIEDEDVTALKAKVLASGLSVSELVSTAWASASTFRGSDKRGGANGA RIRLAPQKDWEANQPAQLAKVLDVLAKIQADFNGSAAGGKQVSLADLIVIAGNAGVEQAAKTAGFVITVPFTAGRVDATA EQTDAESFAVLEPVADGFRNYLKGKFTIPAEKLLIDKAQLLTLTAPEMTVLLGGLRVIGANVGGAKHGVLTDRPEALTND FFRNLLDMSTEWRPVSEANDEYEGRDRETGAVRWTGTRVDLVFGSHAQLRAICEVYASEDSQQKFVRDFVAAWTKVMNLD RYDVKK
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity [H]
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790378, Length=725, Percent_Identity=62.3448275862069, Blast_Score=894, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - InterPro: IPR019793 [H]
Pfam domain/function: PF00141 peroxidase [H]
EC number: =1.11.1.6; =1.11.1.7 [H]
Molecular weight: Translated: 79701; Mature: 79570
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00435 PEROXIDASE_1 ; PS00436 PEROXIDASE_2 ; PS50873 PEROXIDASE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQTKCPFNHTAGGGTSNRDWWPNQINLKILHQHSSLSDPMDEGFNYADAFNSLDLNAV CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCHHHHHCCCCHHHH KQDLRALMTVSQSWWPADFGHYGPFFIRMAWHSAGTYRTADGRGGAGGGQQRFAPLNSWP HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCC DNVSLDKARRLIWPVKQKYGRKISWADLIVLTGNVALESMGFKTFGFAGGREDTWEPDED CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHCCCCEECCCCCCCCCCCCCCC IYWGSETTWLGDKRYSGDRELENPLAAVQMGLIYVNPEGPNGNPDPLASARDIRETFARM EEECCCCEECCCCCCCCCHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH AMNDEETVALIAGGHTFGKTHGAGDASHVGPEPEAAPLEQMGLGWKSSYGTGSGADAITS HCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHC GLEVIWTSTPTKWSNNFFWNLFGYEWELTKSPAGAHQWQPKGGAGANSVPDPFDKNKRRA CCEEEECCCCCCCCCCEEEEEECEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC PSMLTSDIALRADPAYEKISRRFFENPDEFADAFARAWFKLTHRDMGPVSRYLGPEVPSE CHHHHHCCEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC QLLWQDPLPARDYALIEDEDVTALKAKVLASGLSVSELVSTAWASASTFRGSDKRGGANG CCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCCCCCCCCCCC ARIRLAPQKDWEANQPAQLAKVLDVLAKIQADFNGSAAGGKQVSLADLIVIAGNAGVEQA CEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCHHHH AKTAGFVITVPFTAGRVDATAEQTDAESFAVLEPVADGFRNYLKGKFTIPAEKLLIDKAQ HHHCCEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCC LLTLTAPEMTVLLGGLRVIGANVGGAKHGVLTDRPEALTNDFFRNLLDMSTEWRPVSEAN EEEEECCHHHHHHCCHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC DEYEGRDRETGAVRWTGTRVDLVFGSHAQLRAICEVYASEDSQQKFVRDFVAAWTKVMNL CCCCCCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC DRYDVKK CHHCCCC >Mature Secondary Structure STQTKCPFNHTAGGGTSNRDWWPNQINLKILHQHSSLSDPMDEGFNYADAFNSLDLNAV CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCHHHHHCCCCHHHH KQDLRALMTVSQSWWPADFGHYGPFFIRMAWHSAGTYRTADGRGGAGGGQQRFAPLNSWP HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCC DNVSLDKARRLIWPVKQKYGRKISWADLIVLTGNVALESMGFKTFGFAGGREDTWEPDED CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHCCCCEECCCCCCCCCCCCCCC IYWGSETTWLGDKRYSGDRELENPLAAVQMGLIYVNPEGPNGNPDPLASARDIRETFARM EEECCCCEECCCCCCCCCHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH AMNDEETVALIAGGHTFGKTHGAGDASHVGPEPEAAPLEQMGLGWKSSYGTGSGADAITS HCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHC GLEVIWTSTPTKWSNNFFWNLFGYEWELTKSPAGAHQWQPKGGAGANSVPDPFDKNKRRA CCEEEECCCCCCCCCCEEEEEECEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC PSMLTSDIALRADPAYEKISRRFFENPDEFADAFARAWFKLTHRDMGPVSRYLGPEVPSE CHHHHHCCEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC QLLWQDPLPARDYALIEDEDVTALKAKVLASGLSVSELVSTAWASASTFRGSDKRGGANG CCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCCCCCCCCCCC ARIRLAPQKDWEANQPAQLAKVLDVLAKIQADFNGSAAGGKQVSLADLIVIAGNAGVEQA CEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCHHHH AKTAGFVITVPFTAGRVDATAEQTDAESFAVLEPVADGFRNYLKGKFTIPAEKLLIDKAQ HHHCCEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCC LLTLTAPEMTVLLGGLRVIGANVGGAKHGVLTDRPEALTNDFFRNLLDMSTEWRPVSEAN EEEEECCHHHHHHCCHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC DEYEGRDRETGAVRWTGTRVDLVFGSHAQLRAICEVYASEDSQQKFVRDFVAAWTKVMNL CCCCCCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC DRYDVKK CHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA