Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is bioI [H]
Identifier: 238025425
GI number: 238025425
Start: 2618662
End: 2619873
Strand: Reverse
Name: bioI [H]
Synonym: bglu_2g21150
Alternate gene names: 238025425
Gene position: 2619873-2618662 (Counterclockwise)
Preceding gene: 238025426
Following gene: 238025424
Centisome position: 92.66
GC content: 71.53
Gene sequence:
>1212_bases ATGTCCGATCCCGAGATTCAGCAGGTTTCCCTCTACGATCTGTTCCAGCCGCGCTGGCGTGCCGATCCCTATCCGCTGTA CCGCCGCCTGCGTGACGAGAGCCCGGTCCACGCGGACCCGAACGGCAACGGCTGGATCGTCTCGCGCCACGCCGACGTGG TGGCGGTGCTCGACGACGCGCGTTTCTCGGCCGCGCGCCTGGGCGGCATCGAGGACCCGGGCGGCGCCGAGCAGCTGATC CGCCGCACGCTGTCGAGGCAGATGCTGTTCCTCGACGGTGCCGATCACACGCGCCTGCGCAAGCTGTTCGCGAAGGCCTT CACGCCGCGCCGGCTCGACACCTTCCGGCCGCGCATCGAGGCACTCGCGCAGCGGATGCTGGCGGCCCGGAAGGGGCACA CGATCGACTTCATCGGCGAGTTCGCGGTGCCGTTGCCGGTGATGGTGATCGCCCTGGTGCTCGGCGTGCCGATGGACGCG CATGCGCAACTGCACGACTGGTCGCTCGCGTTCGGCAGCGTGATCAGCGGCCGGATGCTGTCGGAGGCGGAGACGGCGCA CGCGGAGGCCGGCATCGCCGCGTTCGGTGCGTATTTCGCGGCGCTGATCCGCGAGCGCCGGCGCGAGCCCTGCGACGACA TGCTCAGCGATCTGCTCGCGGCCGAGGAGGCCGGCGACCGCCTGGACGAGCCGGAGCTGATCGCGAACCTGATCCTGCTG CTGGCGGCGGGGCACGCCACCACCACCCACCTGCTCGGCAACGGCCTGCTCGCGCTGTCGCGCGAGCGCGAGCAGTGGCG GCTGCTGGCCGACGACCCCGCCATCGCGCCGGCTGCCGTCAACGAGCTGCTGCGCTTCGACGCGCCGGTGCAGCTGACGG GGCGCGCCGCGCGGGAAGACGTCGAACTGGGCGGACAGCGGCTGCCGAAGGGCGCCTATGTCTATACGCTGCTGGGCGCG GCGAACCGCGACGAGCGCCATTTCGCGGCGCCGGACACGCTCGACGTGCGGCGGCCCGTGTCGCGCGTGCTCTCGTTCGG GCACGGCGTGCATACCTGCCTCGGCGCGCTGCTCGCGCGCATCGAGGCGCAGATCGTGTTCACTTCGCTGGCCGCGCTGT ATCCCGGCATCGAGGTGGATGCGCAACAGGCGCAGCGCACCGAGAGCCTGTCGTTCCGCGGGCTGCGCAGCCTGCCGGTA CGGCTGGTGTGA
Upstream 100 bases:
>100_bases AGCGAGACACCGGCACGCGGCTCGCGTAGGATCGTCGACTCCGGCGAAGCGCCGTCCCGCGATTCGCCCAGCTTCTTCGT TCGGCACCTCCGGAGCCCCC
Downstream 100 bases:
>100_bases GCGGCCCGTGCCGTCGGGGTTGCGCCCGCGAACACCCTCGACTGGCCTGAAGGTCGAAGCCGGCGCGCGCCTGGGGCGGG CGGCTCGCAACGATGCTGCC
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MSDPEIQQVSLYDLFQPRWRADPYPLYRRLRDESPVHADPNGNGWIVSRHADVVAVLDDARFSAARLGGIEDPGGAEQLI RRTLSRQMLFLDGADHTRLRKLFAKAFTPRRLDTFRPRIEALAQRMLAARKGHTIDFIGEFAVPLPVMVIALVLGVPMDA HAQLHDWSLAFGSVISGRMLSEAETAHAEAGIAAFGAYFAALIRERRREPCDDMLSDLLAAEEAGDRLDEPELIANLILL LAAGHATTTHLLGNGLLALSREREQWRLLADDPAIAPAAVNELLRFDAPVQLTGRAAREDVELGGQRLPKGAYVYTLLGA ANRDERHFAAPDTLDVRRPVSRVLSFGHGVHTCLGALLARIEAQIVFTSLAALYPGIEVDAQQAQRTESLSFRGLRSLPV RLV
Sequences:
>Translated_403_residues MSDPEIQQVSLYDLFQPRWRADPYPLYRRLRDESPVHADPNGNGWIVSRHADVVAVLDDARFSAARLGGIEDPGGAEQLI RRTLSRQMLFLDGADHTRLRKLFAKAFTPRRLDTFRPRIEALAQRMLAARKGHTIDFIGEFAVPLPVMVIALVLGVPMDA HAQLHDWSLAFGSVISGRMLSEAETAHAEAGIAAFGAYFAALIRERRREPCDDMLSDLLAAEEAGDRLDEPELIANLILL LAAGHATTTHLLGNGLLALSREREQWRLLADDPAIAPAAVNELLRFDAPVQLTGRAAREDVELGGQRLPKGAYVYTLLGA ANRDERHFAAPDTLDVRRPVSRVLSFGHGVHTCLGALLARIEAQIVFTSLAALYPGIEVDAQQAQRTESLSFRGLRSLPV RLV >Mature_402_residues SDPEIQQVSLYDLFQPRWRADPYPLYRRLRDESPVHADPNGNGWIVSRHADVVAVLDDARFSAARLGGIEDPGGAEQLIR RTLSRQMLFLDGADHTRLRKLFAKAFTPRRLDTFRPRIEALAQRMLAARKGHTIDFIGEFAVPLPVMVIALVLGVPMDAH AQLHDWSLAFGSVISGRMLSEAETAHAEAGIAAFGAYFAALIRERRREPCDDMLSDLLAAEEAGDRLDEPELIANLILLL AAGHATTTHLLGNGLLALSREREQWRLLADDPAIAPAAVNELLRFDAPVQLTGRAAREDVELGGQRLPKGAYVYTLLGAA NRDERHFAAPDTLDVRRPVSRVLSFGHGVHTCLGALLARIEAQIVFTSLAALYPGIEVDAQQAQRTESLSFRGLRSLPVR LV
Specific function: Catalyzes the C-C bond cleavage of fatty acid linked to acyl carrier protein (ACP) to generate pimelic acid for biotin biosynthesis. It has high affinity for long-chain fatty acids with the greatest affinity for myristic acid [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 44412; Mature: 44281
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPEIQQVSLYDLFQPRWRADPYPLYRRLRDESPVHADPNGNGWIVSRHADVVAVLDDA CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEECCC RFSAARLGGIEDPGGAEQLIRRTLSRQMLFLDGADHTRLRKLFAKAFTPRRLDTFRPRIE HHHHHHCCCCCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHH ALAQRMLAARKGHTIDFIGEFAVPLPVMVIALVLGVPMDAHAQLHDWSLAFGSVISGRML HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH SEAETAHAEAGIAAFGAYFAALIRERRREPCDDMLSDLLAAEEAGDRLDEPELIANLILL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LAAGHATTTHLLGNGLLALSREREQWRLLADDPAIAPAAVNELLRFDAPVQLTGRAARED HHCCCHHHHHHHHCCHHEECCCHHHCEEECCCCCCCHHHHHHHHHCCCCCEECCHHHHHH VELGGQRLPKGAYVYTLLGAANRDERHFAAPDTLDVRRPVSRVLSFGHGVHTCLGALLAR HHHCHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH IEAQIVFTSLAALYPGIEVDAQQAQRTESLSFRGLRSLPVRLV HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHCCCCCCC >Mature Secondary Structure SDPEIQQVSLYDLFQPRWRADPYPLYRRLRDESPVHADPNGNGWIVSRHADVVAVLDDA CCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEECCC RFSAARLGGIEDPGGAEQLIRRTLSRQMLFLDGADHTRLRKLFAKAFTPRRLDTFRPRIE HHHHHHCCCCCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHH ALAQRMLAARKGHTIDFIGEFAVPLPVMVIALVLGVPMDAHAQLHDWSLAFGSVISGRML HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH SEAETAHAEAGIAAFGAYFAALIRERRREPCDDMLSDLLAAEEAGDRLDEPELIANLILL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LAAGHATTTHLLGNGLLALSREREQWRLLADDPAIAPAAVNELLRFDAPVQLTGRAARED HHCCCHHHHHHHHCCHHEECCCHHHCEEECCCCCCCHHHHHHHHHCCCCCEECCHHHHHH VELGGQRLPKGAYVYTLLGAANRDERHFAAPDTLDVRRPVSRVLSFGHGVHTCLGALLAR HHHCHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH IEAQIVFTSLAALYPGIEVDAQQAQRTESLSFRGLRSLPVRLV HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8763940; 9387221; 9384377 [H]