Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238025424

Identifier: 238025424

GI number: 238025424

Start: 2615167

End: 2617701

Strand: Reverse

Name: 238025424

Synonym: bglu_2g21130

Alternate gene names: NA

Gene position: 2617701-2615167 (Counterclockwise)

Preceding gene: 238025425

Following gene: 238025423

Centisome position: 92.59

GC content: 64.89

Gene sequence:

>2535_bases
ATGGCTTCCGAATCGCTGAGCAGAACATTACGAGGTGGTTATGCGCAGTTCGAGCGCGTGGTCAAACTCGACACGCCCGC
AGGCCCCGACCGGTTGGTGCCGCTCTGGGTCAAGGGCACTGCCCGCCTGGGCCGGGACTACGAATTCGTCGTCGAGGCCG
CCGCGCTGCTCGACGGCGGCGACATCGATGCACGGGCCATACTCGGCTCAGCGGTCACCTTGTGGATCAGGCAAACCGAC
CGCTCCTACATGCCCATTCACGGCTACGTTCATCACTTCGCCGAATTGGGCGCGGACGGCTCGTGCGCCTACTATCAACT
CCGATTCTCGTCGTGGCTCTACTTCCTGCGCTTGCGCCGCGATCAGCGTGACTGGCAAGAAACGACCGGCGAACAAATTC
TGATCGACGTTTTTCGAGCCCACCCTCAGGCAACCACACATAACGCCTACCGTTTCGATCTGAACGAGCCGATGCCGGCA
TATTCCTACCGCATGCAGTGGGAAACCGATCTGAATTTCGTGTACCGGAGCATGGAGGAAGCCGGCGTGTTCGGGCGCTT
CGAATTTGCCGAAGACGGCCGCTCGCATACGTTCGTCGTGACGGACAGCGTCTCTCAGGTGCCGGTGCTCAAGCAGAGTG
TCGTGCAGCTCAGCCACGCGGGCGATAACGAGGAGTTCGACGGCTTCGTCTCGTTTCGCGAGCGGATGCAGTTGCAAAGC
GCGCGACTTACCGCCAACACCTTCGACTACAAGCAACCCAGCGCCGACAAGCGCATCGAATGCGCCACCGCATCGCCGGA
CGGGCTGCCGGTTGACGGCGAAGTGTACGACTACACCGGCGCCTATACCTGGGGGGCAGACAGCGACGGTGAGCGTTACG
TGCGCAACCGTATCGAGGCGTGGGAATCGCAGATCCAGCGATTCGACGCGGTGGGCGGCTTGCGGGCTGCGATGCCCGGC
TATCGGTTCACGCTTTCGCGAGGCGCGGCGCTCGACAGCGGCCAGTCAGGCGACAACGAATACGTCATTCTCGGTGTGGA
CTGGATGATCCGCAACAACGTGCCGGGCCTGGACGCCTATCCGTCGCTCGAGGACAGCCTGCGCGACGAGCTCGCGGCAC
GGGCCGCCGGCCGGGCAGGCTCGGCGGGCGGGGACGTGGACGGCAGCCAGGGCTTCTTTCAGGTCAAGGTGGAATTGCAG
CGGCGCAGCACGCCATTCCGCCTGCCTCGGGAGCATCGCAAGCCCACCATGTCGCTGATGAACGCCGTCGTCACCGCACC
CAACGGCGAAGAAGTGCTCACCGACCGCCTGAACCGCGCGAGGCTGCACTTCCCCTGGTATCGCGACGCGCAGGCCTGTT
GCTGGGTACGTACGGCGTTTGCCGATGCGGGCTCCCAGCGCGGCGCGGTTCATCCGCTGCGCGATGGCGATGAAGTTCTC
GTGGACTTCGTCGGCGGCGATTGCGACCGCCCCGTGGTGGTTTCGCGTGTCTTCGGCGGCGACACGCAACCGGTGTGGCA
CAGCGATGGACTGCTCTCCGGCTATCGGTCGAAGGAATATAGCGGCAGCGGCTACAACCAGCTGGCGCTGGATGATTCGA
CCGGGCAAAACCGCGTCCAACTTTACTCGAGCAGCTATCAGACTCACTTGCATCTCGGCTATCTCATCCAGCACGAGAAC
AATAGCCGCGGAGCCTTCCTGGGCCGGGGCTTCGACCTCAAATCCGACGCCTACGGCGCCTTGCGGGCCGGTCAGGGATT
ATTCGTGTCGACGCATCCGACCACAACGGCGCAGCCGCTCGACGTGGCCCCGGCGGCCGATCAGCTCGCCGGCGCACGTC
AGGTTGCCGACCTGGCCTCGCAGGCCAGCGCGGCGAATCGTGCGGAAGGCCTTGACGACGGGTTGCACGCACTCGATCGG
TTTACGCAGGCGACCCACTACAGCAACGCCGGCAGTGTGGCTGGAGGGCGTACCGCGGGCGGCGGGCAGGGAAGCGCCAA
CGGCTTCGCCATGCCGGTCATGCTGCTGGCCAGCCCCGCCGGCATGGGGCTGTCCACGCAGGACTCGCTTCAGGCCACCG
CCAGTCAGCACGTCAACGTGGTCAGCGGCCAGAGCACGCACGTCGCGGCGGGCAAATCGTTTCTCGTGAGCGCGATGGAA
AAGCTCAGCCTGTTCGTGCAGAACGCCGGCATGAAGCTTTTTGCGGCCAAGGGCAAGGTCGAGATTCAGGCGCAAAGCGA
CGCGATGGCGCTCTCGGCGCTCAAGGATCTGACGATCACGAGCGCCAGCGGGCGGCTCGTGCTGTCGGCCGACAAGGAAA
TCTGGATCGGCGCCGGCGGCTCGTATATCAAGATCACGCCGGACCTGATCGAGAACGGCACCACGGGCCAGATCCTCGAA
AAATGCGCGAGCTGGGACAAGCCCGGCGCCGCCTCGATGCGCCTGCCCGCCGAACTCCCGAGCGCGGCAAAGAGCTGCGC
ATGGAGGATGGGCGGCGCCGCGGCCGACAGCGCCTCGAGCGTAGAGCTGGGATGA

Upstream 100 bases:

>100_bases
GGCGATCCAGCCCGATTGACTGTCGGATGGCATTGCTAGAAGCCCTCCGCCATCTCTAAAATCCGAACCGGTCGAAAACA
TAAAACTTCCGGTACGGCGC

Downstream 100 bases:

>100_bases
CCATGAGCGACCTGAATATGCCCACGCTGGGCAACACCGATCCCACCAGTCCCCCAGCCGTCGAAGCTGTCGTCGTCGCC
TTGCGCAAATATTTCAGCCG

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; Rhs-Family Protein; Rhs Element Vgr Family; VGR-Like Protein; VgrG Protein; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; Rhs Element Vgr Related Protein; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Type VI Secretion System VgrG Family Protein; Rhs Family Protein; Rhs Element Vgr-Related Protein

Number of amino acids: Translated: 844; Mature: 843

Protein sequence:

>844_residues
MASESLSRTLRGGYAQFERVVKLDTPAGPDRLVPLWVKGTARLGRDYEFVVEAAALLDGGDIDARAILGSAVTLWIRQTD
RSYMPIHGYVHHFAELGADGSCAYYQLRFSSWLYFLRLRRDQRDWQETTGEQILIDVFRAHPQATTHNAYRFDLNEPMPA
YSYRMQWETDLNFVYRSMEEAGVFGRFEFAEDGRSHTFVVTDSVSQVPVLKQSVVQLSHAGDNEEFDGFVSFRERMQLQS
ARLTANTFDYKQPSADKRIECATASPDGLPVDGEVYDYTGAYTWGADSDGERYVRNRIEAWESQIQRFDAVGGLRAAMPG
YRFTLSRGAALDSGQSGDNEYVILGVDWMIRNNVPGLDAYPSLEDSLRDELAARAAGRAGSAGGDVDGSQGFFQVKVELQ
RRSTPFRLPREHRKPTMSLMNAVVTAPNGEEVLTDRLNRARLHFPWYRDAQACCWVRTAFADAGSQRGAVHPLRDGDEVL
VDFVGGDCDRPVVVSRVFGGDTQPVWHSDGLLSGYRSKEYSGSGYNQLALDDSTGQNRVQLYSSSYQTHLHLGYLIQHEN
NSRGAFLGRGFDLKSDAYGALRAGQGLFVSTHPTTTAQPLDVAPAADQLAGARQVADLASQASAANRAEGLDDGLHALDR
FTQATHYSNAGSVAGGRTAGGGQGSANGFAMPVMLLASPAGMGLSTQDSLQATASQHVNVVSGQSTHVAAGKSFLVSAME
KLSLFVQNAGMKLFAAKGKVEIQAQSDAMALSALKDLTITSASGRLVLSADKEIWIGAGGSYIKITPDLIENGTTGQILE
KCASWDKPGAASMRLPAELPSAAKSCAWRMGGAAADSASSVELG

Sequences:

>Translated_844_residues
MASESLSRTLRGGYAQFERVVKLDTPAGPDRLVPLWVKGTARLGRDYEFVVEAAALLDGGDIDARAILGSAVTLWIRQTD
RSYMPIHGYVHHFAELGADGSCAYYQLRFSSWLYFLRLRRDQRDWQETTGEQILIDVFRAHPQATTHNAYRFDLNEPMPA
YSYRMQWETDLNFVYRSMEEAGVFGRFEFAEDGRSHTFVVTDSVSQVPVLKQSVVQLSHAGDNEEFDGFVSFRERMQLQS
ARLTANTFDYKQPSADKRIECATASPDGLPVDGEVYDYTGAYTWGADSDGERYVRNRIEAWESQIQRFDAVGGLRAAMPG
YRFTLSRGAALDSGQSGDNEYVILGVDWMIRNNVPGLDAYPSLEDSLRDELAARAAGRAGSAGGDVDGSQGFFQVKVELQ
RRSTPFRLPREHRKPTMSLMNAVVTAPNGEEVLTDRLNRARLHFPWYRDAQACCWVRTAFADAGSQRGAVHPLRDGDEVL
VDFVGGDCDRPVVVSRVFGGDTQPVWHSDGLLSGYRSKEYSGSGYNQLALDDSTGQNRVQLYSSSYQTHLHLGYLIQHEN
NSRGAFLGRGFDLKSDAYGALRAGQGLFVSTHPTTTAQPLDVAPAADQLAGARQVADLASQASAANRAEGLDDGLHALDR
FTQATHYSNAGSVAGGRTAGGGQGSANGFAMPVMLLASPAGMGLSTQDSLQATASQHVNVVSGQSTHVAAGKSFLVSAME
KLSLFVQNAGMKLFAAKGKVEIQAQSDAMALSALKDLTITSASGRLVLSADKEIWIGAGGSYIKITPDLIENGTTGQILE
KCASWDKPGAASMRLPAELPSAAKSCAWRMGGAAADSASSVELG
>Mature_843_residues
ASESLSRTLRGGYAQFERVVKLDTPAGPDRLVPLWVKGTARLGRDYEFVVEAAALLDGGDIDARAILGSAVTLWIRQTDR
SYMPIHGYVHHFAELGADGSCAYYQLRFSSWLYFLRLRRDQRDWQETTGEQILIDVFRAHPQATTHNAYRFDLNEPMPAY
SYRMQWETDLNFVYRSMEEAGVFGRFEFAEDGRSHTFVVTDSVSQVPVLKQSVVQLSHAGDNEEFDGFVSFRERMQLQSA
RLTANTFDYKQPSADKRIECATASPDGLPVDGEVYDYTGAYTWGADSDGERYVRNRIEAWESQIQRFDAVGGLRAAMPGY
RFTLSRGAALDSGQSGDNEYVILGVDWMIRNNVPGLDAYPSLEDSLRDELAARAAGRAGSAGGDVDGSQGFFQVKVELQR
RSTPFRLPREHRKPTMSLMNAVVTAPNGEEVLTDRLNRARLHFPWYRDAQACCWVRTAFADAGSQRGAVHPLRDGDEVLV
DFVGGDCDRPVVVSRVFGGDTQPVWHSDGLLSGYRSKEYSGSGYNQLALDDSTGQNRVQLYSSSYQTHLHLGYLIQHENN
SRGAFLGRGFDLKSDAYGALRAGQGLFVSTHPTTTAQPLDVAPAADQLAGARQVADLASQASAANRAEGLDDGLHALDRF
TQATHYSNAGSVAGGRTAGGGQGSANGFAMPVMLLASPAGMGLSTQDSLQATASQHVNVVSGQSTHVAAGKSFLVSAMEK
LSLFVQNAGMKLFAAKGKVEIQAQSDAMALSALKDLTITSASGRLVLSADKEIWIGAGGSYIKITPDLIENGTTGQILEK
CASWDKPGAASMRLPAELPSAAKSCAWRMGGAAADSASSVELG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91609; Mature: 91478

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASESLSRTLRGGYAQFERVVKLDTPAGPDRLVPLWVKGTARLGRDYEFVVEAAALLDGG
CCCHHHHHHHHCCHHHHHHEEEECCCCCCCCEEEEEEECHHHCCCCHHHHHHHHHHHCCC
DIDARAILGSAVTLWIRQTDRSYMPIHGYVHHFAELGADGSCAYYQLRFSSWLYFLRLRR
CCCHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHH
DQRDWQETTGEQILIDVFRAHPQATTHNAYRFDLNEPMPAYSYRMQWETDLNFVYRSMEE
HHHHHHHCCCCCEEHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHH
AGVFGRFEFAEDGRSHTFVVTDSVSQVPVLKQSVVQLSHAGDNEEFDGFVSFRERMQLQS
CCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
ARLTANTFDYKQPSADKRIECATASPDGLPVDGEVYDYTGAYTWGADSDGERYVRNRIEA
HHEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCEEECCCCCCHHHHHHHHHHH
WESQIQRFDAVGGLRAAMPGYRFTLSRGAALDSGQSGDNEYVILGVDWMIRNNVPGLDAY
HHHHHHHHHHHCCHHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCC
PSLEDSLRDELAARAAGRAGSAGGDVDGSQGFFQVKVELQRRSTPFRLPREHRKPTMSLM
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHCCHHHHHH
NAVVTAPNGEEVLTDRLNRARLHFPWYRDAQACCWVRTAFADAGSQRGAVHPLRDGDEVL
HHHEECCCCHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
VDFVGGDCDRPVVVSRVFGGDTQPVWHSDGLLSGYRSKEYSGSGYNQLALDDSTGQNRVQ
EEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEE
LYSSSYQTHLHLGYLIQHENNSRGAFLGRGFDLKSDAYGALRAGQGLFVSTHPTTTAQPL
EEECCCCEEEEEEEEEEECCCCCCEEEECCCCCCCCCCHHHCCCCEEEEECCCCCCCCCC
DVAPAADQLAGARQVADLASQASAANRAEGLDDGLHALDRFTQATHYSNAGSVAGGRTAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GGQGSANGFAMPVMLLASPAGMGLSTQDSLQATASQHVNVVSGQSTHVAAGKSFLVSAME
CCCCCCCCCHHHHHEEECCCCCCCCCHHHHHHHHHHCEEEECCCCCEECCCHHHHHHHHH
KLSLFVQNAGMKLFAAKGKVEIQAQSDAMALSALKDLTITSASGRLVLSADKEIWIGAGG
HHHHHHHCCCCEEEEECCEEEEEECCCHHHHHHHHHCEEECCCCEEEEECCCEEEEECCC
SYIKITPDLIENGTTGQILEKCASWDKPGAASMRLPAELPSAAKSCAWRMGGAAADSASS
CEEEEEHHHHCCCCHHHHHHHHHCCCCCCCCCEECCHHCHHHHHHHHHHCCCCCCCCCCC
VELG
CCCC
>Mature Secondary Structure 
ASESLSRTLRGGYAQFERVVKLDTPAGPDRLVPLWVKGTARLGRDYEFVVEAAALLDGG
CCHHHHHHHHCCHHHHHHEEEECCCCCCCCEEEEEEECHHHCCCCHHHHHHHHHHHCCC
DIDARAILGSAVTLWIRQTDRSYMPIHGYVHHFAELGADGSCAYYQLRFSSWLYFLRLRR
CCCHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHH
DQRDWQETTGEQILIDVFRAHPQATTHNAYRFDLNEPMPAYSYRMQWETDLNFVYRSMEE
HHHHHHHCCCCCEEHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHH
AGVFGRFEFAEDGRSHTFVVTDSVSQVPVLKQSVVQLSHAGDNEEFDGFVSFRERMQLQS
CCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
ARLTANTFDYKQPSADKRIECATASPDGLPVDGEVYDYTGAYTWGADSDGERYVRNRIEA
HHEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCEEECCCCCCHHHHHHHHHHH
WESQIQRFDAVGGLRAAMPGYRFTLSRGAALDSGQSGDNEYVILGVDWMIRNNVPGLDAY
HHHHHHHHHHHCCHHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCC
PSLEDSLRDELAARAAGRAGSAGGDVDGSQGFFQVKVELQRRSTPFRLPREHRKPTMSLM
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHCCHHHHHH
NAVVTAPNGEEVLTDRLNRARLHFPWYRDAQACCWVRTAFADAGSQRGAVHPLRDGDEVL
HHHEECCCCHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
VDFVGGDCDRPVVVSRVFGGDTQPVWHSDGLLSGYRSKEYSGSGYNQLALDDSTGQNRVQ
EEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEE
LYSSSYQTHLHLGYLIQHENNSRGAFLGRGFDLKSDAYGALRAGQGLFVSTHPTTTAQPL
EEECCCCEEEEEEEEEEECCCCCCEEEECCCCCCCCCCHHHCCCCEEEEECCCCCCCCCC
DVAPAADQLAGARQVADLASQASAANRAEGLDDGLHALDRFTQATHYSNAGSVAGGRTAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GGQGSANGFAMPVMLLASPAGMGLSTQDSLQATASQHVNVVSGQSTHVAAGKSFLVSAME
CCCCCCCCCHHHHHEEECCCCCCCCCHHHHHHHHHHCEEEECCCCCEECCCHHHHHHHHH
KLSLFVQNAGMKLFAAKGKVEIQAQSDAMALSALKDLTITSASGRLVLSADKEIWIGAGG
HHHHHHHCCCCEEEEECCEEEEEECCCHHHHHHHHHCEEECCCCEEEEECCCEEEEECCC
SYIKITPDLIENGTTGQILEKCASWDKPGAASMRLPAELPSAAKSCAWRMGGAAADSASS
CEEEEEHHHHCCCCHHHHHHHHHCCCCCCCCCEECCHHCHHHHHHHHHHCCCCCCCCCCC
VELG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA