Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025409
Identifier: 238025409
GI number: 238025409
Start: 2597529
End: 2598602
Strand: Reverse
Name: 238025409
Synonym: bglu_2g20980
Alternate gene names: NA
Gene position: 2598602-2597529 (Counterclockwise)
Preceding gene: 238025410
Following gene: 238025408
Centisome position: 91.91
GC content: 60.61
Gene sequence:
>1074_bases ATGTTCAGATTTAATTTGCACAACTACGGGCGTGCCATCGCGGTGGCGGTGCTGCTAGCCAGTGCCGGCCCGGTGCTGGC TCAGACGGTTGGGACCTATCCGCCGATCGAAACGGCGATCAGCCTTCCCAAAGACGAGACGTCGCACCGCCAGCCGGTTG AATGGTGGTACATGACCGGCCACCTTACCGGGGTCGATCCGCAGGGCGGACAACGCCAGTACGGCTTCGAGCTCGTCGTG TTCCAAGTGGTCGGCGTTGCGGGCCTCACGCCCGTCTACAGCTCGCATTTCGCCATCTCCGACTTGAACCGCGGCCAGTT TTCGTTCGAGGAGCGGACTGCACCGGGCGGATTCTCGGTTCAGCCGGATCGTTTCGACCAGAACGTGCTCGGCTTCCAGA TGGGCGGCAGTAGCGGTCAATACTATGCAAAGGCCAGCCGGTCCGATCTCGACTATGCGATCGATTTCAAATTGACGCAA AAGGTACCCGTCACGTTGAATGGCATCAATGGCATCGAGACGATGGGGACCTTCGTCTCTCCTTACTATTCGTACACCGC ACTCGATACCAAGGGCACGCTCTGGGACCACGGCGTCCCTGTTCAAATTACTGGCGGGGCTACCTGGTACGACCACGAAT GGGCCAACTCGGTGCCCGGTACGGACGGCGGCGGCTGGACCTGGTTCGGCGTCAGCATGGCCGACAACACGCAGTACAAC TTGAGCTTCCTTCAGGACTCGACCGGCAAGGTCGTCAAGGCGATTGGCGTGAAAACGGCCAATGGCAGCTACGCGCCGAT TCCGGAGGACCAGCTCGCCATGCAGGAAATCGGAACCTGGAAGAGCCCGCACACCGGCTACACGTATGCGCGGAGCTGGC GCCTGACGCTGCCTGGCGGAACGATTACGGTTGTGCCGAAAATTCAGGATTCCGAGCTATCTGAGACCGGCCATCACTAC TACTACGAAGGGCCGGCGAGTGTCACCGGCACCATCAATGGGCAGCCCGCGACCGGCAACGCCTATGCGGAAGTCAATCC TCACGGGGTGGAATCAGGCGTTCTCCTGCCCTGA
Upstream 100 bases:
>100_bases TTGATGTGAATATTGCCGTTATTCGAGTCGCGGATAAGCTTTCGTGCTATTCCATAAATAAGGCACCCGAATTTCAGATG TTCTCTTGGGGAGGTTTTCA
Downstream 100 bases:
>100_bases GGCGGCCCGCGATGTCGCTGCCGTGCCCGATGAGCGGTCGCGCGCGATCGGCGTGCCGGCCAGCTCGCCTTACCTTTCTT ACTCCATGGAGCATATGATG
Product: secreted hydrolase-like protein
Products: NA
Alternate protein names: Secreted Hydrolase; Hydrolase; Hydroxyneurosporene Synthase; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Attachment Protein; Hydroxymethylglutaryl-Co A Reductase; Lipoprotein
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MFRFNLHNYGRAIAVAVLLASAGPVLAQTVGTYPPIETAISLPKDETSHRQPVEWWYMTGHLTGVDPQGGQRQYGFELVV FQVVGVAGLTPVYSSHFAISDLNRGQFSFEERTAPGGFSVQPDRFDQNVLGFQMGGSSGQYYAKASRSDLDYAIDFKLTQ KVPVTLNGINGIETMGTFVSPYYSYTALDTKGTLWDHGVPVQITGGATWYDHEWANSVPGTDGGGWTWFGVSMADNTQYN LSFLQDSTGKVVKAIGVKTANGSYAPIPEDQLAMQEIGTWKSPHTGYTYARSWRLTLPGGTITVVPKIQDSELSETGHHY YYEGPASVTGTINGQPATGNAYAEVNPHGVESGVLLP
Sequences:
>Translated_357_residues MFRFNLHNYGRAIAVAVLLASAGPVLAQTVGTYPPIETAISLPKDETSHRQPVEWWYMTGHLTGVDPQGGQRQYGFELVV FQVVGVAGLTPVYSSHFAISDLNRGQFSFEERTAPGGFSVQPDRFDQNVLGFQMGGSSGQYYAKASRSDLDYAIDFKLTQ KVPVTLNGINGIETMGTFVSPYYSYTALDTKGTLWDHGVPVQITGGATWYDHEWANSVPGTDGGGWTWFGVSMADNTQYN LSFLQDSTGKVVKAIGVKTANGSYAPIPEDQLAMQEIGTWKSPHTGYTYARSWRLTLPGGTITVVPKIQDSELSETGHHY YYEGPASVTGTINGQPATGNAYAEVNPHGVESGVLLP >Mature_357_residues MFRFNLHNYGRAIAVAVLLASAGPVLAQTVGTYPPIETAISLPKDETSHRQPVEWWYMTGHLTGVDPQGGQRQYGFELVV FQVVGVAGLTPVYSSHFAISDLNRGQFSFEERTAPGGFSVQPDRFDQNVLGFQMGGSSGQYYAKASRSDLDYAIDFKLTQ KVPVTLNGINGIETMGTFVSPYYSYTALDTKGTLWDHGVPVQITGGATWYDHEWANSVPGTDGGGWTWFGVSMADNTQYN LSFLQDSTGKVVKAIGVKTANGSYAPIPEDQLAMQEIGTWKSPHTGYTYARSWRLTLPGGTITVVPKIQDSELSETGHHY YYEGPASVTGTINGQPATGNAYAEVNPHGVESGVLLP
Specific function: Unknown
COG id: COG5621
COG function: function code R; Predicted secreted hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38727; Mature: 38727
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRFNLHNYGRAIAVAVLLASAGPVLAQTVGTYPPIETAISLPKDETSHRQPVEWWYMTG CEEECCHHCCHHHHHHHHHHCCCCHHHHHHCCCCCHHHHEECCCCCCCCCCCCEEEEEEE HLTGVDPQGGQRQYGFELVVFQVVGVAGLTPVYSSHFAISDLNRGQFSFEERTAPGGFSV EEECCCCCCCCCCCCCEEEEEEHHHHCCCCCHHCCCEEEECCCCCCCCCHHCCCCCCCCC QPDRFDQNVLGFQMGGSSGQYYAKASRSDLDYAIDFKLTQKVPVTLNGINGIETMGTFVS CCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEEEEEECCCCEEEECCCCHHHHHHHHC PYYSYTALDTKGTLWDHGVPVQITGGATWYDHEWANSVPGTDGGGWTWFGVSMADNTQYN CCEEEEEECCCCCEECCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEEEEEECCCEEE LSFLQDSTGKVVKAIGVKTANGSYAPIPEDQLAMQEIGTWKSPHTGYTYARSWRLTLPGG EEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCC TITVVPKIQDSELSETGHHYYYEGPASVTGTINGQPATGNAYAEVNPHGVESGVLLP EEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MFRFNLHNYGRAIAVAVLLASAGPVLAQTVGTYPPIETAISLPKDETSHRQPVEWWYMTG CEEECCHHCCHHHHHHHHHHCCCCHHHHHHCCCCCHHHHEECCCCCCCCCCCCEEEEEEE HLTGVDPQGGQRQYGFELVVFQVVGVAGLTPVYSSHFAISDLNRGQFSFEERTAPGGFSV EEECCCCCCCCCCCCCEEEEEEHHHHCCCCCHHCCCEEEECCCCCCCCCHHCCCCCCCCC QPDRFDQNVLGFQMGGSSGQYYAKASRSDLDYAIDFKLTQKVPVTLNGINGIETMGTFVS CCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEEEEEECCCCEEEECCCCHHHHHHHHC PYYSYTALDTKGTLWDHGVPVQITGGATWYDHEWANSVPGTDGGGWTWFGVSMADNTQYN CCEEEEEECCCCCEECCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEEEEEECCCEEE LSFLQDSTGKVVKAIGVKTANGSYAPIPEDQLAMQEIGTWKSPHTGYTYARSWRLTLPGG EEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCC TITVVPKIQDSELSETGHHYYYEGPASVTGTINGQPATGNAYAEVNPHGVESGVLLP EEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA