Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_012721 |
Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is plcN [H]
Identifier: 238025403
GI number: 238025403
Start: 2583705
End: 2585771
Strand: Reverse
Name: plcN [H]
Synonym: bglu_2g20900
Alternate gene names: 238025403
Gene position: 2585771-2583705 (Counterclockwise)
Preceding gene: 238025404
Following gene: 238025402
Centisome position: 91.46
GC content: 65.84
Gene sequence:
>2067_bases ATGGACCGTAGAAAATTCATCAAGAAAACCGCAGCCGCCGCTGCATCGGTCGCCGCGATGTCGGCACTGCCCGAAAGCAT CCGCCGCGCGTTCGCGATTCCCGCGGCGAGCCGGCAAGGCACGATTGCCGACGTCGAGCACATCGTCGTGCTGATGATGG AGAACCGCTCGTTCGAGCAGTATCTGGGAACGCTGGCCGGCGTGCGCGGCTTCAACGACCGCCACACCCTGCCGATCGAT GGCCAGCCCTCCGTCTGGCAGCAGCCGGATGGCAAGGGCGGTTACGTGATGCCTTTCCACCTCGACAGCAAGACCACCAA GGCGCAGGCGATGAAGTCCCTGCCGCATGGCTGGCTCGACGGACACCAGATGTGGAACCACGGTCGCTGGGACAATTGGG TGCCGGCCAAGGGTTCGCTGACGATGGGCTATTTCACGCGCCAGGATTTGCCGTTCCATTTCGCGCTGGCCGACGCGTTC ACGGTATGCGATGCCTATTTCAGCTCCTGCATGGGGCCGACCAATACCAACCGCTCGCACCTGATGACCGGCATGATCGA CGTCGCGGGGACGGCGGGCGGCCCGCTGCTCGACAACTCGCCAACCAACGGCGTGCCGTTGACCTGGACGACTTATCCCG AGCGCCTGCAGGCCGCGGGCGTCAGTTGGCAGATCTACCAGGGCGTGACAGGCAACGAGCCTTTCAAGACCTCGGCGACG GTGCCCACTGTTCAGGGGGATATCGACAACCCGATCAGCCCGTTCAACGTCCTCAAGTTCTTTCCGGCCTTCAGCCAGTC AGCCGCAGGCTCGGCCCTCGCGCAGCGCGGCTGGTCGATCCGCACCTATGCGCAATTCGCCGCCGACATTGCCGCGGGCT CGCTGCCGCAAATCTCGTGGCTGCTGCCGCCGGCGCTCTGTTCCGAGCATCCCGTCTATACGCCCGCTGACGGCGCGACC TATATCGCGGCGATCCTGGATGCGTTGACGGCGAACCCTGCGGTATGGAGCAAGACTGCGCTGTTCATCACCTATGATGA GAACGACGGCTTCTTCGATCACGTCGTGCCGCCGACGCCGCCCGAGAATGCCAGCTACGGCCTGTCGAACGTCGATACGA CCGGTGAGGTCTACGGAGGCAATGCCAAGCATCCCGCAGGGCCTGTCGGGCCGGGGCCGCGCGTGCCGATGTTCGTGGTG TCGCCGTGGTCCAGAGGCGCATGGACCTGCTCGCAGGTGTTTGACCATACCTCGGTGATTCGCTTCATGGAGCAGCGTTT CGGCGTCATGGAGCCGAATATCAGCGCCTGGCGGCGCGCGGTGTGCGGCGATCTCACCAGCGCCTTCGATTTCGCGAATC CCGATGCGAGCGCGATCACCGTATCGTCGGTGACGGGGCTCAGCGCGGCCGCCGACGCGCAGAGCACGCTGCCGATGCCG GTGGTGCCGGCCAGCCAGCAGCAGCCGGTCCAGGAGGTGGGGGTGCGCAATGCGCGAGCGCTACCTTACGAGCTGTTCGT CGAAGCGAGTGACGATCCGAATTCGGGCGGAATTGCGCTGACTTTCGTCAACACCGGCTCGGTCGCCGCGGTTTTCCAGG TCTACGCGGCAGGCGCGACCAGCTCGGTCAAACGCTACACGGTTGCTGCAAAGTCGCGCCTGTCCGACAGCTGGGCCCGG CAGGCCGCCGGTGCGGGCCAGGCCGTCTACGATCTGACCGTGACGGGCCCCAACGGCTTTCTGCGCCGCTTCGTGTCCGG CGGATCGACGGTGGCACAGCAGGGCGTGAGCGCCTGCTACGAGGTCAGCCAGGGCGATCTGCGCTTCACGCTGATGAATG GCGGCAGCGCGCCTTGCACCTTCAGCCTGGTCGACAACCGCTATGGCGCCGCGGCGCAGCACGTCACGGTAGCGGCCGGC GCGACGGTCCAGCAGGACTGGAGCCTGGCAGCCAGCCATCGCTGGTACGACGTCAGCGTGAGTTCCAGCGTGGATCCGGG CTTCCTGCGCCTCTTCGCCGGTTACGTGGAGACCGGCGGCGCGGGCGTGACCGATCCGGCGATGTAG
Upstream 100 bases:
>100_bases GCGGTGGCGATACGGATTCGACGGCCCAGGTTTCGCCCTCGCCCTCGCCGGGCAGCCAGAAAGTCTTTCATTGCGGTAAT ACTAATTAAGCATCCTAATC
Downstream 100 bases:
>100_bases TACCCGCGCAGCTGGCGTGGCATGCGGCTCCGGGTTGCCGCGACACGCCAGCCGACACGATACGGCTCGAACTGCTGGCC GGGCCCGGCGCCTTCGCCGG
Product: Twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 688; Mature: 688
Protein sequence:
>688_residues MDRRKFIKKTAAAAASVAAMSALPESIRRAFAIPAASRQGTIADVEHIVVLMMENRSFEQYLGTLAGVRGFNDRHTLPID GQPSVWQQPDGKGGYVMPFHLDSKTTKAQAMKSLPHGWLDGHQMWNHGRWDNWVPAKGSLTMGYFTRQDLPFHFALADAF TVCDAYFSSCMGPTNTNRSHLMTGMIDVAGTAGGPLLDNSPTNGVPLTWTTYPERLQAAGVSWQIYQGVTGNEPFKTSAT VPTVQGDIDNPISPFNVLKFFPAFSQSAAGSALAQRGWSIRTYAQFAADIAAGSLPQISWLLPPALCSEHPVYTPADGAT YIAAILDALTANPAVWSKTALFITYDENDGFFDHVVPPTPPENASYGLSNVDTTGEVYGGNAKHPAGPVGPGPRVPMFVV SPWSRGAWTCSQVFDHTSVIRFMEQRFGVMEPNISAWRRAVCGDLTSAFDFANPDASAITVSSVTGLSAAADAQSTLPMP VVPASQQQPVQEVGVRNARALPYELFVEASDDPNSGGIALTFVNTGSVAAVFQVYAAGATSSVKRYTVAAKSRLSDSWAR QAAGAGQAVYDLTVTGPNGFLRRFVSGGSTVAQQGVSACYEVSQGDLRFTLMNGGSAPCTFSLVDNRYGAAAQHVTVAAG ATVQQDWSLAASHRWYDVSVSSSVDPGFLRLFAGYVETGGAGVTDPAM
Sequences:
>Translated_688_residues MDRRKFIKKTAAAAASVAAMSALPESIRRAFAIPAASRQGTIADVEHIVVLMMENRSFEQYLGTLAGVRGFNDRHTLPID GQPSVWQQPDGKGGYVMPFHLDSKTTKAQAMKSLPHGWLDGHQMWNHGRWDNWVPAKGSLTMGYFTRQDLPFHFALADAF TVCDAYFSSCMGPTNTNRSHLMTGMIDVAGTAGGPLLDNSPTNGVPLTWTTYPERLQAAGVSWQIYQGVTGNEPFKTSAT VPTVQGDIDNPISPFNVLKFFPAFSQSAAGSALAQRGWSIRTYAQFAADIAAGSLPQISWLLPPALCSEHPVYTPADGAT YIAAILDALTANPAVWSKTALFITYDENDGFFDHVVPPTPPENASYGLSNVDTTGEVYGGNAKHPAGPVGPGPRVPMFVV SPWSRGAWTCSQVFDHTSVIRFMEQRFGVMEPNISAWRRAVCGDLTSAFDFANPDASAITVSSVTGLSAAADAQSTLPMP VVPASQQQPVQEVGVRNARALPYELFVEASDDPNSGGIALTFVNTGSVAAVFQVYAAGATSSVKRYTVAAKSRLSDSWAR QAAGAGQAVYDLTVTGPNGFLRRFVSGGSTVAQQGVSACYEVSQGDLRFTLMNGGSAPCTFSLVDNRYGAAAQHVTVAAG ATVQQDWSLAASHRWYDVSVSSSVDPGFLRLFAGYVETGGAGVTDPAM >Mature_688_residues MDRRKFIKKTAAAAASVAAMSALPESIRRAFAIPAASRQGTIADVEHIVVLMMENRSFEQYLGTLAGVRGFNDRHTLPID GQPSVWQQPDGKGGYVMPFHLDSKTTKAQAMKSLPHGWLDGHQMWNHGRWDNWVPAKGSLTMGYFTRQDLPFHFALADAF TVCDAYFSSCMGPTNTNRSHLMTGMIDVAGTAGGPLLDNSPTNGVPLTWTTYPERLQAAGVSWQIYQGVTGNEPFKTSAT VPTVQGDIDNPISPFNVLKFFPAFSQSAAGSALAQRGWSIRTYAQFAADIAAGSLPQISWLLPPALCSEHPVYTPADGAT YIAAILDALTANPAVWSKTALFITYDENDGFFDHVVPPTPPENASYGLSNVDTTGEVYGGNAKHPAGPVGPGPRVPMFVV SPWSRGAWTCSQVFDHTSVIRFMEQRFGVMEPNISAWRRAVCGDLTSAFDFANPDASAITVSSVTGLSAAADAQSTLPMP VVPASQQQPVQEVGVRNARALPYELFVEASDDPNSGGIALTFVNTGSVAAVFQVYAAGATSSVKRYTVAAKSRLSDSWAR QAAGAGQAVYDLTVTGPNGFLRRFVSGGSTVAQQGVSACYEVSQGDLRFTLMNGGSAPCTFSLVDNRYGAAAQHVTVAAG ATVQQDWSLAASHRWYDVSVSSSVDPGFLRLFAGYVETGGAGVTDPAM
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 73264; Mature: 73264
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRRKFIKKTAAAAASVAAMSALPESIRRAFAIPAASRQGTIADVEHIVVLMMENRSFEQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCEEEEEEECCCCHHH YLGTLAGVRGFNDRHTLPIDGQPSVWQQPDGKGGYVMPFHLDSKTTKAQAMKSLPHGWLD HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCC GHQMWNHGRWDNWVPAKGSLTMGYFTRQDLPFHFALADAFTVCDAYFSSCMGPTNTNRSH CHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCHHH LMTGMIDVAGTAGGPLLDNSPTNGVPLTWTTYPERLQAAGVSWQIYQGVTGNEPFKTSAT HHHHHHEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCC VPTVQGDIDNPISPFNVLKFFPAFSQSAAGSALAQRGWSIRTYAQFAADIAAGSLPQISW CCEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC LLPPALCSEHPVYTPADGATYIAAILDALTANPAVWSKTALFITYDENDGFFDHVVPPTP CCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCEEEEEEEECCCCCCCCCCCCCC PENASYGLSNVDTTGEVYGGNAKHPAGPVGPGPRVPMFVVSPWSRGAWTCSQVFDHTSVI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEHHHHHHHHHHH RFMEQRFGVMEPNISAWRRAVCGDLTSAFDFANPDASAITVSSVTGLSAAADAQSTLPMP HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHCCCCCCCCCC VVPASQQQPVQEVGVRNARALPYELFVEASDDPNSGGIALTFVNTGSVAAVFQVYAAGAT CCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCC SSVKRYTVAAKSRLSDSWARQAAGAGQAVYDLTVTGPNGFLRRFVSGGSTVAQQGVSACY CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHH EVSQGDLRFTLMNGGSAPCTFSLVDNRYGAAAQHVTVAAGATVQQDWSLAASHRWYDVSV HCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCEECCCCCHHCCCEEEEEEE SSSVDPGFLRLFAGYVETGGAGVTDPAM CCCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDRRKFIKKTAAAAASVAAMSALPESIRRAFAIPAASRQGTIADVEHIVVLMMENRSFEQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCEEEEEEECCCCHHH YLGTLAGVRGFNDRHTLPIDGQPSVWQQPDGKGGYVMPFHLDSKTTKAQAMKSLPHGWLD HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCC GHQMWNHGRWDNWVPAKGSLTMGYFTRQDLPFHFALADAFTVCDAYFSSCMGPTNTNRSH CHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCHHH LMTGMIDVAGTAGGPLLDNSPTNGVPLTWTTYPERLQAAGVSWQIYQGVTGNEPFKTSAT HHHHHHEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCC VPTVQGDIDNPISPFNVLKFFPAFSQSAAGSALAQRGWSIRTYAQFAADIAAGSLPQISW CCEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC LLPPALCSEHPVYTPADGATYIAAILDALTANPAVWSKTALFITYDENDGFFDHVVPPTP CCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCEEEEEEEECCCCCCCCCCCCCC PENASYGLSNVDTTGEVYGGNAKHPAGPVGPGPRVPMFVVSPWSRGAWTCSQVFDHTSVI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEHHHHHHHHHHH RFMEQRFGVMEPNISAWRRAVCGDLTSAFDFANPDASAITVSSVTGLSAAADAQSTLPMP HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHCCCCCCCCCC VVPASQQQPVQEVGVRNARALPYELFVEASDDPNSGGIALTFVNTGSVAAVFQVYAAGAT CCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCC SSVKRYTVAAKSRLSDSWARQAAGAGQAVYDLTVTGPNGFLRRFVSGGSTVAQQGVSACY CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHH EVSQGDLRFTLMNGGSAPCTFSLVDNRYGAAAQHVTVAAGATVQQDWSLAASHRWYDVSV HCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCEECCCCCHHCCCEEEEEEE SSSVDPGFLRLFAGYVETGGAGVTDPAM CCCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2120196; 10984043 [H]