Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is pntAA [H]
Identifier: 238025375
GI number: 238025375
Start: 2540064
End: 2541158
Strand: Reverse
Name: pntAA [H]
Synonym: bglu_2g20530
Alternate gene names: 238025375
Gene position: 2541158-2540064 (Counterclockwise)
Preceding gene: 238025376
Following gene: 238025374
Centisome position: 89.88
GC content: 66.21
Gene sequence:
>1095_bases ATGGCTTTCAATATCTCGATTTTGAAGGAAACTCGGGCCGGAGAGTGCCGTGTCGCGCTCGTGCCGGTGGTTGCGTCGCG TTTGCAGCGGCTTGGTGCACGGATATATATGGAATCCGGTGCCGGCATGAAAGCGAAATTCTTGAATGAGGATTACGAAC AAGTCGATTTCGATTCGGATCGAATTCAGCTTGCCGCCCATGCGGATATCCTGCTCGCGGTGCAGCCGCCGCCGCTGGAG GTCGTCAATGCGCTGAAGCCGGGCGCGGTGCTGATTTCGTTTTTGCAGGCGCCGCACGAGGCGGCCCTGATCGAGGCGCT GCGCGCCCGGTGCGTCACCAGCTTCGCGATGGAGCGGATTCCGCGCATCAGCCGGGCACAGGCGATGGATGCGCTGTCGA GCCAGGCGGCGCTGGCGGGCTATTACGCGCCGCTTCTCGGCGCCGTGCATCTGCCGCGCATCCTGCCGATGCTGACCACG GCGGTCGGTTCGCTGCGCGCGGCGAAGGTGCTGGTGCTGGGGCTGGGCGTGGCGGGCCTGCAGGCGCTGGCTACCGCGCA CCGGCTCGGCGCGGTGACCGAGGGCTACGACGTGCGGCCGGAGACGCGCGAGCAGGCGCTCTCCCTCGGCGCCAAGTTCG TCGATACCGGGGTCGACGCGCGCGGCGAGGGCGGGTATGCGCGGGAGTTGTCCGAGGACGAACGGCAGCGCGTCGGCGCG GTGCTGGACAAGCATATCGCCGAAGCCGACATGATCATCACCACCGCATCGGTGCCGGGGCGCCGCGCGCCCCGGCTCGT GTCGCTCGCCCAGATCGAGAGGATGAAGCCAGGTGCCGTCATCGTCGACCTCGGCGCCGAAAACGGCGGCAACTGCGAGG GCACGGTGGCGGGAGAAACGGTGGAAATCGGGCCGGTCACGATTCTCGGGCCCTGCAACGTGCCTTCCCTGCTCAGCCAG CATGCCAGCGAACTCTATGCGAAGAACCTGTTGAATTTCGTCGGACTGCTGGTCAAGGACGGCGCGCTGCATATCGATTT CGACGACGAAATCGTGGCCGGGACCGCCGTCACGCATGACGGCGCCGTTCGCTAG
Upstream 100 bases:
>100_bases ATTTACTTGATCGCCGTCAATTCCCATCGAGCGGGCTCGAAGATTTGAATTAGTAATGAAATGATCGCCTGATAAATTCA CCAAAAACCACGGTGATTTT
Downstream 100 bases:
>100_bases CGCCCCTTCCCCTCGCCAGGCCTGCCATCACGTTATCGCTTGATCCGGGAATCATCGTGACACTGATAATCGCGCTTTAC ATTTTCATGCTCGCCGCTTT
Product: NAD(P) transhydrogenase subunit alpha-1
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha 1; Proton-translocating transhydrogenase component 1; Pyridine nucleotide transhydrogenase subunit alpha 1; dI [H]
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MAFNISILKETRAGECRVALVPVVASRLQRLGARIYMESGAGMKAKFLNEDYEQVDFDSDRIQLAAHADILLAVQPPPLE VVNALKPGAVLISFLQAPHEAALIEALRARCVTSFAMERIPRISRAQAMDALSSQAALAGYYAPLLGAVHLPRILPMLTT AVGSLRAAKVLVLGLGVAGLQALATAHRLGAVTEGYDVRPETREQALSLGAKFVDTGVDARGEGGYARELSEDERQRVGA VLDKHIAEADMIITTASVPGRRAPRLVSLAQIERMKPGAVIVDLGAENGGNCEGTVAGETVEIGPVTILGPCNVPSLLSQ HASELYAKNLLNFVGLLVKDGALHIDFDDEIVAGTAVTHDGAVR
Sequences:
>Translated_364_residues MAFNISILKETRAGECRVALVPVVASRLQRLGARIYMESGAGMKAKFLNEDYEQVDFDSDRIQLAAHADILLAVQPPPLE VVNALKPGAVLISFLQAPHEAALIEALRARCVTSFAMERIPRISRAQAMDALSSQAALAGYYAPLLGAVHLPRILPMLTT AVGSLRAAKVLVLGLGVAGLQALATAHRLGAVTEGYDVRPETREQALSLGAKFVDTGVDARGEGGYARELSEDERQRVGA VLDKHIAEADMIITTASVPGRRAPRLVSLAQIERMKPGAVIVDLGAENGGNCEGTVAGETVEIGPVTILGPCNVPSLLSQ HASELYAKNLLNFVGLLVKDGALHIDFDDEIVAGTAVTHDGAVR >Mature_363_residues AFNISILKETRAGECRVALVPVVASRLQRLGARIYMESGAGMKAKFLNEDYEQVDFDSDRIQLAAHADILLAVQPPPLEV VNALKPGAVLISFLQAPHEAALIEALRARCVTSFAMERIPRISRAQAMDALSSQAALAGYYAPLLGAVHLPRILPMLTTA VGSLRAAKVLVLGLGVAGLQALATAHRLGAVTEGYDVRPETREQALSLGAKFVDTGVDARGEGGYARELSEDERQRVGAV LDKHIAEADMIITTASVPGRRAPRLVSLAQIERMKPGAVIVDLGAENGGNCEGTVAGETVEIGPVTILGPCNVPSLLSQH ASELYAKNLLNFVGLLVKDGALHIDFDDEIVAGTAVTHDGAVR
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=378, Percent_Identity=34.3915343915344, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI122939153, Length=378, Percent_Identity=34.3915343915344, Blast_Score=201, Evalue=1e-51, Organism=Escherichia coli, GI1787887, Length=365, Percent_Identity=39.4520547945205, Blast_Score=244, Evalue=9e-66, Organism=Caenorhabditis elegans, GI17550456, Length=364, Percent_Identity=39.8351648351648, Blast_Score=251, Evalue=6e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 38516; Mature: 38385
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFNISILKETRAGECRVALVPVVASRLQRLGARIYMESGAGMKAKFLNEDYEQVDFDSD CEEEEEEEECCCCCCCEEEHHHHHHHHHHHHCCEEEEECCCCCEEHHHCCCHHHCCCCCC RIQLAAHADILLAVQPPPLEVVNALKPGAVLISFLQAPHEAALIEALRARCVTSFAMERI CEEEEEECEEEEEECCCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC PRISRAQAMDALSSQAALAGYYAPLLGAVHLPRILPMLTTAVGSLRAAKVLVLGLGVAGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH QALATAHRLGAVTEGYDVRPETREQALSLGAKFVDTGVDARGEGGYARELSEDERQRVGA HHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHHHHCCCCCCCCCCCHHHCCHHHHHHHHH VLDKHIAEADMIITTASVPGRRAPRLVSLAQIERMKPGAVIVDLGAENGGNCEGTVAGET HHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEECCCE VEIGPVTILGPCNVPSLLSQHASELYAKNLLNFVGLLVKDGALHIDFDDEIVAGTAVTHD EEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECEEECCC GAVR CCCC >Mature Secondary Structure AFNISILKETRAGECRVALVPVVASRLQRLGARIYMESGAGMKAKFLNEDYEQVDFDSD EEEEEEEECCCCCCCEEEHHHHHHHHHHHHCCEEEEECCCCCEEHHHCCCHHHCCCCCC RIQLAAHADILLAVQPPPLEVVNALKPGAVLISFLQAPHEAALIEALRARCVTSFAMERI CEEEEEECEEEEEECCCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC PRISRAQAMDALSSQAALAGYYAPLLGAVHLPRILPMLTTAVGSLRAAKVLVLGLGVAGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH QALATAHRLGAVTEGYDVRPETREQALSLGAKFVDTGVDARGEGGYARELSEDERQRVGA HHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHHHHCCCCCCCCCCCHHHCCHHHHHHHHH VLDKHIAEADMIITTASVPGRRAPRLVSLAQIERMKPGAVIVDLGAENGGNCEGTVAGET HHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEECCCE VEIGPVTILGPCNVPSLLSQHASELYAKNLLNFVGLLVKDGALHIDFDDEIVAGTAVTHD EEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECEEECCC GAVR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8075801 [H]