Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025370
Identifier: 238025370
GI number: 238025370
Start: 2532865
End: 2533392
Strand: Reverse
Name: 238025370
Synonym: bglu_2g20460
Alternate gene names: NA
Gene position: 2533392-2532865 (Counterclockwise)
Preceding gene: 238025372
Following gene: 238025369
Centisome position: 89.6
GC content: 70.45
Gene sequence:
>528_bases ATGACGACCTCATCCCGACGCGCGCTGGTGCTGTTCTACTCACGCAGCGAAACCACCGCCCGGCTGGCTCGGCAGCTTGC CGACGAACTCGGTGCCGATTGCGAGCGCCTGCACGAAATCGACGAGCAGCGCCGGGCCGGCCCGGTTGGCTATCTGCGCT CGCTGGTGCACGTGCTGGCGGGACGATCCGCCGATCTTCTGCCGACGCTCAGCACCATCGCGGCCTATCAGCTGGTCGTG ATCGGCACGCCGGTATGGGCCGGGCGCGTCTGCACCCCGGTGGCGACCTGGCTGGCCCGGCACGGCCGCGACGCGCGCGC AACCGCGCTGTTCTGCACCATGGGCGCAAGCGGCGACGCCGCGGTGTTCGCGCAGATGCAGGCGCTGATCGGTCAGCGGC CGCTCGGCAGCTGTGCTTTCCTTTCGCGCGACGTCCGGCGCGACGCGGTTCACGACAAGCTGACGCGCTTCGCCCGCACC ATCACGGACCGGCTTGCCGAGCGGCAATGGCAGGCGCATGCGCCGTGA
Upstream 100 bases:
>100_bases GTCGTCTCCCGCTCCGGGCCGGCCTTGACCTGAGTCAGCGAGATCGCGGTATCGCGGCCTAAGCTGGCCTGCCGATCTTC CCGCATGGCAGGAGCGGAGC
Downstream 100 bases:
>100_bases GCAGTCCGCCGGCGCGGACGGGGGCGCGTTGCGGCCCTGGCCGCGCCGCTGCGTCGGCACGCCGAGGCGGGCGCGGCGCC GGCCGGCCCCGCCGCGCCCG
Product: putative flavodoxin
Products: NA
Alternate protein names: Flavodoxin FldA; Flavodoxin Protein; Flavodoxin Related Protein
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTTSSRRALVLFYSRSETTARLARQLADELGADCERLHEIDEQRRAGPVGYLRSLVHVLAGRSADLLPTLSTIAAYQLVV IGTPVWAGRVCTPVATWLARHGRDARATALFCTMGASGDAAVFAQMQALIGQRPLGSCAFLSRDVRRDAVHDKLTRFART ITDRLAERQWQAHAP
Sequences:
>Translated_175_residues MTTSSRRALVLFYSRSETTARLARQLADELGADCERLHEIDEQRRAGPVGYLRSLVHVLAGRSADLLPTLSTIAAYQLVV IGTPVWAGRVCTPVATWLARHGRDARATALFCTMGASGDAAVFAQMQALIGQRPLGSCAFLSRDVRRDAVHDKLTRFART ITDRLAERQWQAHAP >Mature_174_residues TTSSRRALVLFYSRSETTARLARQLADELGADCERLHEIDEQRRAGPVGYLRSLVHVLAGRSADLLPTLSTIAAYQLVVI GTPVWAGRVCTPVATWLARHGRDARATALFCTMGASGDAAVFAQMQALIGQRPLGSCAFLSRDVRRDAVHDKLTRFARTI TDRLAERQWQAHAP
Specific function: Unknown
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19243; Mature: 19112
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSSRRALVLFYSRSETTARLARQLADELGADCERLHEIDEQRRAGPVGYLRSLVHVLA CCCCCCCEEEEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHC GRSADLLPTLSTIAAYQLVVIGTPVWAGRVCTPVATWLARHGRDARATALFCTMGASGDA CCCCCHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHCCCCCHHHHHEEECCCCCCH AVFAQMQALIGQRPLGSCAFLSRDVRRDAVHDKLTRFARTITDRLAERQWQAHAP HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTSSRRALVLFYSRSETTARLARQLADELGADCERLHEIDEQRRAGPVGYLRSLVHVLA CCCCCCEEEEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHC GRSADLLPTLSTIAAYQLVVIGTPVWAGRVCTPVATWLARHGRDARATALFCTMGASGDA CCCCCHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHCCCCCHHHHHEEECCCCCCH AVFAQMQALIGQRPLGSCAFLSRDVRRDAVHDKLTRFARTITDRLAERQWQAHAP HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA