Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025361
Identifier: 238025361
GI number: 238025361
Start: 2524550
End: 2525005
Strand: Reverse
Name: 238025361
Synonym: bglu_2g20370
Alternate gene names: NA
Gene position: 2525005-2524550 (Counterclockwise)
Preceding gene: 238025362
Following gene: 238025358
Centisome position: 89.31
GC content: 74.56
Gene sequence:
>456_bases ATGTACGAACGTATCTTTGCCGCATTGGACGACAGCCGCGGTGCGTGGCTCGCGCTCGCGCAGGCGATCGCGCTGGCGCG GGCATCGGGGGGCACGGTCGAGGCGAGGTATGTGGTGCCGGACGCGCCGCGGCTGATCGATTTCGACAGCGGCTACGTCG ACCGGCTCGAGCCGCACCGGCCCACGCCGGACCGCGCCGCGACCGTGACCGCCGCAGCGCAGGCGGCGCTGCGGCGCAGT GGAGTGCGCGGCAGCGCGTTGGCGATCGAGGCGGGTGGCGAGGACGTCTCGGCGGTGCTGGCGCGCGCGGCCATCGAATG CGACGCCGACCTGATCGTGATGGGCACCCGCGGCCGCCGCGGCTGGCGCAGGATGCTGCTCGGCAGCATCGCCGAATCGC TGGTGCGCGTCGCCGGCCGGCCGGTGCTGGTGGTGCGGGAGCTGCCGGCGCGCTGA
Upstream 100 bases:
>100_bases GGCGTGTGCCCGACCGGCCGGCGCGGGCTTGACGCAGGACAATGGGAAATCGTCGCGCTGATCCAGGCTGGCCGGTGGGA CACGGGCGAGGGCATCCGTC
Downstream 100 bases:
>100_bases GCGGCGGGCGAGATCCCGAGCACGCCGGCGGGCGCGGCCCCGGCGGCGCGCCGGATCAGTGCGAGAACAGCACGGGCACC GTCATCCTGTCGAGGACCGT
Product: UspA domain-containing protein
Products: NA
Alternate protein names: Universal Stress Protein UspA; Universal Stress Family Protein; Universal Stress Protein
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MYERIFAALDDSRGAWLALAQAIALARASGGTVEARYVVPDAPRLIDFDSGYVDRLEPHRPTPDRAATVTAAAQAALRRS GVRGSALAIEAGGEDVSAVLARAAIECDADLIVMGTRGRRGWRRMLLGSIAESLVRVAGRPVLVVRELPAR
Sequences:
>Translated_151_residues MYERIFAALDDSRGAWLALAQAIALARASGGTVEARYVVPDAPRLIDFDSGYVDRLEPHRPTPDRAATVTAAAQAALRRS GVRGSALAIEAGGEDVSAVLARAAIECDADLIVMGTRGRRGWRRMLLGSIAESLVRVAGRPVLVVRELPAR >Mature_151_residues MYERIFAALDDSRGAWLALAQAIALARASGGTVEARYVVPDAPRLIDFDSGYVDRLEPHRPTPDRAATVTAAAQAALRRS GVRGSALAIEAGGEDVSAVLARAAIECDADLIVMGTRGRRGWRRMLLGSIAESLVRVAGRPVLVVRELPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16091; Mature: 16091
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYERIFAALDDSRGAWLALAQAIALARASGGTVEARYVVPDAPRLIDFDSGYVDRLEPHR CCCHHEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCCCCCCCCC PTPDRAATVTAAAQAALRRSGVRGSALAIEAGGEDVSAVLARAAIECDADLIVMGTRGRR CCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCH GWRRMLLGSIAESLVRVAGRPVLVVRELPAR HHHHHHHHHHHHHHHHHCCCCEEEEECCCCC >Mature Secondary Structure MYERIFAALDDSRGAWLALAQAIALARASGGTVEARYVVPDAPRLIDFDSGYVDRLEPHR CCCHHEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCCCCCCCCC PTPDRAATVTAAAQAALRRSGVRGSALAIEAGGEDVSAVLARAAIECDADLIVMGTRGRR CCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCH GWRRMLLGSIAESLVRVAGRPVLVVRELPAR HHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA