Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025305
Identifier: 238025305
GI number: 238025305
Start: 2460028
End: 2460543
Strand: Reverse
Name: 238025305
Synonym: bglu_2g19790
Alternate gene names: NA
Gene position: 2460543-2460028 (Counterclockwise)
Preceding gene: 238025307
Following gene: 339717981
Centisome position: 87.03
GC content: 68.6
Gene sequence:
>516_bases ATGAGGGCGGATGACTGGCTGCAGGGCGAGTACTTCACGTACTTCGCATACGGATCGTGCATGAACCTCGCAAGCCTGTC TGCGTCGCTGGGCTGCGACGCGGCACCGTATTTCGTGGGGGCGGCGCAGCTCGACGGCCATCGTCTCGCGTTCAACTACG CGTCGCTCAACGAGCCGGTCTGTTGCGCGAACATCGAACCGGCCCCCGGTGCGAGTGTCGAGGGCGCGCTGTACCGGTTG CCGATGCCGGTGCTCGACGCGCTGGAGCGCCGCGAGGGCGTGCATCTCGGCCGCTACCTGCGCTGCACAGTCGAGGTGCT GGCGCGAGACGGCGTGCGCATGCGTGCGCTGACGTTTCGCGGCGCGGTGACCCTCGATCGCGACGCGGCGCCGAGTGCGC GTTACCGTGACCTGCTGGTTGCGGGCATGGCGGATGCCGGCGTGTCGGCGGCGTATCGCGACCGTACGGTCGCGTACCTG GCCGGGCTGCCTGAACGTCCGTCCGAAAGGCAGTGA
Upstream 100 bases:
>100_bases ATCTACGACCACTACGTGCTCGGGATGCCGAGCGCCGCGGGGGCATCGTGCTGAGGCGCGCGCAAGCGGCCACGCTCGCG CGGCTCGAGCGGGCGGCGCG
Downstream 100 bases:
>100_bases CGGCCGCCGTGCGCGGCCGGGAGAGATCAAGGCATCGAATGCTCCACAAGAGCGCTCGGGCCAAAGCTGCGTTTCCGACT TGGAACGTCGGTGAACGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MRADDWLQGEYFTYFAYGSCMNLASLSASLGCDAAPYFVGAAQLDGHRLAFNYASLNEPVCCANIEPAPGASVEGALYRL PMPVLDALERREGVHLGRYLRCTVEVLARDGVRMRALTFRGAVTLDRDAAPSARYRDLLVAGMADAGVSAAYRDRTVAYL AGLPERPSERQ
Sequences:
>Translated_171_residues MRADDWLQGEYFTYFAYGSCMNLASLSASLGCDAAPYFVGAAQLDGHRLAFNYASLNEPVCCANIEPAPGASVEGALYRL PMPVLDALERREGVHLGRYLRCTVEVLARDGVRMRALTFRGAVTLDRDAAPSARYRDLLVAGMADAGVSAAYRDRTVAYL AGLPERPSERQ >Mature_171_residues MRADDWLQGEYFTYFAYGSCMNLASLSASLGCDAAPYFVGAAQLDGHRLAFNYASLNEPVCCANIEPAPGASVEGALYRL PMPVLDALERREGVHLGRYLRCTVEVLARDGVRMRALTFRGAVTLDRDAAPSARYRDLLVAGMADAGVSAAYRDRTVAYL AGLPERPSERQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18616; Mature: 18616
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRADDWLQGEYFTYFAYGSCMNLASLSASLGCDAAPYFVGAAQLDGHRLAFNYASLNEPV CCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECCCCCCE CCANIEPAPGASVEGALYRLPMPVLDALERREGVHLGRYLRCTVEVLARDGVRMRALTFR EECCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEC GAVTLDRDAAPSARYRDLLVAGMADAGVSAAYRDRTVAYLAGLPERPSERQ CCEEECCCCCCCHHHHHHHEECCCCCCCCHHHHCCEEEEEECCCCCCCCCC >Mature Secondary Structure MRADDWLQGEYFTYFAYGSCMNLASLSASLGCDAAPYFVGAAQLDGHRLAFNYASLNEPV CCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECCCCCCE CCANIEPAPGASVEGALYRLPMPVLDALERREGVHLGRYLRCTVEVLARDGVRMRALTFR EECCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEC GAVTLDRDAAPSARYRDLLVAGMADAGVSAAYRDRTVAYLAGLPERPSERQ CCEEECCCCCCCHHHHHHHEECCCCCCCCHHHHCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA