Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025265
Identifier: 238025265
GI number: 238025265
Start: 2410096
End: 2410680
Strand: Reverse
Name: 238025265
Synonym: bglu_2g19370
Alternate gene names: NA
Gene position: 2410680-2410096 (Counterclockwise)
Preceding gene: 238025266
Following gene: 238025264
Centisome position: 85.26
GC content: 69.23
Gene sequence:
>585_bases ATGAACTCATCGAATGCGGAAAATATCGGCGATGCGGTATCGGCGCCGCGCGGCCGTGCGATTCCCGTCGCCGAGTTGTT CTTCACGTTCTCGCTGATCGGTCTGTGCGGATTCGGCGGCGTCATTCCGTGGCTCAGGCGAACCCTGGTCGACCAGAAGC GCTGGCTCGACGATGCCGGATTCACCGAGATGCTCAGCATCGGCCAAATCCTGCCCGGTGCGACCGTCACGAATCTCGCG GTGATCTTCGGCTATCGGCACGCCGGCGGCGCGGGCGCGCTCGCGGCGGTGAGCGGCCTGCTGATCTGGCCGGTGGCGCT CGTGCTGCTGCTCGCGCGCGTGTACCAGCACTACCTGACGGTGCCCGGGGTGCAGGGCGCGCTGCACGGCATGGCGCTGG CCGGCACCGGCCTGGTGCTGGGCACCGGCTTGCGGCTCGCGCTGGGGCAGCCCAGGACCTGGCGGGCGTTGCTGTTCGGT GCCGCGACGCTCGCGATCATCGGCGTGCTGCATTGGCCGCTGGCCTCCCTCGCGGTGGTCGTGCCGCTCGCGATCATGGT CGAATCCCTGGCCCAGCGGCGGTGA
Upstream 100 bases:
>100_bases CAGGTGATTCACGTCAACGGCGGGGCCGAGCGCGCCCGCTGATCGCGGCTTCACCCCGGGCACCGGCGCGCCTCGCCGGT GCCCACTTCTCCTATTGCCC
Downstream 100 bases:
>100_bases CTTCATGGACGTCCTGCTCAGTCTCGCCCGCCATTTCCTGTTGATGTCGCTGCTGGCCTTCGGCGGCGGCAATGTCACCC TGCCCGAGACGCATCGTTAT
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MNSSNAENIGDAVSAPRGRAIPVAELFFTFSLIGLCGFGGVIPWLRRTLVDQKRWLDDAGFTEMLSIGQILPGATVTNLA VIFGYRHAGGAGALAAVSGLLIWPVALVLLLARVYQHYLTVPGVQGALHGMALAGTGLVLGTGLRLALGQPRTWRALLFG AATLAIIGVLHWPLASLAVVVPLAIMVESLAQRR
Sequences:
>Translated_194_residues MNSSNAENIGDAVSAPRGRAIPVAELFFTFSLIGLCGFGGVIPWLRRTLVDQKRWLDDAGFTEMLSIGQILPGATVTNLA VIFGYRHAGGAGALAAVSGLLIWPVALVLLLARVYQHYLTVPGVQGALHGMALAGTGLVLGTGLRLALGQPRTWRALLFG AATLAIIGVLHWPLASLAVVVPLAIMVESLAQRR >Mature_194_residues MNSSNAENIGDAVSAPRGRAIPVAELFFTFSLIGLCGFGGVIPWLRRTLVDQKRWLDDAGFTEMLSIGQILPGATVTNLA VIFGYRHAGGAGALAAVSGLLIWPVALVLLLARVYQHYLTVPGVQGALHGMALAGTGLVLGTGLRLALGQPRTWRALLFG AATLAIIGVLHWPLASLAVVVPLAIMVESLAQRR
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 20370; Mature: 20370
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSNAENIGDAVSAPRGRAIPVAELFFTFSLIGLCGFGGVIPWLRRTLVDQKRWLDDAG CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC FTEMLSIGQILPGATVTNLAVIFGYRHAGGAGALAAVSGLLIWPVALVLLLARVYQHYLT HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VPGVQGALHGMALAGTGLVLGTGLRLALGQPRTWRALLFGAATLAIIGVLHWPLASLAVV CCCHHHHHHHHHHHCCCHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPLAIMVESLAQRR HHHHHHHHHHHHCC >Mature Secondary Structure MNSSNAENIGDAVSAPRGRAIPVAELFFTFSLIGLCGFGGVIPWLRRTLVDQKRWLDDAG CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC FTEMLSIGQILPGATVTNLAVIFGYRHAGGAGALAAVSGLLIWPVALVLLLARVYQHYLT HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VPGVQGALHGMALAGTGLVLGTGLRLALGQPRTWRALLFGAATLAIIGVLHWPLASLAVV CCCHHHHHHHHHHHCCCHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPLAIMVESLAQRR HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]