Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025115
Identifier: 238025115
GI number: 238025115
Start: 2218560
End: 2218943
Strand: Reverse
Name: 238025115
Synonym: bglu_2g17740
Alternate gene names: NA
Gene position: 2218943-2218560 (Counterclockwise)
Preceding gene: 238025119
Following gene: 238025114
Centisome position: 78.48
GC content: 67.45
Gene sequence:
>384_bases ATGTCCTCATCCGATCGCCCCGTCCGGGCTCCCGGCCCGGATCATCCGATTTCGATCGCGCCGACGCTCGCTCAGGTGCG CGTCACGGCCGGCGCCGCGCCGCTCGCCGACACGCATCGCGCGCTGACACTGCGCGAGGCCAGTTACGGGCCGGTCCAGT ACGTGCCGCGCGCCGACGTCGACCTCACGCGCGTCGAGCGCAGCGCGCATACCAGCTACTGCCCCTACAAGGGCGAGGCT GTCTACTACTCGATTCCCGAACTGGGCAAACGCGGCGAGAATGCGATCTGGTCGTATGAGACGCCCTACGACGCGGTGGC GCCGATCGCCGGCCATTTCGCGTTCTATCCGGATCGGGTCGACGCCATCGAGATTGCACCTTAA
Upstream 100 bases:
>100_bases TGGCCGCCGTGAGGCCGTGCCGGTGCCGCACGCCATTCACGAATTCAACGTAGGATGCGTGAGTCATGTCAATCGCGATG TCCGCCGAAGGAGCGAGTCC
Downstream 100 bases:
>100_bases TTTTCGCCGCCGCCGAGGCACGCCGCTGTCACCGCTGCCGCGCCGCGCGTGGAGCGACTTGCGTGCCCGGCGCCGCGGGC CGCGCCGGCCCCGCCGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MSSSDRPVRAPGPDHPISIAPTLAQVRVTAGAAPLADTHRALTLREASYGPVQYVPRADVDLTRVERSAHTSYCPYKGEA VYYSIPELGKRGENAIWSYETPYDAVAPIAGHFAFYPDRVDAIEIAP
Sequences:
>Translated_127_residues MSSSDRPVRAPGPDHPISIAPTLAQVRVTAGAAPLADTHRALTLREASYGPVQYVPRADVDLTRVERSAHTSYCPYKGEA VYYSIPELGKRGENAIWSYETPYDAVAPIAGHFAFYPDRVDAIEIAP >Mature_126_residues SSSDRPVRAPGPDHPISIAPTLAQVRVTAGAAPLADTHRALTLREASYGPVQYVPRADVDLTRVERSAHTSYCPYKGEAV YYSIPELGKRGENAIWSYETPYDAVAPIAGHFAFYPDRVDAIEIAP
Specific function: Unknown
COG id: COG2343
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13827; Mature: 13695
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSDRPVRAPGPDHPISIAPTLAQVRVTAGAAPLADTHRALTLREASYGPVQYVPRADV CCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCCCEEEEEECCCCCCEEECCCCCC DLTRVERSAHTSYCPYKGEAVYYSIPELGKRGENAIWSYETPYDAVAPIAGHFAFYPDRV CHHHHHHHCCCCCCCCCCCEEEEECHHHCCCCCCCEEECCCCCHHHHHHHCCEEECCCCC DAIEIAP CEEEECC >Mature Secondary Structure SSSDRPVRAPGPDHPISIAPTLAQVRVTAGAAPLADTHRALTLREASYGPVQYVPRADV CCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCCCEEEEEECCCCCCEEECCCCCC DLTRVERSAHTSYCPYKGEAVYYSIPELGKRGENAIWSYETPYDAVAPIAGHFAFYPDRV CHHHHHHHCCCCCCCCCCCEEEEECHHHCCCCCCCEEECCCCCHHHHHHHCCEEECCCCC DAIEIAP CEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA