Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025114
Identifier: 238025114
GI number: 238025114
Start: 2217125
End: 2218372
Strand: Reverse
Name: 238025114
Synonym: bglu_2g17730
Alternate gene names: NA
Gene position: 2218372-2217125 (Counterclockwise)
Preceding gene: 238025115
Following gene: 238025113
Centisome position: 78.46
GC content: 70.59
Gene sequence:
>1248_bases ATGACCAAGAACGAACTCTCGGCGCGCACCCTCGCGTCAACCCTGGAACGGGAGATCGCCGACGTTCGGGCTCACAGCCT CGAACTGGCGAGCCCGCTCAGCGCCGAGGATCAGGCGCTACAGTCGATGCCGGACGCGAGTCCGACCAAATGGCACCTCG GCCACACCACCTGGTTCTTCGAGACGGTGATCCTCGCGCGCCATGTGCCCGGCTACGTGCCGTTCGACGAACGCTTCGCC TACCTGTTCAATTCGTACTACGAGGCGCTCGGCCCGCGCCACGCGCGGCCGCAGCGCGGGATGCTGTCGCGGCCGTCGCT CGACGAGGTCCATGCCTACCGGCGCCACGTCGACGCGCGGCTGCTGGAACTGGTGGCGGGCGCCGACCTGCCGCTGCTCG TCGAGATCGCGCCCGAGATCACGCTCGGCCTGAACCATGAGCAGCAGCATCAGGAACTGCTGCTGACCGACATCCTGCAC GCGTTCTCGCTCAATCCGCTGCTGCCTGCCTACCGCGCCGACGGCGCCGCGCCGAGCCTGCCCGCCGGCCCGCCGGCGGG CGCACCGCGCTGGCTCGCGCATGCGGGCGGCATCGTCGAGATCGGCCACGACGGCAACGGTTTCGCGTTCGACAACGAAG GCCCGCGCCACCAGGCGCTGGTGCGGCCGTTCGAGATCGCGGACCGGCTGGTGAGCAACCGCGACTACGCGGCCTTCATC GCCGACGGCGGCTACAAGAGCGCGGCGCTGTGGCTGTCCGACGGCTGGGCGGCGGTACAGCGCGAAGGCTGGCGTGCGCC GGCCTACTGGCATGCGCGCGAGGCCGGCGCCGAGCCGCCGGACGCGGCCGGCTGGCAGGCGTTCGGCCTAGGCGGCCTGC AGGCGCTCGATCCCGACGCGCCGGTGCAGCATCTGAGTTTCTTCGAGGCCGCGGCCTATGCGGAATGGGCCGGCGCGCGG CTGCCGACCGAGTTCGAATGGGAGGCGGCCTGCGCGCTGCCCGGCATCGCGCAGATGCTCGGCCACGTCTGGCAATGGAC GCGTTCGTCCTACGATCCGTATCCGGGCTTCCGGCCGCTGCCCGGCATTGCCTCGGAATACAACGGCAAGTTCATGGTGG GACAGCAGGTGTTGCGCGGCAGCAGCCTCGCCACGCCGCGCGGCCACGCGCGGCCGACCTACCGCAACTTCTTCCCGCCG GCCGCGCGCTGGCAATTCACAGGAGTGCGCCTTGTACGAGACCTCTGA
Upstream 100 bases:
>100_bases GCCCCGCCGTCCGCGCGCCGGCCGCGTGCAACGCGGGACGCCTCGTGATTCAAGGCCGGCCCGCCGCCGCAGGCGGCCAT CACCCCCGAGACCTCACAAG
Downstream 100 bases:
>100_bases CCTGTTCCGACCCGACGCGGGCACCGCTGCCCGTGCCCGCAAGCCGAGCCCGTTCGGCCGCGACCTGATCGAAGGGCTGA GCACGACGCCTCGCAGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MTKNELSARTLASTLEREIADVRAHSLELASPLSAEDQALQSMPDASPTKWHLGHTTWFFETVILARHVPGYVPFDERFA YLFNSYYEALGPRHARPQRGMLSRPSLDEVHAYRRHVDARLLELVAGADLPLLVEIAPEITLGLNHEQQHQELLLTDILH AFSLNPLLPAYRADGAAPSLPAGPPAGAPRWLAHAGGIVEIGHDGNGFAFDNEGPRHQALVRPFEIADRLVSNRDYAAFI ADGGYKSAALWLSDGWAAVQREGWRAPAYWHAREAGAEPPDAAGWQAFGLGGLQALDPDAPVQHLSFFEAAAYAEWAGAR LPTEFEWEAACALPGIAQMLGHVWQWTRSSYDPYPGFRPLPGIASEYNGKFMVGQQVLRGSSLATPRGHARPTYRNFFPP AARWQFTGVRLVRDL
Sequences:
>Translated_415_residues MTKNELSARTLASTLEREIADVRAHSLELASPLSAEDQALQSMPDASPTKWHLGHTTWFFETVILARHVPGYVPFDERFA YLFNSYYEALGPRHARPQRGMLSRPSLDEVHAYRRHVDARLLELVAGADLPLLVEIAPEITLGLNHEQQHQELLLTDILH AFSLNPLLPAYRADGAAPSLPAGPPAGAPRWLAHAGGIVEIGHDGNGFAFDNEGPRHQALVRPFEIADRLVSNRDYAAFI ADGGYKSAALWLSDGWAAVQREGWRAPAYWHAREAGAEPPDAAGWQAFGLGGLQALDPDAPVQHLSFFEAAAYAEWAGAR LPTEFEWEAACALPGIAQMLGHVWQWTRSSYDPYPGFRPLPGIASEYNGKFMVGQQVLRGSSLATPRGHARPTYRNFFPP AARWQFTGVRLVRDL >Mature_414_residues TKNELSARTLASTLEREIADVRAHSLELASPLSAEDQALQSMPDASPTKWHLGHTTWFFETVILARHVPGYVPFDERFAY LFNSYYEALGPRHARPQRGMLSRPSLDEVHAYRRHVDARLLELVAGADLPLLVEIAPEITLGLNHEQQHQELLLTDILHA FSLNPLLPAYRADGAAPSLPAGPPAGAPRWLAHAGGIVEIGHDGNGFAFDNEGPRHQALVRPFEIADRLVSNRDYAAFIA DGGYKSAALWLSDGWAAVQREGWRAPAYWHAREAGAEPPDAAGWQAFGLGGLQALDPDAPVQHLSFFEAAAYAEWAGARL PTEFEWEAACALPGIAQMLGHVWQWTRSSYDPYPGFRPLPGIASEYNGKFMVGQQVLRGSSLATPRGHARPTYRNFFPPA ARWQFTGVRLVRDL
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45828; Mature: 45697
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKNELSARTLASTLEREIADVRAHSLELASPLSAEDQALQSMPDASPTKWHLGHTTWFF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEECCCHHHHH ETVILARHVPGYVPFDERFAYLFNSYYEALGPRHARPQRGMLSRPSLDEVHAYRRHVDAR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LLELVAGADLPLLVEIAPEITLGLNHEQQHQELLLTDILHAFSLNPLLPAYRADGAAPSL HHHHHHCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCC PAGPPAGAPRWLAHAGGIVEIGHDGNGFAFDNEGPRHQALVRPFEIADRLVSNRDYAAFI CCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE ADGGYKSAALWLSDGWAAVQREGWRAPAYWHAREAGAEPPDAAGWQAFGLGGLQALDPDA ECCCCCEEEEEECCCHHHHHHCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PVQHLSFFEAAAYAEWAGARLPTEFEWEAACALPGIAQMLGHVWQWTRSSYDPYPGFRPL CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCC PGIASEYNGKFMVGQQVLRGSSLATPRGHARPTYRNFFPPAARWQFTGVRLVRDL CCCHHHCCCEEEEHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCEEEHHHHHHHCC >Mature Secondary Structure TKNELSARTLASTLEREIADVRAHSLELASPLSAEDQALQSMPDASPTKWHLGHTTWFF CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEECCCHHHHH ETVILARHVPGYVPFDERFAYLFNSYYEALGPRHARPQRGMLSRPSLDEVHAYRRHVDAR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LLELVAGADLPLLVEIAPEITLGLNHEQQHQELLLTDILHAFSLNPLLPAYRADGAAPSL HHHHHHCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCC PAGPPAGAPRWLAHAGGIVEIGHDGNGFAFDNEGPRHQALVRPFEIADRLVSNRDYAAFI CCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE ADGGYKSAALWLSDGWAAVQREGWRAPAYWHAREAGAEPPDAAGWQAFGLGGLQALDPDA ECCCCCEEEEEECCCHHHHHHCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PVQHLSFFEAAAYAEWAGARLPTEFEWEAACALPGIAQMLGHVWQWTRSSYDPYPGFRPL CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCC PGIASEYNGKFMVGQQVLRGSSLATPRGHARPTYRNFFPPAARWQFTGVRLVRDL CCCHHHCCCEEEEHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCEEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA