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The map label for this gene is cyoD [H]

Identifier: 238025053

GI number: 238025053

Start: 2144606

End: 2144947

Strand: Reverse

Name: cyoD [H]

Synonym: bglu_2g17090

Alternate gene names: 238025053

Gene position: 2144947-2144606 (Counterclockwise)

Preceding gene: 238025054

Following gene: 238025051

Centisome position: 75.86

GC content: 62.28

Gene sequence:

>342_bases
ATGGCCCATTCGCATACGCATGCGTCGCATGACGACGCCTCGCACGGCACCGTCAGCAGCTACCTGGTCGGGTTCGTGCT
GTCGGTGATCCTGACGGCCGCGTCGTTCGGGGTGGTGCTCGGCGGCTGGTTCTCGACCAACGAAGTCAAGATCCTCGTGC
TGGCCGTGCTGGCCGCGGTGCAGATCGTGGTCCACCTGATCTTCTTCCTGCACATGAACGGCTCGTCGAGCCAGCGCTGG
AACGTGACCGCCTTTGCCTACACGGTGCTGACGGTGGGCATCGTGATCGTCGGTTCGCTGTGGATCATGCACAACGTCAG
CATCAACATGATGTCGCGCTGA

Upstream 100 bases:

>100_bases
GGACGTGCGTCGCCTGACGTGCCTGAGCCTGTTCTGGCACTTCTTGGACATCGTCTGGATCTGCGTGTTTACCTTCGTCT
ACCTCGTGAGTGTGATCTAA

Downstream 100 bases:

>100_bases
TCGAGCGCGGACCCGCCTCGCCCGGGCTGATGGGCGAGGCGGTCGAGAAAAAGCCGCCCCTCGGGGCGGCTTTTTTATTG
GCACGGCGGCAGCCGTGCCG

Product: Ubiquinol oxidase subunit IV

Products: Ubiquinone-8; H2O [C]

Alternate protein names: Ubiquinol oxidase chain D [H]

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MAHSHTHASHDDASHGTVSSYLVGFVLSVILTAASFGVVLGGWFSTNEVKILVLAVLAAVQIVVHLIFFLHMNGSSSQRW
NVTAFAYTVLTVGIVIVGSLWIMHNVSINMMSR

Sequences:

>Translated_113_residues
MAHSHTHASHDDASHGTVSSYLVGFVLSVILTAASFGVVLGGWFSTNEVKILVLAVLAAVQIVVHLIFFLHMNGSSSQRW
NVTAFAYTVLTVGIVIVGSLWIMHNVSINMMSR
>Mature_112_residues
AHSHTHASHDDASHGTVSSYLVGFVLSVILTAASFGVVLGGWFSTNEVKILVLAVLAAVQIVVHLIFFLHMNGSSSQRWN
VTAFAYTVLTVGIVIVGSLWIMHNVSINMMSR

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

Organism=Escherichia coli, GI1786632, Length=111, Percent_Identity=48.6486486486487, Blast_Score=100, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005171
- InterPro:   IPR014210 [H]

Pfam domain/function: PF03626 COX4_pro [H]

EC number: NA

Molecular weight: Translated: 12194; Mature: 12063

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHSHTHASHDDASHGTVSSYLVGFVLSVILTAASFGVVLGGWFSTNEVKILVLAVLAAV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
QIVVHLIFFLHMNGSSSQRWNVTAFAYTVLTVGIVIVGSLWIMHNVSINMMSR
HHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC
>Mature Secondary Structure 
AHSHTHASHDDASHGTVSSYLVGFVLSVILTAASFGVVLGGWFSTNEVKILVLAVLAAV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
QIVVHLIFFLHMNGSSSQRWNVTAFAYTVLTVGIVIVGSLWIMHNVSINMMSR
HHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ubiquinol-8; O(2) [C]

Specific reaction: Ubiquinol-8 + O(2) = Ubiquinone-8 + H2O [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]