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The map label for this gene is ompR [H]

Identifier: 238025051

GI number: 238025051

Start: 2142961

End: 2143698

Strand: Reverse

Name: ompR [H]

Synonym: bglu_2g17080

Alternate gene names: 238025051

Gene position: 2143698-2142961 (Counterclockwise)

Preceding gene: 238025053

Following gene: 238025050

Centisome position: 75.82

GC content: 69.78

Gene sequence:

>738_bases
ATGTCCGATACGCCCATCCAGGTCCTGCTGGTCGACGACGATGCCGCGCTGCGCGATCTGCTCCGTACCTTTTTCCAGCA
GCGCGGCATCGAGGTGTCGGTGCTGCACGACGCCACCACGCTGGAGCGGCGCCTCGAGCGCGAGCGGCCTTCGGTGATCG
TGCTCGACCTGATGATGCCCGGCGTCGACGGGCTGACCGTGCTCAAGCAACTGCGCGCGAGCGGCGACACGATTCCGGTC
ATCATGCTGACGGCGCGCGCCGACGGCGTCGATCGCGTGATCGGCCTCGAACTCGGTGCCGACGACTATCTCGGCAAGCC
GTTCATGCCGCAGGAACTGCTCGCGCGAATCCACGCGGTGCTGCGCCGCCACGCGCCGGCCGGCCTCGCGCGGCCCGCCG
CCGAGCGGCGCGAGCCGCTGCGCTTCGGCCCGTTCCGGCTCGACTTCACCACCCGCACGCTGTATCGCGACACCGAGCCG
CTCAAGCTCACGGGCGGCGAATACGCGCTGCTCGAAGTGTTCGCGACGCATCCGATGGAGACGCTCTCGCGCGCGCGGCT
GCTCGACATGCTGCACGGGCCGTATTCGAACCTGACCGAGCGCGGCATCGACGTGCCGGTCTGGCGCCTGCGCCGCCTGC
TGGAAGACGACCCCGCCCGGCCGCGCTACGTGCAGACGATGCGCGGCGTCGGCTACATGTTCGTGCCTGGCGGCGATGCC
GATGAAACGCCGCTTTGA

Upstream 100 bases:

>100_bases
CGCACCGGCTTCGCTTATAGTCATCGGATTGCACGCCGGCGGGGCCGGCCCTTGCCGCGTCGCGCCTTCCGTTTCCGTTT
CTTACCGCTTTGCCGAGCAC

Downstream 100 bases:

>100_bases
TACGCTGTTCGTCCGGCTGGCGTTGATGGCCATCGGCCTCGTGCTGGTGGTCCACGCGATCGGCCTGGTGCTGCTCGACC
GCGAGCGGCTGCGCCTGGAA

Product: winged helix family two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSDTPIQVLLVDDDAALRDLLRTFFQQRGIEVSVLHDATTLERRLERERPSVIVLDLMMPGVDGLTVLKQLRASGDTIPV
IMLTARADGVDRVIGLELGADDYLGKPFMPQELLARIHAVLRRHAPAGLARPAAERREPLRFGPFRLDFTTRTLYRDTEP
LKLTGGEYALLEVFATHPMETLSRARLLDMLHGPYSNLTERGIDVPVWRLRRLLEDDPARPRYVQTMRGVGYMFVPGGDA
DETPL

Sequences:

>Translated_245_residues
MSDTPIQVLLVDDDAALRDLLRTFFQQRGIEVSVLHDATTLERRLERERPSVIVLDLMMPGVDGLTVLKQLRASGDTIPV
IMLTARADGVDRVIGLELGADDYLGKPFMPQELLARIHAVLRRHAPAGLARPAAERREPLRFGPFRLDFTTRTLYRDTEP
LKLTGGEYALLEVFATHPMETLSRARLLDMLHGPYSNLTERGIDVPVWRLRRLLEDDPARPRYVQTMRGVGYMFVPGGDA
DETPL
>Mature_244_residues
SDTPIQVLLVDDDAALRDLLRTFFQQRGIEVSVLHDATTLERRLERERPSVIVLDLMMPGVDGLTVLKQLRASGDTIPVI
MLTARADGVDRVIGLELGADDYLGKPFMPQELLARIHAVLRRHAPAGLARPAAERREPLRFGPFRLDFTTRTLYRDTEPL
KLTGGEYALLEVFATHPMETLSRARLLDMLHGPYSNLTERGIDVPVWRLRRLLEDDPARPRYVQTMRGVGYMFVPGGDAD
ETPL

Specific function: The N-terminus of this protein is required for the transcriptional expression of both major outer membrane protein genes ompF and ompC; its C-terminal moiety mediates the multimerization of the ompR protein. As a multimer, it turns on the expression of th

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=232, Percent_Identity=47.4137931034483, Blast_Score=226, Evalue=1e-60,
Organism=Escherichia coli, GI1786599, Length=230, Percent_Identity=38.695652173913, Blast_Score=148, Evalue=3e-37,
Organism=Escherichia coli, GI1787229, Length=231, Percent_Identity=36.3636363636364, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1786911, Length=232, Percent_Identity=35.7758620689655, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1788394, Length=240, Percent_Identity=33.3333333333333, Blast_Score=130, Evalue=6e-32,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=31.304347826087, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI2367329, Length=232, Percent_Identity=37.5, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787375, Length=230, Percent_Identity=33.4782608695652, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1790860, Length=225, Percent_Identity=32.8888888888889, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI87082012, Length=231, Percent_Identity=32.4675324675325, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI145693140, Length=233, Percent_Identity=31.7596566523605, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1786784, Length=234, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1789402, Length=227, Percent_Identity=33.4801762114537, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1790552, Length=232, Percent_Identity=34.4827586206897, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1790299, Length=110, Percent_Identity=34.5454545454545, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=35.5140186915888, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1788191, Length=126, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6322000, Length=166, Percent_Identity=28.3132530120482, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27621; Mature: 27490

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTPIQVLLVDDDAALRDLLRTFFQQRGIEVSVLHDATTLERRLERERPSVIVLDLMMP
CCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECC
GVDGLTVLKQLRASGDTIPVIMLTARADGVDRVIGLELGADDYLGKPFMPQELLARIHAV
CCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCHHCCCCCCHHHHHHHHHHH
LRRHAPAGLARPAAERREPLRFGPFRLDFTTRTLYRDTEPLKLTGGEYALLEVFATHPME
HHHCCCCCCCCCCHHHCCCCCCCCEEEEEEHHHHHCCCCCEEECCCCEEEHHHHHHCCHH
TLSRARLLDMLHGPYSNLTERGIDVPVWRLRRLLEDDPARPRYVQTMRGVGYMFVPGGDA
HHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCEEEECCCCC
DETPL
CCCCC
>Mature Secondary Structure 
SDTPIQVLLVDDDAALRDLLRTFFQQRGIEVSVLHDATTLERRLERERPSVIVLDLMMP
CCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECC
GVDGLTVLKQLRASGDTIPVIMLTARADGVDRVIGLELGADDYLGKPFMPQELLARIHAV
CCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCHHCCCCCCHHHHHHHHHHH
LRRHAPAGLARPAAERREPLRFGPFRLDFTTRTLYRDTEPLKLTGGEYALLEVFATHPME
HHHCCCCCCCCCCHHHCCCCCCCCEEEEEEHHHHHCCCCCEEECCCCEEEHHHHHHCCHH
TLSRARLLDMLHGPYSNLTERGIDVPVWRLRRLLEDDPARPRYVQTMRGVGYMFVPGGDA
HHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCEEEECCCCC
DETPL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]