| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025027
Identifier: 238025027
GI number: 238025027
Start: 2111069
End: 2112040
Strand: Direct
Name: 238025027
Synonym: bglu_2g16840
Alternate gene names: NA
Gene position: 2111069-2112040 (Clockwise)
Preceding gene: 238025026
Following gene: 238025033
Centisome position: 74.67
GC content: 72.74
Gene sequence:
>972_bases GTGAAAGACCTCTCGCACATCGACCGATCCTGCGTCGCTCCGCGGCCCCGGTTCCGCGATCTGTGGTTCGGCCCCGCCGG GCTGCGCAGCGGCTGGGCGGCACTGCTCTACGCGGCGATCGTGGCCGCCCTGCTGGCGCTGGCCGATCTGGCCGCCGCGC GTTTCGATCTGCCGTTCCGGCTGCAGGGCAATCTCAAGGCGGGCCATCAGTTCTTATTCGAGCTCGCGATGGGCGGCGCG GTGCTGATCGCCACGCGCGTGATGAGCCGCGTCGACGGGCGCTCGTGGCTCGATTTCGGCCTGCAGGCCTCCGACCGCGC CCGGCATCTGCTGCTTGGCGGCCTGTGCGGGCTCATCGCCGTCTCGGCGATCATGGCGCTGCTGGTGGTCACGGGCGGCA CCACGCTGACCTATTCGGGCGGCAGCTTCGCGGCCGCGCTCGGAGCGGGCCTGACCTGGGCGCTCGTGTTCGCGCTGCTG GCCGCCGCCGAGGAACTCGCGTTTCACGGCTACGTGTTCTTCCGGCTCGCGCGCGGCACGCATCCGGCCGTGGCCGCCGT GCTGACCTCGCTCGCGTTCGGCCTCTCGCACATTTCCAATCACGGCGAGAACCTCGGCGGCATCGTGCCGACGGTGATCT ACGGCTTCGTCGCCAGCCTCGCGATCTGGCGCACCGGCTCGCTCTGGTGGGTATTCGGCATGCATGCGACCTGGGACTGG GCCGAGTCGTTCCTGTTCGGTGCGCCCACCAGCGGCCTGATACCGGCCCAGAGCCTGCTCGAAAGCCACGCGGTGGGGCC GGTCTGGCTCAGTGGCGGCACGGTCGGCCCCGAGGGCAGCGTGCTGGTGTTCCCGGCGCTCGGCGCGCTCGCCTGGTTCG CCTGGCGCGCGCTGCCGGCGCGGACCGGCAGCGCGCGCGACGCGGCCGCGCCGCACCGGCCGGTCCAGGGCCGCGCCGGC CGCGCGGGCTGA
Upstream 100 bases:
>100_bases ACGAAAATTCGCTGGCGTGCATCGAACGGCCTTCAATTCGCCTACAACGCACCCGGCGATCCGTTGGCTGGCGCCATCAC AAGGAACGAGGACCTACCCG
Downstream 100 bases:
>100_bases GCGCGGCCTCCGGCCGGGCGCCTGCGCCGGCGCGCTGCGAGTTGGCGATCGCCCGGCCCGCAGCGGGCCCGTGCCGTGGC TGCGCCGGCCTTGCGCTGCA
Product: CAAX amino terminal protease family protein
Products: NA
Alternate protein names: CAAX Amino Terminal Protease Family Protein; Protease CAAX Amino Terminal Family
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKDLSHIDRSCVAPRPRFRDLWFGPAGLRSGWAALLYAAIVAALLALADLAAARFDLPFRLQGNLKAGHQFLFELAMGGA VLIATRVMSRVDGRSWLDFGLQASDRARHLLLGGLCGLIAVSAIMALLVVTGGTTLTYSGGSFAAALGAGLTWALVFALL AAAEELAFHGYVFFRLARGTHPAVAAVLTSLAFGLSHISNHGENLGGIVPTVIYGFVASLAIWRTGSLWWVFGMHATWDW AESFLFGAPTSGLIPAQSLLESHAVGPVWLSGGTVGPEGSVLVFPALGALAWFAWRALPARTGSARDAAAPHRPVQGRAG RAG
Sequences:
>Translated_323_residues MKDLSHIDRSCVAPRPRFRDLWFGPAGLRSGWAALLYAAIVAALLALADLAAARFDLPFRLQGNLKAGHQFLFELAMGGA VLIATRVMSRVDGRSWLDFGLQASDRARHLLLGGLCGLIAVSAIMALLVVTGGTTLTYSGGSFAAALGAGLTWALVFALL AAAEELAFHGYVFFRLARGTHPAVAAVLTSLAFGLSHISNHGENLGGIVPTVIYGFVASLAIWRTGSLWWVFGMHATWDW AESFLFGAPTSGLIPAQSLLESHAVGPVWLSGGTVGPEGSVLVFPALGALAWFAWRALPARTGSARDAAAPHRPVQGRAG RAG >Mature_323_residues MKDLSHIDRSCVAPRPRFRDLWFGPAGLRSGWAALLYAAIVAALLALADLAAARFDLPFRLQGNLKAGHQFLFELAMGGA VLIATRVMSRVDGRSWLDFGLQASDRARHLLLGGLCGLIAVSAIMALLVVTGGTTLTYSGGSFAAALGAGLTWALVFALL AAAEELAFHGYVFFRLARGTHPAVAAVLTSLAFGLSHISNHGENLGGIVPTVIYGFVASLAIWRTGSLWWVFGMHATWDW AESFLFGAPTSGLIPAQSLLESHAVGPVWLSGGTVGPEGSVLVFPALGALAWFAWRALPARTGSARDAAAPHRPVQGRAG RAG
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33950; Mature: 33950
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLSHIDRSCVAPRPRFRDLWFGPAGLRSGWAALLYAAIVAALLALADLAAARFDLPFR CCCHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LQGNLKAGHQFLFELAMGGAVLIATRVMSRVDGRSWLDFGLQASDRARHLLLGGLCGLIA EECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHH VSAIMALLVVTGGTTLTYSGGSFAAALGAGLTWALVFALLAAAEELAFHGYVFFRLARGT HHHHHHHHHHCCCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEHHHCCC HPAVAAVLTSLAFGLSHISNHGENLGGIVPTVIYGFVASLAIWRTGSLWWVFGMHATWDW CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH AESFLFGAPTSGLIPAQSLLESHAVGPVWLSGGTVGPEGSVLVFPALGALAWFAWRALPA HHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHCC RTGSARDAAAPHRPVQGRAGRAG CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKDLSHIDRSCVAPRPRFRDLWFGPAGLRSGWAALLYAAIVAALLALADLAAARFDLPFR CCCHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LQGNLKAGHQFLFELAMGGAVLIATRVMSRVDGRSWLDFGLQASDRARHLLLGGLCGLIA EECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHH VSAIMALLVVTGGTTLTYSGGSFAAALGAGLTWALVFALLAAAEELAFHGYVFFRLARGT HHHHHHHHHHCCCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEHHHCCC HPAVAAVLTSLAFGLSHISNHGENLGGIVPTVIYGFVASLAIWRTGSLWWVFGMHATWDW CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH AESFLFGAPTSGLIPAQSLLESHAVGPVWLSGGTVGPEGSVLVFPALGALAWFAWRALPA HHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHCC RTGSARDAAAPHRPVQGRAGRAG CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA